Effect of plasmid replication deregulation via inc mutations on E. coli proteome & simple flux model analysis

When the replication of a plasmid based on sucrose selection is deregulated via the inc1 and inc2 mutations, high copy numbers (7,000 or greater) are attained while the growth rate on minimal medium is negligibly affected. Adaptions were assumed to be required in order to sustain the growth rate. Proteomics indicated that indeed a number of adaptations occurred that included increased expression of ribosomal proteins and 2-oxoglutarate dehydrogenase. The operating space prescribed by a basic flux model that maintained phenotypic traits (e.g. growth, byproducts, etc.) within typical bounds of resolution was consistent with the flux implications of the proteomic changes

(Review article*) Permaculture: Smart Growth Strategies and Management for Juniper Forest

Permaculture creates an integrated system by incorporating those parameters which are often viewed as separate entities such as smart growth, low-impact development, habitat protection, complete streets, and other initiatives. Its gives better planning options and give policies a line of coherence and directions which provides basis for the real concept of sustainability. Presently in Pakistan, forest management policies suffer from a number of drawbacks and especially the Juniper forests in Pakistan are under constant pressure due to natural as well as anthropogenic pressures. To conserve the Juniper Forest Ecosystem a proposed Smart Growth Strategies based on Permaculture’s principles are designed to protect the Ziarat Juniper Forest that offers an unequivocal vision and strategy to gain valid sustainability in forest management

Studies on serum macro and micro minerals status in repeat breeder and normal cyclic Nili-Ravi buffaloes and their treatment strategies

The present study was carried out with the objective to know the calcium (Ca), inorganic phosphorus (P), magnesium (Mg), copper (Cu), iron (Fe) and zinc (Zn) concentrations in serum of repeat breeder and normal cyclic buffaloes during oestrus. On the day of estrus, blood samples were collected from 35 buffaloes with a history of repeat breeding (RB) and 35 normal cycling (NC) buffaloes for mineral estimation. In the second part of the study, 35 repeat breeder (RBS) buffaloes were treated with a mineral mixture given orally for 10 days at the dosage rate of 150 g per day whereas other 35 repeat breeder buffaloes were given no mineral mixture (RBC). The overall pregnancy rate as well as 1st, 2nd and 3rd service pregnancy rate was calculated. The serum calcium, inorganic phosphorus, magnesium, copper, iron and zinc concentrations were significantly lower (P < 0.01) in RB buffaloes as compared to NC buffaloes. Sodium concentrations differed non-significantly between repeat breeder and normal cyclic buffaloes. Repeat breeder buffaloes (RBS) when fed orally 150 g per day of the mineral mixture for 10 days, the 1st, 2nd and 3rd service pregnancy rates were 42, 25 and 20%, while, overall pregnancy rate in these animals was 87%; whereas in repeat breeder control buffaloes, the overall pregnancy rate was 21%. In conclusion, the concentrations of macro and micro minerals were significantly lower in repeat breeder buffaloes and mineral mixtures should be added in the food stuff to improve reproductive efficiency of repeat breeder buffaloes. Keywords: Buffalo, repeat breeder, minerals, pregnancy rateAfrican Journal of Biotechnology, Vol. 13(10), pp. 1143-1146, 5 March, 201

Effect of lecirelin acetate, hCG or progesterone administration on day 7 post-insemination on conception rate and progesterone concentration in cross-bred cattle

The present study was designed to evaluate the effect of administration of lecirelin acetate, hCG and progesterone after AI on ovarian picture, serum progesterone concentrations and first service conception rate in cross-bred cattle. A total of 160 lactating cross bred (Friesian x Sahiwal) cattle were divided into 4 groups after AI. The groups were treated as follows: control (injected i.m with normal saline 2ml, n=40), d 7-LA (injected i.m with lecirelin acetate100 µg, n=40), d 7-hCG (injected with hCG 3300 IU, n=40) and d 7-P4 (injected i.m with Progesterone 0.5 mgdaily for 4 days, n=40) group. The hormonal treatments were given to animals on day 7 after AI. The ultrasonography and blood sampling was done before treatment and then 7 days later. All animals were examined for pregnancy through ultrasonography at 40 ± 1 day after AI. The diameter of SCL on 7 days after treatment was higher (P 4 treated cows did not differ from control cows. Formation of ACL was observed only in 50 % & 80 % cows in d 7-LA and d 7-hCG group respectively. No ACL was observed in control and d 7- P4 cattle on day 7 after treatment. The P4 concentrations were significantly higher (P 0.05) difference in FSCR was observed between control and d 7-P4 group. It was concluded that the use of hCG or LA, 7 days after AI is a beneficial tool to improve conception rate in cross-bred cattle whereas use of parental P4 post-breeding has no effect on SCL diameter and conception rate

Remaining idle time aware intelligent channel bonding schemes for cognitive radio sensor networks

Channel bonding (CB) is a technique used to provide larger bandwidth to users. It has been applied to various networks such as wireless local area networks, wireless sensor networks, cognitive radio networks, and cognitive radio sensor networks (CRSNs). The implementation of CB in CRSNs needs special attention as primary radio (PR) nodes traffic must be protected from any harmful interference by cognitive radio (CR) sensor nodes. On the other hand, CR sensor nodes need to communicate without interruption to meet their data rate requirements and conserve energy. If CR nodes perform frequent channel switching due to PR traffic then it will be difficult to meet their quality of service and data rate requirements. So, CR nodes need to select those channels which are stable. By stable, we mean those channels which having less PR activity or long remaining idle time and cause less harmful interference to PR nodes. In this paper, we propose two approaches remaining idle time aware intelligent channel bonding (RITCB) and remaining idle time aware intelligent channel bonding with interference prevention (RITCB-IP) for cognitive radio sensor networks which select stable channels for CB which have longest remaining idle time. We compare our approaches with four schemes such as primary radio user activity aware channel bonding scheme, sample width algorithm, cognitive radio network over white spaces and AGILE. Simulation results show that our proposed approaches RITCB and RITCB-IP decrease harmful interference and increases the life time of cognitive radio sensor nodes

Elective Cancer Surgery in COVID-19-Free Surgical Pathways During the SARS-CoV-2 Pandemic: An International, Multicenter, Comparative Cohort Study.

PURPOSE: As cancer surgery restarts after the first COVID-19 wave, health care providers urgently require data to determine where elective surgery is best performed. This study aimed to determine whether COVID-19-free surgical pathways were associated with lower postoperative pulmonary complication rates compared with hospitals with no defined pathway. PATIENTS AND METHODS: This international, multicenter cohort study included patients who underwent elective surgery for 10 solid cancer types without preoperative suspicion of SARS-CoV-2. Participating hospitals included patients from local emergence of SARS-CoV-2 until April 19, 2020. At the time of surgery, hospitals were defined as having a COVID-19-free surgical pathway (complete segregation of the operating theater, critical care, and inpatient ward areas) or no defined pathway (incomplete or no segregation, areas shared with patients with COVID-19). The primary outcome was 30-day postoperative pulmonary complications (pneumonia, acute respiratory distress syndrome, unexpected ventilation). RESULTS: Of 9,171 patients from 447 hospitals in 55 countries, 2,481 were operated on in COVID-19-free surgical pathways. Patients who underwent surgery within COVID-19-free surgical pathways were younger with fewer comorbidities than those in hospitals with no defined pathway but with similar proportions of major surgery. After adjustment, pulmonary complication rates were lower with COVID-19-free surgical pathways (2.2% v 4.9%; adjusted odds ratio [aOR], 0.62; 95% CI, 0.44 to 0.86). This was consistent in sensitivity analyses for low-risk patients (American Society of Anesthesiologists grade 1/2), propensity score-matched models, and patients with negative SARS-CoV-2 preoperative tests. The postoperative SARS-CoV-2 infection rate was also lower in COVID-19-free surgical pathways (2.1% v 3.6%; aOR, 0.53; 95% CI, 0.36 to 0.76). CONCLUSION: Within available resources, dedicated COVID-19-free surgical pathways should be established to provide safe elective cancer surgery during current and before future SARS-CoV-2 outbreaks

Whole-genome sequencing reveals host factors underlying critical COVID-19

Critical COVID-19 is caused by immune-mediated inflammatory lung injury. Host genetic variation influences the development of illness requiring critical care1 or hospitalization2–4 after infection with SARS-CoV-2. The GenOMICC (Genetics of Mortality in Critical Care) study enables the comparison of genomes from individuals who are critically ill with those of population controls to find underlying disease mechanisms. Here we use whole-genome sequencing in 7,491 critically ill individuals compared with 48,400 controls to discover and replicate 23 independent variants that significantly predispose to critical COVID-19. We identify 16 new independent associations, including variants within genes that are involved in interferon signalling (IL10RB and PLSCR1), leucocyte differentiation (BCL11A) and blood-type antigen secretor status (FUT2). Using transcriptome-wide association and colocalization to infer the effect of gene expression on disease severity, we find evidence that implicates multiple genes—including reduced expression of a membrane flippase (ATP11A), and increased expression of a mucin (MUC1)—in critical disease. Mendelian randomization provides evidence in support of causal roles for myeloid cell adhesion molecules (SELE, ICAM5 and CD209) and the coagulation factor F8, all of which are potentially druggable targets. Our results are broadly consistent with a multi-component model of COVID-19 pathophysiology, in which at least two distinct mechanisms can predispose to life-threatening disease: failure to control viral replication; or an enhanced tendency towards pulmonary inflammation and intravascular coagulation. We show that comparison between cases of critical illness and population controls is highly efficient for the detection of therapeutically relevant mechanisms of disease