42 research outputs found
Invasive oysters as new hosts for native shell-boring polychaetes: Using historical shell collections and recent field data to investigate parasite spillback in native mussels in the Dutch Wadden Sea
Biological invasions can have manifold effects on native biota, including impacts on species interactions in invaded ecosystems. Among those are effects on parasite-host interactions, for example in cases where invaders serve as a new host for native parasites, leading to an amplification of the parasite population which may ultimately result in increased infection levels in the original native hosts (parasite spillback). In this study, we investigated the potential spillback of the native shell-boring polychaete Polydora ciliata from invasive Pacific oysters (Crassostrea (Magallana) gigas) to native mussels (Mytilus edulis) in the Dutch Wadden Sea. A field survey in the intertidal revealed that the majority of P. ciliata can nowadays be found in the shells of live but also dead Pacific oysters and much less in shells of other potential host species: mussels and periwinkles (Littorina littorea). Using a unique historical shell collection based on long-term sampling programmes in the intertidal and subtidal of the western Dutch Wadden Sea, we compared P. ciliata infections in mussels before and after the invasion of the Pacific oyster by means of x-ray scans. Both for the intertidal and subtidal, we did not detect differences in prevalence of P. ciliata in mussels between pre- and post-invasion periods. This suggests that the invasion of the Pacific oyster may not have caused a strong spillback to mussels regarding P. ciliata and thus the invasion probably had little indirect infection-mediated effects on the condition and fitness of native mussels. Instead, the acquisition of native P. ciliata by the invasive oysters suggests that they may themselves be affected by the new infections and this may warrant further research
Spread of the invasive shell-boring annelid Polydora websteri (Polychaeta, Spionidae) into naturalised oyster reefs in the European Wadden Sea
With globally growing aquaculture activities, the co-introduction of parasites alongside large-scale movements of commercial species poses an increasing risk for marine ecosystems. Here, we present the first record of the shell-boring polychaete Polydora websteri Hartman in Loosanoff and Engle, 1943 in invasive Pacific oysters Crassostrea (Magallana) gigas (Thunberg, 1793) in the European Atlantic Ocean. In October 2014, mud blisters in the shells of wild Pacific oysters and specimens of a spionid polychaete were observed in close proximity to a commercial oyster farm at the island of Sylt (Germany) in the European Wadden Sea. Subsequent investigations indicated that these blisters only occurred near the farm and that no other mollusc species were affected. Morphological and molecular analysis identified the polychaete as Polydora websteri, a species that nowadays widely occurs around the globe, but likely is native to the Asian Pacific. Later sampling activities detected P. websteri also at other locations around Sylt as well as in the Dutch part of the Wadden Sea at the island of Texel. The number of polychaetes in the oysters was, however, relatively low and mostly below 10 individuals per oyster. Together, this evidence suggests that P. websteri is currently extending its range. As the introduction of P. websteri may have severe ecological and economic implications, this study aims to alert others to look for P. websteri at Western European coasts within farmed or wild Pacific oysters to further document its spread
The genetic architecture of the human cerebral cortex
The cerebral cortex underlies our complex cognitive capabilities, yet little is known about the specific genetic loci that influence human cortical structure. To identify genetic variants that affect cortical structure, we conducted a genome-wide association meta-analysis of brain magnetic resonance imaging data from 51,665 individuals. We analyzed the surface area and average thickness of the whole cortex and 34 regions with known functional specializations. We identified 199 significant loci and found significant enrichment for loci influencing total surface area within regulatory elements that are active during prenatal cortical development, supporting the radial unit hypothesis. Loci that affect regional surface area cluster near genes in Wnt signaling pathways, which influence progenitor expansion and areal identity. Variation in cortical structure is genetically correlated with cognitive function, Parkinson's disease, insomnia, depression, neuroticism, and attention deficit hyperactivity disorder
Stroke genetics informs drug discovery and risk prediction across ancestries
Previous genome-wide association studies (GWASs) of stroke — the second leading cause of death worldwide — were conducted predominantly in populations of European ancestry1,2. Here, in cross-ancestry GWAS meta-analyses of 110,182 patients who have had a stroke (five ancestries, 33% non-European) and 1,503,898 control individuals, we identify association signals for stroke and its subtypes at 89 (61 new) independent loci: 60 in primary inverse-variance-weighted analyses and 29 in secondary meta-regression and multitrait analyses. On the basis of internal cross-ancestry validation and an independent follow-up in 89,084 additional cases of stroke (30% non-European) and 1,013,843 control individuals, 87% of the primary stroke risk loci and 60% of the secondary stroke risk loci were replicated (P < 0.05). Effect sizes were highly correlated across ancestries. Cross-ancestry fine-mapping, in silico mutagenesis analysis3, and transcriptome-wide and proteome-wide association analyses revealed putative causal genes (such as SH3PXD2A and FURIN) and variants (such as at GRK5 and NOS3). Using a three-pronged approach4, we provide genetic evidence for putative drug effects, highlighting F11, KLKB1, PROC, GP1BA, LAMC2 and VCAM1 as possible targets, with drugs already under investigation for stroke for F11 and PROC. A polygenic score integrating cross-ancestry and ancestry-specific stroke GWASs with vascular-risk factor GWASs (integrative polygenic scores) strongly predicted ischaemic stroke in populations of European, East Asian and African ancestry5. Stroke genetic risk scores were predictive of ischaemic stroke independent of clinical risk factors in 52,600 clinical-trial participants with cardiometabolic disease. Our results provide insights to inform biology, reveal potential drug targets and derive genetic risk prediction tools across ancestries
Parasitism enhances gastropod feeding on invasive and native algae while altering essential energy reserves for organismal homeostasis upon warming
Highlights:
• Trematodes can affect gastropods' biochemical condition and grazing rates
• L. littorea fed more on invasive G. vermiculophylla than on native F. vesiculosus
• Trematode-infected snails fed on average 18 % more than uninfected snails
• An increase in temperature induced the mobilization of energy reserves
• Trematode-induced glycogen decrease might reduce gastropod heat stress tolerance
Abstract:
Marine bioinvasions are of increasing attention due to their potential of causing ecological and economic loss. The seaweed Gracilaria vermiculophylla has recently invaded the Baltic Sea, where, under certain conditions, it was found to outcompete the native alga Fucus vesiculosus. Parasites of grazers and temperature are among the potential factors which might indirectly modulate the interactions between these co-occurring algae through their single and combined effects on grazing rates. We tested the temperature and parasitism effects on the feeding of the gastropod Littorina littorea on F. vesiculosus vs. G. vermiculophylla. Uninfected and trematode-infected gastropods were exposed to 10, 16, 22, and 28 center dot C for 4 days while fed with either algae. Faeces production was determined as a proxy for grazing rate, and HSP70 expression, glycogen and lipid concentrations were used to assess the gastropod's biochemical condition. Gracilaria vermiculophylla was grazed more than F. vesiculosus. Trematode infection significantly enhanced faeces production, decreased glycogen concentrations, and increased lipid concentrations in the gastropod. Warming significantly affected glycogen and lipid concentrations, with glycogen peaking at 16 center dot C and lipids at 22 center dot C. Although not significant, warming and trematode infection increased HSP70 levels. Increased faeces production in infected snails and higher faeces production by L. littorea fed with G. vermiculophylla compared to those which fed on F. vesiculosus, suggest parasitism as an important indirect modulator of the interaction between these algae. The changes in the gastropod's biochemical condition indicate that thermal stress induced the mobilization of energy reserves, suggesting a possible onset of compensatory metabolism. Finally, glycogen decrease in infected snails compared to uninfected ones might make them more susceptible to thermal stress
CLASSICA: Validating artificial intelligence in classifying cancer in real time during surgery
<p>We present the Study Protocol for the <a href="https://classicaproject.eu/">CLASSICA project</a>.</p><h2>Abstract</h2><h3>Aim</h3><p>Treatment pathways for significant rectal polyps differ depending on the underlying pathology, but pre-excision profiling is imperfect. It has been demonstrated that differences in fluorescence perfusion signals following injection of indocyanine green (ICG) can be analysed mathematically and, with the assistance of artificial intelligence (AI), used to classify tumours endoscopically as benign or malignant. This study aims to validate this method of characterization across multiple clinical sites regarding its generalizability, usability and accuracy while developing clinical-grade software to enable it to become a useful method.</p><h3>Methods</h3><p>The CLASSICA study is a prospective, unblinded multicentre European observational study aimed to validate the use of AI analysis of ICG fluorescence for intra-operative tissue characterization. Six hundred patients undergoing transanal endoscopic evaluation of significant rectal polyps and tumours will be enrolled in at least five clinical sites across the European Union over a 4-year period. Video recordings will be analysed regarding dynamic fluorescence patterns centrally as software is developed to enable analysis with automatic classification to happen locally. AI-based classification and subsequently guided intervention will be compared with the current standard of care including biopsies, final specimen pathology and patient outcomes.</p><h3>Discussion</h3><p>CLASSICA will validate the use of AI in the analysis of ICG fluorescence for the purposes of classifying significant rectal polyps and tumours endoscopically. Follow-on studies will compare AI-guided targeted biopsy or, indeed, AI characterization alone with traditional biopsy and AI-guided local excision versus traditional excision with regard to marginal clearance and recurrence.</p><p>No identifiable patient data are contained in this manuscript.</p><p>This trial has been registered at <a href="http://clinicaltrials.gov/">clinicaltrials.gov</a> (Identifier NCT05793554).</p><p>This manuscript details version 3.5 of the protocol as approved by all clinical partners on 7 February 2023 and submitted to the relevant local ethical committees and funding body. The study protocol was written by A Moynihan (Clinical Research Fellow at UCD) under the supervision of Professor Ronan Cahill and with input from co-lead investigators at each clinical site. University College Dublin Clinical Research Centre, Ireland, is trial sponsor (contact at <a href="mailto:[email protected]">[email protected]</a>).</p>
Data presented in the paper "Invasive oysters as new hosts for native shell-boring polychaetes: using historical shell collections and recent field data to investigate parasite spillback in native mussels in the Dutch Wadden Sea"
Research objective: We investigated the potential spillback of the native shell-boring polychaete Polydora ciliata from invasive Pacific oysters (Crassostrea (Magallana) gigas) to native mussels (Mytilus edulis) in the Dutch Wadden Sea by means of a field survey and historical collections of M. edulis shells. Type of research, method & collection of data:We sampled dead and alive specimens of blue mussels, Pacific oysters and periwinkles (Littorina littorea) at three intertidal locations at the Wadden Sea island Texel in order to determine host preferences of P. ciliata. To test, whether P. ciliata infections in mussels changed after the invasion of the Pacific oyster, we analysed x-ray images for P. ciliata burrows in mussel shells stemming from long-term monitoring campaigns from intertidal and subtidal areas of the western Dutch Wadden Sea