How is the ocean filled?

The ocean surface rapidly exchanges heat, freshwater, and gases with the atmosphere, but once water sinks into the ocean interior, the inherited properties of seawater are closely conserved. Previous water-mass decompositions have described the oceanic interior as being filled by just a few different property combinations, or water masses. Here we apply a new inversion technique to climatological tracer distributions to find the pathways by which the ocean is filled from over 10,000 surface regions, based on the discretization of the ocean surface at 2° by 2° resolution. The volume of water originating from each surface location is quantified in a global framework, and can be summarized by the estimate that 15% of the surface area fills 85% of the ocean interior volume. Ranked from largest to smallest, the volume contributions scaled by surface area follow a power-law distribution with an exponent of −1.09 ± 0.03 that appears indicative of the advective-diffusive filling characteristics of the ocean circulation, as demonstrated using a simple model. This work quantifies the connection between the surface and interior ocean, allowing insight into ocean composition, atmosphere-ocean interaction, and the transient response of the ocean to a changing climate.Earth and Planetary Science

Head Wave Correlations in Ambient Noise

Ambient ocean noise is processed with a vertical line array to reveal coherent time-separated arrivals suggesting the presence of head wave multipath propagation. Head waves, which are critically propagating water waves created by seabed waves traveling parallel to the water-sediment interface, can propagate faster than water-only waves. Such eigenrays are much weaker than water-only eigenrays, and are often completely overshadowed by them. Surface-generated noise is different whereby it amplifies the coherence between head waves and critically propagating water-only waves, which is measured by cross-correlating critically steered beams. This phenomenon is demonstrated both experimentally and with a full wave simulation

Interaction specificity of Arabidopsis 14-3-3 proteins with phototropin receptor kinases

Phototropin receptor kinases play an important roles in optimising plant growth in response to blue light. Much is known regarding their photochemical reactivity, yet little progress has been made to identify downstream signalling components. Here, we isolated several interacting proteins for Arabidopsis phototropin 1 (phot1) by yeast two-hybrid screening. These include members of the NPH3/RPT2 (NRL) protein family, proteins associated with vesicle trafficking, and the 14-3-3 lambda (?) isoform from Arabidopsis . 14-3-3? and phot1 were found to colocalise and interact in vivo. Moreover, 14-3-3 binding to phot1 was limited to non-epsilon 14-3-3 isoforms and was dependent on key sites of receptor autophosphorylation. No 14-3-3 binding was detected for Arabidopsis phot2, suggesting that 14-3-3 proteins represent specific mode of phot1 signalling

Identification of the protein kinases Pyk3 and Phg2 as regulators of the STATc-mediated response to hyperosmolarity

Cellular adaptation to changes in environmental osmolarity is crucial for cell survival. In Dictyostelium, STATc is a key regulator of the transcriptional response to hyperosmotic stress. Its phosphorylation and consequent activation is controlled by two signaling branches, one cGMP- and the other Ca(2+)-dependent, of which many signaling components have yet to be identified. The STATc stress signalling pathway feeds back on itself by upregulating the expression of STATc and STATc-regulated genes. Based on microarray studies we chose two tyrosine-kinase like proteins, Pyk3 and Phg2, as possible modulators of STATc phosphorylation and generated single and double knock-out mutants to them. Transcriptional regulation of STATc and STATc dependent genes was disturbed in pyk3(-), phg2(-), and pyk3(-)/phg2(-) cells. The absence of Pyk3 and/or Phg2 resulted in diminished or completely abolished increased transcription of STATc dependent genes in response to sorbitol, 8-Br-cGMP and the Ca(2+) liberator BHQ. Also, phospho-STATc levels were significantly reduced in pyk3(-) and phg2(-) cells and even further decreased in pyk3(-)/phg2(-) cells. The reduced phosphorylation was mirrored by a significant delay in nuclear translocation of GFP-STATc. The protein tyrosine phosphatase 3 (PTP3), which dephosphorylates and inhibits STATc, is inhibited by stress-induced phosphorylation on S448 and S747. Use of phosphoserine specific antibodies showed that Phg2 but not Pyk3 is involved in the phosphorylation of PTP3 on S747. In pull-down assays Phg2 and PTP3 interact directly, suggesting that Phg2 phosphorylates PTP3 on S747 in vivo. Phosphorylation of S448 was unchanged in phg2(-) cells. We show that Phg2 and an, as yet unknown, S448 protein kinase are responsible for PTP3 phosphorylation and hence its inhibition, and that Pyk3 is involved in the regulation of STATc by either directly or indirectly activating it. Our results add further complexities to the regulation of STATc, which presumably ensure its optimal activation in response to different environmental cues

Male circumcision for HIV prevention: current evidence and implementation in sub-Saharan Africa

Heterosexual exposure accounts for most HIV transmission in sub-Saharan Africa, and this mode, as a proportion of new infections, is escalating globally. The scientific evidence accumulated over more than 20 years shows that among the strategies advocated during this period for HIV prevention, male circumcision is one of, if not, the most efficacious epidemiologically, as well as cost-wise. Despite this, and recommendation of the procedure by global policy makers, national implementation has been slow. Additionally, some are not convinced of the protective effect of male circumcision and there are also reports, unsupported by evidence, that non-sex-related drivers play a major role in HIV transmission in sub-Saharan Africa. Here, we provide a critical evaluation of the state of the current evidence for male circumcision in reducing HIV infection in light of established transmission drivers, provide an update on programmes now in place in this region, and explain why policies based on established scientific evidence should be prioritized. We conclude that the evidence supports the need to accelerate the implementation of medical male circumcision programmes for HIV prevention in generalized heterosexual epidemics, as well as in countering the growing heterosexual transmission in countries where HIV prevalence is presently low

Recovering distance information in spectral domain interferometry

This work evaluates the performance of the Complex Master Slave (CMS) method, that processes the spectra at the interferometer output of a spectral domain interferometry device without involving Fourier transforms (FT) after data acquisition. Reliability and performance of CMS are compared side by side with the conventional method based on FT, phase calibration with dispersion compensation (PCDC). We demonstrate that both methods provide similar results in terms of resolution and sensitivity drop-off. The mathematical operations required to produce CMS results are highly parallelizable, allowing real-time, simultaneous delivery of data from several points of different optical path differences in the interferometer, not possible via PCDC

Fluid and gas models in FLRW and almost FLRW universes

Includes bibliographical references.Recently the universe has been modeled in the covariant sense, in terms of fluid models and perturbations thereof, leading to Gauge Invariant Covariant (GIC) perturbations of these fluid models. It is well known that kinetic theory provides a physically sound and consistent description of the matter and radiation in the universe, so a perturbative theory of gas models using kinetic theory would be most helpful. This has been done to a large degree in the Gauge Invariant (GI) Bardeen approach to perturbation theory by studies of gases based on the relativistic Boltzmann equation. These treatments, however, were not fully covariant. The GI Bardeen approach is dependent on a co-ordinate choice, while in the full GIC perturbation theory full covariance is maintained along with gauge invariance by describing the theory in a particular set of perturbation variables that differ from the Bardeen choice but can be related to the Bardeen variables. The covariant formulation of the relativistic Boltzmann equation in terms of variables that are of use in the GIC theory for gases has been well described. In this thesis, I provide both a good introduction to the full GIC perturbation theory of a photon gas and matter fluid system in the linear theory as well as a solid grounding with respect to the exact FLRW fluid model upon which most of the original ideas and concepts of modern cosmology are based. The introduction to the exact FLRW model is done in the sense of the dynamical systems approach to cosmology which provides the easiest access to understanding the evolution of single and multi-fluid FLRW models

Environmental Information Content of Ocean Ambient Noise

In recent years, methods have been developed to estimate a variety of environmental parameters based on measurements of the ocean ambient noise. For example, noise has been used to estimate water depth using the passive fathometer technique and bottom loss estimated and used to invert for seabed parameters. There is also information in the noise about the water column sound speed, volume attenuation, and the sea-state. The Fisher information can be used to quantify the basic information available in the noise measurements and its inverse, the Cramér–Rao lower bound (CRLB), provides the lower limit on the variance of an unbiased estimator of a particular parameter. The CRLB can be used to study the feasibility of various measurement configurations and parameter sensitivities. In this paper, the CRLB is developed for ocean ambient noise and the environmental information contained in the measurements is determined. The CRLBs provide an estimate of the underlying information in the data, however, it is independent of the estimation methodology. This is useful to determine if a given estimation method is reaching the lower bound. Results illustrating the bounds as well as sensitivities and performance of estimators are demonstrated using both simulations and data

Aspect-Dependent Radiated Noise Analysis of an Underway Autonomous Underwater Vehicle

This paper presents an analysis of the acoustic emissions emitted by an underway REMUS-100 autonomous underwater vehicle(AUV) that were obtained near Honolulu Harbor, HI using a fixed, bottom-mounted horizontal line array (HLA). Spectral analysis,beamforming, and cross-correlation facilitate identification of independent sources of noise originating from the AUV. Fusion of navigational records from the AUV with acoustic data from the HLA allows for an aspect-dependent presentation of calculated source levels of the strongest propulsion tone