1,396 research outputs found
Computer aided characterization of early cancer in Barrett's esophagus on i-scan magnification imaging - Multicenter international study
BACKGROUND AND AIMS: We aimed to develop a computer aided characterization system that can support the diagnosis of dysplasia in Barrett's esophagus (BE) on magnification endoscopy. METHODS: Videos were collected in high-definition magnification white light and virtual chromoendoscopy with i-scan (Pentax Hoya, Japan) imaging in patients with dysplastic/ non-dysplastic BE (NDBE) from 4 centres. We trained a neural network with a Resnet101 architecture to classify frames as dysplastic or non-dysplastic. The network was tested on three different scenarios: high-quality still images, all available video frames and a selected sequence within each video. RESULTS: 57 different patients each with videos of magnification areas of BE (34 dysplasia, 23 NDBE) were included. Performance was evaluated using a leave-one-patient-out cross-validation methodology. 60,174 (39,347 dysplasia, 20,827 NDBE) magnification video frames were used to train the network. The testing set included 49,726 iscan-3/optical enhancement magnification frames. On 350 high-quality still images the network achieved a sensitivity of 94%, specificity of 86% and Area under the ROC (AUROC) of 96%. On all 49,726 available video frames the network achieved a sensitivity of 92%, specificity of 82% and AUROC of 95%. On a selected sequence of frames per case (total of 11,471 frames) we used an exponentially weighted moving average of classifications on consecutive frames to characterize dysplasia. The network achieved a sensitivity of 92%, specificity of 84% and AUROC of 96% The mean assessment speed per frame was 0.0135 seconds (SD, + 0.006) CONCLUSION: Our network can characterize BE dysplasia with high accuracy and speed on high-quality magnification images and sequence of video frames moving it towards real time automated diagnosis
A catalogue of young runaway Hipparcos stars within 3kpc from the Sun
Traditionally runaway stars are O and B type stars with large peculiar
velocities.We want to extend this definition to young stars (up to ~50 Myr) of
any spectral type and identify those present in the Hipparcos catalogue
applying different selection criteria such as peculiar space velocities or
peculiar one-dimensional velocities. Runaway stars are important to study the
evolution of multiple star systems or star clusters as well as to identify
origins of neutron stars. We compile distances, proper motions, spectral types,
luminosity classes, V magnitudes and B-V colours and utilise evolutionary
models from different authors to obtain star ages and study a sample of 7663
young Hipparcos stars within 3 kpc from the Sun. Radial velocities are obtained
from the literature. We investigate the distributions of the peculiar spatial
velocity, the peculiar radial velocity as well as the peculiar tangential
velocity and its one-dimensional components and obtain runaway star
probabilities for each star in the sample. In addition, we look for stars that
are situated outside any OB association or OB cluster and the Galactic plane as
well as stars of which the velocity vector points away from the median velocity
vector of neighbouring stars or the surrounding local OB association/ cluster
although the absolute velocity might be small. We find a total of 2547 runaway
star candidates (with a contamination of normal Population I stars of 20 per
cent at most). Thus, after subtraction of those 20 per cent, the runaway
frequency among young stars is about 27 per cent. We compile a catalogue of
runaway stars which will be available via VizieR.Comment: 12 pages, 8 figures, 7 tables, accepted for publication in MNRAS old
version replaced due to change of the title after journal proof-readin
A new artificial intelligence system successfully detects and localises early neoplasia in Barrett's esophagus by using convolutional neural networks
BACKGROUND AND AIMS:
Seattle protocol biopsies for Barrett's Esophagus (BE) surveillance are labour intensive with low compliance. Dysplasia detection rates vary, leading to missed lesions. This can potentially be offset with computer aided detection. We have developed convolutional neural networks (CNNs) to identify areas of dysplasia and where to target biopsy.
METHODS:
119 Videos were collected in high-definition white light and optical chromoendoscopy with i-scan (Pentax Hoya, Japan) imaging in patients with dysplastic and non-dysplastic BE (NDBE). We trained an indirectly supervised CNN to classify images as dysplastic/non-dysplastic using whole video annotations to minimise selection bias and maximise accuracy. The CNN was trained using 148,936 video frames (31 dysplastic patients, 31 NDBE, two normal esophagus), validated on 25,161 images from 11 patient videos and tested on 264 iscan-1 images from 28 dysplastic and 16 NDBE patients which included expert delineations. To localise targeted biopsies/delineations, a second directly supervised CNN was generated based on expert delineations of 94 dysplastic images from 30 patients. This was tested on 86 i-scan one images from 28 dysplastic patients.
FINDINGS:
The indirectly supervised CNN achieved a per image sensitivity in the test set of 91%, specificity 79%, area under receiver operator curve of 93% to detect dysplasia. Per-lesion sensitivity was 100%. Mean assessment speed was 48 frames per second (fps). 97% of targeted biopsy predictions matched expert and histological assessment at 56 fps. The artificial intelligence system performed better than six endoscopists.
INTERPRETATION:
Our CNNs classify and localise dysplastic Barrett's Esophagus potentially supporting endoscopists during surveillance
Measurement of Z/gamma*+jet+X angular distributions in ppbar collisions at sqrt{s}=1.96 TeV
We present the first measurements at a hadron collider of differential cross
sections for Z+jet+X production in delta phi(Z, jet), |delta y(Z, jet)| and
|y_boost(Z, jet)|. Vector boson production in association with jets is an
excellent probe of QCD and constitutes the main background to many small cross
section processes, such as associated Higgs production. These measurements are
crucial tests of the predictions of perturbative QCD and current event
generators, which have varied success in describing the data. Using these
measurements as inputs in tuning event generators will increase the
experimental sensitivity to rare signals.Comment: Published in Physics Letters B 682 (2010), pp. 370-380. 15 pages, 6
figure
Observation of ZZ production in ppbar collisions at sqrt(s) = 1.96 TeV
We present an observation for ZZ -> l+l-l'+l'- (l, l' = e or mu) production
in ppbar collisions at a center-of-mass energy of sqrt(s) = 1.96 TeV. Using 1.7
fb-1 of data collected by the D0 experiment at the Fermilab Tevatron Collider,
we observe three candidate events with an expected background of 0.14 +0.03
-0.02 events. The significance of this observation is 5.3 standard deviations.
The combination of D0 results in this channel, as well as in ZZ -> l+l-nunubar,
yields a significance of 5.7 standard deviations and a combined cross section
of sigma(ZZ) = 1.60 +/- 0.63 (stat.) +0.16 -0.17 (syst.) pb.Comment: 7 pages, 1 figure, 2 tables Modified slightly following review
proces
Search for single top quarks in the tau+jets channel using 4.8 fb of collision data
We present the first direct search for single top quark production using tau
leptons. The search is based on 4.8 fb of integrated luminosity
collected in collisions at =1.96 TeV with the D0 detector
at the Fermilab Tevatron Collider. We select events with a final state
including an isolated tau lepton, missing transverse energy, two or three jets,
one or two of them tagged. We use a multivariate technique to discriminate
signal from background. The number of events observed in data in this final
state is consistent with the signal plus background expectation. We set in the
tau+jets channel an upper limit on the single top quark cross section of
\TauLimObs pb at the 95% C.L. This measurement allows a gain of 4% in expected
sensitivity for the observation of single top production when combining it with
electron+jets and muon+jets channels already published by the D0 collaboration
with 2.3 fb of data. We measure a combined cross section of
\SuperCombineXSall pb, which is the most precise measurement to date.Comment: 12 pages, 5 figure
Measurement of the dijet invariant mass cross section in proton anti-proton collisions at sqrt{s} = 1.96 TeV
The inclusive dijet production double differential cross section as a
function of the dijet invariant mass and of the largest absolute rapidity of
the two jets with the largest transverse momentum in an event is measured in
proton anti-proton collisions at sqrt{s} = 1.96 TeV using 0.7 fb^{-1}
integrated luminosity collected with the D0 detector at the Fermilab Tevatron
Collider. The measurement is performed in six rapidity regions up to a maximum
rapidity of 2.4. Next-to-leading order perturbative QCD predictions are found
to be in agreement with the data.Comment: Published in Phys. Lett. B, 693, (2010), 531-538, 8 pages, 2 figures,
6 table
Search for the standard model Higgs boson in tau final states
We present a search for the standard model Higgs boson using hadronically
decaying tau leptons, in 1 inverse femtobarn of data collected with the D0
detector at the Fermilab Tevatron ppbar collider. We select two final states:
tau plus missing transverse energy and b jets, and tau+ tau- plus jets. These
final states are sensitive to a combination of associated W/Z boson plus Higgs
boson, vector boson fusion and gluon-gluon fusion production processes. The
observed ratio of the combined limit on the Higgs production cross section at
the 95% C.L. to the standard model expectation is 29 for a Higgs boson mass of
115 GeV.Comment: publication versio
Measurement of the B0_s semileptonic branching ratio to an orbitally excited D_s** state, Br(B0_s -> Ds1(2536) mu nu)
In a data sample of approximately 1.3 fb-1 collected with the D0 detector
between 2002 and 2006, the orbitally excited charm state D_s1(2536) has been
observed with a measured mass of 2535.7 +/- 0.6 (stat) +/- 0.5 (syst) MeV via
the decay mode B0_s -> D_s1(2536) mu nu X. A first measurement is made of the
branching ratio product Br(b(bar) -> D_s1(2536) mu nu X).Br(D_s1(2536)->D*
K0_S). Assuming that D_s1(2536) production in semileptonic decay is entirely
from B0_s, an extraction of the semileptonic branching ratio Br(B0_s ->
D_s1(2536) mu nu X) is made.Comment: 7 pages, 2 figures, LaTeX, version with minor changes as accepted by
Phys. Rev. Let
Simultaneous measurement of the ratio B(t->Wb)/B(t->Wq) and the top quark pair production cross section with the D0 detector at sqrt(s)=1.96 TeV
We present the first simultaneous measurement of the ratio of branching
fractions, R=B(t->Wb)/B(t->Wq), with q being a d, s, or b quark, and the top
quark pair production cross section sigma_ttbar in the lepton plus jets channel
using 0.9 fb-1 of ppbar collision data at sqrt(s)=1.96 TeV collected with the
D0 detector. We extract R and sigma_ttbar by analyzing samples of events with
0, 1 and >= 2 identified b jets. We measure R = 0.97 +0.09-0.08 (stat+syst) and
sigma_ttbar = 8.18 +0.90-0.84 (stat+syst)} +/-0.50 (lumi) pb, in agreement with
the standard model prediction.Comment: submitted to Phys.Rev.Letter
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