Control of Cheese Microflora using Bacteriocins.

End of Project ReportBacteriocins are proteins, produced by some bacteria which are capable of inhibiting other bacteria. The overall aim of this project was the development and exploitation of bacteriocins such as Lacticin 3147 (produced by a food-grade microorganism), as biological tools to control the microflora of foods. Lacticin 3147-producing strains were evaluated for their ability to improve the microbial quality of a variety of dairy products and in particular, Cheddar cheese. The manipulation of cheese flora using bacteriocins should offer manufacturers greater control in the consistency and quality of the final product, in addition to improving its safety. In concert with these studies, Lacticin 3147 was studied in detail at the molecular level resulting in its biochemical and genetic analysis. These studies have demonstrated the complexity and uniqueness of this potent antimicrobial.Department of Agriculture, Food and the Marin

Use of Bacteriocins to Improve Cheese Quality and Safety

End of Project ReportThe objectives of this project were to generate, characterise and exploit a range of novel bacteriocin producing starter cultures to improve both the safety and the quality of fermented dairy foods. The main conclusions were as follows: Lacticin 3147 is a broad spectrum bacteriocin which inhibits a wide range of Gram-positive bacteria including lactobacilli, clostridia and Listeria. The bacteriocin has been purified by chromatographic procedures and has been shown to be composed of two peptides, both of which are required for biological activity. The mechanism of action of lacticin 3147 has been elucidated. The entire plasmid encoding lacticin 3147 has been sequenced and the bacteriocin in distinct from any previously characterised lactococcal bacteriocin. The Food Grade introduction of the bacteriocin genes into cheese starters was carried out. Lacticin 3147 producing starters have been used to control the pathogen Listeria monocytogenes on the surface of mould ripened cheese. Lacticin 3147 producing starters have been used to control the non-starter lactic acid bacteria complement in Cheddar cheese during the ripening process. A novel starter system using a bacteriocin (lactococcin)- producing adjunct has been designed which gives increased cell lysis during Cheddar cheese manufacture while ensuring that efficient acid production is not compromised. In summary these studies have found that naturally occurring antimicrobials such as bacteriocins have a wide range of applications in the food industry for improving both the quality and safety of fermented dairy products.Department of Agriculture, Food and the Marin

Phenotypic consequences of somatic mutations in the ataxia-telangiectasia mutated gene in non-small cell lung cancer

Mutations in the Ataxia-telangiectasia mutated (ATM) gene are frequently found in human cancers, including non-small cell lung cancer (NSCLC). Loss of ATM function confers sensitivity to ionising radiation (IR) and topoisomerase inhibitors and may thus define a subset of cancer patients that could get increased benefit from these therapies. In this study, we evaluated the phenotypic consequences of ATM missense changes reported in seven NSCLC cell lines with regard to radiosensitivity and functionality of ATM signalling. Our data demonstrate that only 2/7 NSCLC cell lines (H1395 and H23) harbouring ATM missense mutations show a functional impairment of ATM signalling following IR-exposure. In these two cell lines, the missense mutations caused a significant reduction in ATM protein levels, impairment of ATM signalling and marked radiosensitivity. Of note, only cell lines with homozygous mutations in the ATM gene showed significant impairment of ATM function. Based on these observations, we developed an immunohistochemistry-based assay to identify patients with loss or reduction of ATM protein expression in a clinical setting. In a set of 137 NSCLC and 154 colorectal cancer specimens we identified tumoral loss of ATM protein expression in 9.5% and 3.9% of cases, respectively, demonstrating the potential utility of this method

Panoramic SETI: overall focal plane electronics and timing and network protocols

The PANOSETI experiment is an all-sky, all-the-time visible search for nanosecond to millisecond time-scale transients. The experiment will deploy observatory domes at several sites, each dome containing ~45 telescopes and covering ~4,440 square degrees. Here we describe the focal-plane electronics for the visible wavelength telescopes, each of which contains a Mother Board and four Quadrant Boards. On each quadrant board, 256 silicon photomultiplier (SiPM) photon detectors are arranged to measure pulse heights to search for nanosecond time-scale pulses. To simultaneously examine pulse widths over a large range of time scales (nanoseconds to milliseconds), the instrument implements both a Continuous Imaging Mode (CI-Mode) and a Pulse Height Mode (PH-Mode). Precise timing is implemented in the gateware with the White Rabbit protocol

Panoramic SETI: on-sky results from prototype telescopes and instrumental design

The Panoramic SETI (Search for Extraterrestrial Intelligence) experiment (PANOSETI) aims to detect and quantify optical transients from nanosecond to second precision over a large field-of-view (∼4,450 square-degrees). To meet these challenging timing and wide-field requirements, the PANOSETI experiment will use two assemblies of ∼45 telescopes to reject spurious signals by coincidence detection, each one comprising custom-made fast photon-counting hardware combined with (f/1.32) focusing optics. Preliminary on-sky results from pairs of PANOSETI prototype telescopes (100 sq.deg.) are presented in terms of instrument performance and false alarm rates. We found that a separation of >1 km between telescopes surveying the same field-of-view significantly reduces the number of false positives due to nearby sources (e.g., Cherenkov showers) in comparison to a side- by-side configuration of telescopes. Design considerations on the all-sky PANOSETI instrument and expected field-of-views are reported

The Lantern Vol. 76, No. 1, Fall 2008

• Cruel • A Night in Three Parts • The Moment I Said It • To Know • I Will Never Skipskipskip a Rock • The Ravine • Untitled • Skeleton • Midnight Letter • Where Children Come From • Orphan of War • Ciega / Mezquita • The Other Side • Those Dancing Days are Gone • Cycling • The 2nd of July • The Tantric Semantics of Studying Abroad • A Three-Part Study in Musical Relations • Amway Man • Hard Luck Investigator • Spring • Interview With Poet Eleanor Wilnerhttps://digitalcommons.ursinus.edu/lantern/1173/thumbnail.jp

Panoramic SETI: Program Update and High-Energy Astrophysics Applications

Optical SETI (Search for Extraterrestrial Intelligence) instruments that can explore the very fast time domain, especially with large sky coverage, offer an opportunity for new discoveries that can complement multimessenger and time domain astrophysics. The Panoramic SETI experiment (PANOSETI) aims to observe optical transients with nanosecond to second duration over a wide field-of-view ($\thicksim$2,500 sq.deg.) by using two assemblies of tens of telescopes to reject spurious signals by coincidence detection. Three PANOSETI telescopes, connected to a White Rabbit timing network used to synchronize clocks at the nanosecond level, have been deployed at Lick Observatory on two sites separated by a distance of 677 meters to distinguish nearby light sources (such as Cherenkov light from particle showers in the Earth's atmosphere) from astrophysical sources at large distances. In parallel to this deployment, we present results obtained during four nights of simultaneous observations with the four 12-meter VERITAS gamma-ray telescopes and two PANOSETI telescopes at the Fred Lawrence Whipple Observatory. We report PANOSETI's first detection of astrophysical gamma rays, comprising three events with energies in the range between $\thicksim$15 TeV and $\thicksim$50 TeV. These were emitted by the Crab Nebula, and identified as gamma rays using joint VERITAS observations.Comment: 9 pages, 5 figures, SPIE Astronomical Telescopes + Instrumentation conference, 2022, Montr\'eal, Qu\'ebec, Canad

Vegetation Cover Analysis of Hazardous Waste Sites in Utah and Arizona Using Hyperspectral Remote Sensing

This study investigated the usability of hyperspectral remote sensing for characterizing vegetation at hazardous waste sites. The specific objectives of this study were to: (1) estimate leaf-area-index (LAI) of the vegetation using three different methods (i.e., vegetation indices, red-edge positioning (REP), and machine learning regression trees), and (2) map the vegetation cover using machine learning decision trees based on either the scaled reflectance data or mixture tuned matched filtering (MTMF)-derived metrics and vegetation indices. HyMap airborne data (126 bands at 2.3 x 2.3 m spatial resolution), collected over the U. S. Department of Energy uranium processing sites near Monticello, Utah and Monument Valley, Arizona, were used. Grass and shrub species were mixed on an engineered disposal cell cover at the Monticello site while shrub species were dominant in the phytoremediation plantings at the Monument Valley site. Regression trees resulted in the best calibration performance of LAI estimation (R-2 > 0.80. The use of REPs failed to accurately predict LAI (R-2 < 0.2). The use of the MTMF-derived metrics (matched filter scores and infeasibility) and a range of vegetation indices in decision trees improved the vegetation mapping when compared to the decision tree classification using just the scaled reflectance. Results suggest that hyperspectral imagery are useful for characterizing biophysical characteristics (LAI) and vegetation cover on capped hazardous waste sites. However, it is believed that the vegetation mapping would benefit from the use of higher spatial resolution hyperspectral data due to the small size of many of the vegetation patches (<1 m) found on the sites.open111

Performance of the CMS Cathode Strip Chambers with Cosmic Rays

The Cathode Strip Chambers (CSCs) constitute the primary muon tracking device in the CMS endcaps. Their performance has been evaluated using data taken during a cosmic ray run in fall 2008. Measured noise levels are low, with the number of noisy channels well below 1%. Coordinate resolution was measured for all types of chambers, and fall in the range 47 microns to 243 microns. The efficiencies for local charged track triggers, for hit and for segments reconstruction were measured, and are above 99%. The timing resolution per layer is approximately 5 ns