108 research outputs found

    Resource limitation drives spatial organization in microbial groups.

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    Dense microbial groups such as bacterial biofilms commonly contain a diversity of cell types that define their functioning. However, we have a limited understanding of what maintains, or purges, this diversity. Theory suggests that resource levels are key to understanding diversity and the spatial arrangement of genotypes in microbial groups, but we need empirical tests. Here we use theory and experiments to study the effects of nutrient level on spatio-genetic structuring and diversity in bacterial colonies. Well-fed colonies maintain larger well-mixed areas, but they also expand more rapidly compared with poorly-fed ones. Given enough space to expand, therefore, well-fed colonies lose diversity and separate in space over a similar timescale to poorly fed ones. In sum, as long as there is some degree of nutrient limitation, we observe the emergence of structured communities. We conclude that resource-driven structuring is central to understanding both pattern and process in diverse microbial communities

    Slower recovery in space before collapse of connected populations

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    Slower recovery from perturbations near a tipping point and its indirect signatures in fluctuation patterns have been suggested to foreshadow catastrophes in a wide variety of systems. Recent studies of populations in the field and in the laboratory have used time-series data to confirm some of the theoretically predicted early warning indicators, such as an increase in recovery time or in the size and timescale of fluctuations. However, the predictive power of temporal warning signals is limited by the demand for long-term observations. Large-scale spatial data are more accessible, but the performance of warning signals in spatially extended systems needs to be examined empirically. Here we use spatially extended yeast populations, an experimental system with a fold bifurcation (tipping point), to evaluate early warning signals based on spatio-temporal fluctuations and to identify a novel spatial warning indicator. We found that two leading indicators based on fluctuations increased before collapse of connected populations; however, the magnitudes of the increases were smaller than those observed in isolated populations, possibly because local variation is reduced by dispersal. Furthermore, we propose a generic indicator based on deterministic spatial patterns, which we call ‘recovery length’. As the spatial counterpart of recovery time, recovery length is the distance necessary for connected populations to recover from spatial perturbations. In our experiments, recovery length increased substantially before population collapse, suggesting that the spatial scale of recovery can provide a superior warning signal before tipping points in spatially extended systems.United States. National Institutes of Health (NIH R00 GM085279-02)United States. National Institutes of Health (NIH DP2)Alfred P. Sloan FoundationNational Science Foundation (U.S.

    Magnetism, FeS colloids, and Origins of Life

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    A number of features of living systems: reversible interactions and weak bonds underlying motor-dynamics; gel-sol transitions; cellular connected fractal organization; asymmetry in interactions and organization; quantum coherent phenomena; to name some, can have a natural accounting via physicalphysical interactions, which we therefore seek to incorporate by expanding the horizons of `chemistry-only' approaches to the origins of life. It is suggested that the magnetic 'face' of the minerals from the inorganic world, recognized to have played a pivotal role in initiating Life, may throw light on some of these issues. A magnetic environment in the form of rocks in the Hadean Ocean could have enabled the accretion and therefore an ordered confinement of super-paramagnetic colloids within a structured phase. A moderate H-field can help magnetic nano-particles to not only overcome thermal fluctuations but also harness them. Such controlled dynamics brings in the possibility of accessing quantum effects, which together with frustrations in magnetic ordering and hysteresis (a natural mechanism for a primitive memory) could throw light on the birth of biological information which, as Abel argues, requires a combination of order and complexity. This scenario gains strength from observations of scale-free framboidal forms of the greigite mineral, with a magnetic basis of assembly. And greigite's metabolic potential plays a key role in the mound scenario of Russell and coworkers-an expansion of which is suggested for including magnetism.Comment: 42 pages, 5 figures, to be published in A.R. Memorial volume, Ed Krishnaswami Alladi, Springer 201

    Observation of Two New Excited Ξb0 States Decaying to Λb0 K-π+

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    Two narrow resonant states are observed in the Λb0K-π+ mass spectrum using a data sample of proton-proton collisions at a center-of-mass energy of 13 TeV, collected by the LHCb experiment and corresponding to an integrated luminosity of 6 fb-1. The minimal quark content of the Λb0K-π+ system indicates that these are excited Ξb0 baryons. The masses of the Ξb(6327)0 and Ξb(6333)0 states are m[Ξb(6327)0]=6327.28-0.21+0.23±0.12±0.24 and m[Ξb(6333)0]=6332.69-0.18+0.17±0.03±0.22 MeV, respectively, with a mass splitting of Δm=5.41-0.27+0.26±0.12 MeV, where the uncertainties are statistical, systematic, and due to the Λb0 mass measurement. The measured natural widths of these states are consistent with zero, with upper limits of Γ[Ξb(6327)0]<2.20(2.56) and Γ[Ξb(6333)0]<1.60(1.92) MeV at a 90% (95%) credibility level. The significance of the two-peak hypothesis is larger than nine (five) Gaussian standard deviations compared to the no-peak (one-peak) hypothesis. The masses, widths, and resonant structure of the new states are in good agreement with the expectations for a doublet of 1D Ξb0 resonances

    Angular Analysis of the B+ -> K*(+)mu(+) mu(-) Decay

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    We present an angular analysis of the B + → K * + ( → K 0 S π + ) ÎŒ + ÎŒ − decay using 9     fb − 1 of p p collision data collected with the LHCb experiment. For the first time, the full set of C P -averaged angular observables is measured in intervals of the dimuon invariant mass squared. Local deviations from standard model predictions are observed, similar to those in previous LHCb analyses of the isospin-partner B 0 → K * 0 ÎŒ + ÎŒ − decay. The global tension is dependent on which effective couplings are considered and on the choice of theory nuisance parameters

    Measurement of indirect CP asymmetries in D-0 -> K-K+ and D-0 -> pi(-)pi(+) decays using semileptonic B decays

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    Time-dependent CPCP asymmetries in the decay rates of the singly Cabibbo-suppressed decays D0→K−K+D^0\rightarrow K^-K^+ and D0→π−π+D^0\rightarrow \pi^-\pi^+ are measured in pppp collision data corresponding to an integrated luminosity of 3.0 fb−1^{-1} collected by the LHCb experiment. The D0D^0 mesons are produced in semileptonic bb-hadron decays, where the charge of the accompanying muon is used to determine the initial state as D0D^0 or Dˉ0\bar{D}^0. The asymmetries in effective lifetimes between D0D^0 and Dˉ0\bar{D}^0 decays, which are sensitive to indirect CPCP violation, are determined to be \begin{align*} A_{\Gamma}(K^-K^+) = (-0.134 \pm 0.077 \; {}^{+0.026}_{-0.034})\% \, A_{\Gamma}(\pi^-\pi^+) = (-0.092\pm 0.145 \; {}^{+0.025}_{-0.033})\% \, \end{align*} where the first uncertainties are statistical and the second systematic. This result is in agreement with previous measurements and with the hypothesis of no indirect CPCP violation in D0D^0 decays.Comment: 20 pages, 4 figure

    Study of eta-eta ' mixing from measurement of B-(s)(0) -> J/psi eta((')) decay rates

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    A study of B and Bs meson decays into J/ψ η and J/ψ ηâ€Č final states is performed using a data set of proton-proton collisions at centre-of-mass energies of 7 and 8 TeV, collected by the LCHb experiment and corresponding to 3.0 fb−1 of integrated luminosity. The decay B0 → J/ψ ηâ€Č is observed for the first time. The following ratios of branching fractions are measured: B(B0→J/ψηâ€Č)B(B0s→ J/ψηâ€Č)=(2.28±0.65 (stat)±0.10 (syst)±0.13 (fs/fd))×10−2,B(B0→ J/ψη)B(B0s→ J/ψη)=(1.85±0.61 (stat)±0.09 (syst)±0.11 (fs/fd))×10−2, where the third uncertainty is related to the present knowledge of fs/fd, the ratio between the probabilities for a b quark to form a Bs or a B0 meson. The branching fraction ratios are used to determine the parameters of η − ηâ€Č meson mixing. In addition, the first evidence for the decay Bs → ψ(2S)ηâ€Č is reported, and the relative branching fraction is measured, B(B0s→ ψ(2S)ηâ€Č)B(B0s→ J/ψηâ€Č)=(38.7±9.0 (stat)±1.3 (syst)±0.9(B))×10−2, where the third uncertainty is due to the limited knowledge of the branching fractions of J/ψ and ψ(2S) mesons

    Search for the lepton flavour violating decay τ − → ÎŒ − ÎŒ + ÎŒ −

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    A search for the lepton flavour violating decay τ−→Ό−Ό+Ό−\tau^-\to \mu^-\mu^+\mu^- is performed with the LHCb experiment. The data sample corresponds to an integrated luminosity of 1.0 fb−11.0\mathrm{\,fb}^{-1} of proton-proton collisions at a centre-of-mass energy of 7 TeV7\mathrm{\,Te\kern -0.1em V} and 2.0 fb−12.0\mathrm{\,fb}^{-1} at 8 TeV8\mathrm{\,Te\kern -0.1em V}. No evidence is found for a signal, and a limit is set at 90%90\% confidence level on the branching fraction, B(τ−→Ό−Ό+Ό−)<4.6×10−8\mathcal{B}(\tau^-\to \mu^-\mu^+\mu^-) < 4.6 \times 10^{-8}.Comment: 20 pages, 10 figures, published as JHEP 02 (2015) 12
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