Spectropolarimetric measurements of hidden broad lines in nearby megamaser galaxies: a lack of clear evidence for a correlation between black hole masses and virial products

High-accuracy black hole (BH) masses require excellent spatial resolution that is only achievable for galaxies within ~100 Mpc using present-day technology. At larger distances, BH masses are often estimated with single-epoch scaling relations for active galactic nuclei. This method requires only luminosity and the velocity dispersion of the broad line region (BLR) to calculate a virial product, and an additional virial factor, $f$, to determine BH mass. The accuracy of these single-epoch masses, however, is unknown, and there are few empirical constraints on the variance of $f$ between objects. We attempt to calibrate single-epoch BH masses using spectropolarimetric measurements of nine megamaser galaxies from which we measure the velocity distribution of the BLR. We do not find strong evidence for a correlation between the virial products used for single-epoch masses and dynamical mass, both for the megamaser sample alone and when combined with dynamical masses from reverberation mapping modeling. Furthermore, we find evidence that the virial parameter $f$ varies between objects, but we do not find strong evidence for a correlation with other observable parameters such as luminosity or broad line width. Although we cannot definitively rule out the existence of any correlation between dynamical mass and virial product, we find tension between allowed $f$ values for masers and those widely used in the literature. We conclude that the single-epoch method requires further investigation if it is to be used successfully to infer BH masses.Comment: 27 pages, 16 figures, resubmitted to ApJ after incorporating reviewer's comments. Corrected Figure 8, main results do not chang

Q2Q_2-free families in the Boolean lattice

For a family $\mathcal{F}$ of subsets of [n]=\{1, 2, ..., n} ordered by inclusion, and a partially ordered set P, we say that $\mathcal{F}$ is P-free if it does not contain a subposet isomorphic to P. Let $ex(n, P)$ be the largest size of a P-free family of subsets of [n]. Let $Q_2$ be the poset with distinct elements a, b, c, d, a<b, c<d; i.e., the 2-dimensional Boolean lattice. We show that $2N -o(N) \leq ex(n, Q_2)\leq 2.283261N +o(N),$ where $N = \binom{n}{\lfloor n/2 \rfloor}$. We also prove that the largest $Q_2$-free family of subsets of [n] having at most three different sizes has at most 2.20711N members.Comment: 18 pages, 2 figure

Analytical Validation and Capabilities of the Epic CTC Platform: Enrichment-Free Circulating Tumour Cell Detection and Characterization

The Epic Platform was developed for the unbiased detection and molecular characterization of circulating tumour cells (CTCs). Here, we report assay performance data, including accuracy, linearity, specificity and intra/inter-assay precision of CTC enumeration in healthy donor (HD) blood samples spiked with varying concentrations of cancer cell line controls (CLCs). Additionally, we demonstrate clinical feasibility for CTC detection in a small cohort of metastatic castrate-resistant prostate cancer (mCRPC) patients. The Epic Platform demonstrated accuracy, linearity and sensitivity for the enumeration of all CLC concentrations tested. Furthermore, we established the precision between multiple operators and slide staining batches and assay specificity showing zero CTCs detected in 18 healthy donor samples. In a clinical feasibility study, at least one traditional CTC/mL (CK+, CD45-, and intact nuclei) was detected in 89 % of 44 mCRPC samples, whereas 100 % of samples had CTCs enumerated if additional CTC subpopulations (CK-/CD45- and CK+ apoptotic CTCs) were included in the analysis. In addition to presenting Epic Platform’s performance with respect to CTC enumeration, we provide examples of its integrated downstream capabilities, including protein biomarker expression and downstream genomic analyses at single cell resolution

Genetic diversity of Brazilian isolates of feline immunodeficiency virus

We isolated Feline immunodeficiency virus (FIV) from three adult domestic cats, originating from two open shelters in Brazil. Viruses were isolated from PBMC following co-cultivation with the feline T-lymphoblastoid cell line MYA-1. All amplified env gene products were cloned directly into pGL8MYA. The nucleic acid sequences of seven clones were determined and then compared with those of previously described isolates. The sequences of all of the Brazilian virus clones were distinct and phylogenetic analysis revealed that all belong to subtype B. Three variants isolated from one cat and two variants were isolated from each of the two other cats, indicating that intrahost diversity has the potential to pose problems for the treatment and diagnosis of FIV infection

Molecular Adaptation to Folivory and the Conservation Implications for Madagascar’s Lemurs

The lemurs of Madagascar include numerous species characterized by folivory across several families. Many extant lemuriform folivores exist in sympatry in Madagascar’s remaining forests. These species avoid feeding competition by adopting different dietary strategies within folivory, reflected in behavioral, morphological, and microbiota diversity across species. These conditions make lemurs an ideal study system for understanding adaptation to leaf-eating. Most folivorous lemurs are also highly endangered. The significance of folivory for conservation outlook is complex. Though generalist folivores may be relatively well equipped to survive habitat disturbance, specialist folivores occupying narrow dietary niches may be less resilient. Characterizing the genetic bases of adaptation to folivory across species and lineages can provide insights into their differential physiology and potential to resist habitat change. We recently reported accelerated genetic change in RNASE1, a gene encoding an enzyme (RNase 1) involved in molecular adaptation in mammalian folivores, including various monkeys and sifakas (genus Propithecus; family Indriidae). Here, we sought to assess whether other lemurs, including phylogenetically and ecologically diverse folivores, might show parallel adaptive change in RNASE1 that could underlie a capacity for efficient folivory. We characterized RNASE1in 21 lemur species representing all five families and members of the three extant folivorous lineages: (1) bamboo lemurs (family Lemuridae), (2) sportive lemurs (family Lepilemuridae), and (3) indriids (family Indriidae). We found pervasive sequence change in RNASE1 across all indriids, a dN/dS value \u3e 3 in this clade, and evidence for shared change in isoelectric point, indicating altered enzymatic function. Sportive and bamboo lemurs, in contrast, showed more modest sequence change. The greater change in indriids may reflect a shared strategy emphasizing complex gut morphology and microbiota to facilitate folivory. This case study illustrates how genetic analysis may reveal differences in functional traits that could influence species’ ecology and, in turn, their resilience to habitat change. Moreover, our results support the body of work demonstrating that not all primate folivores are built the same and reiterate the need to avoid generalizations about dietary guild in considering conservation outlook, particularly in lemurs where such diversity in folivory has probably led to extensive specialization via niche partitioning

Spooked

There’s always something a bit scary about a ghost story. Somehow, though, when you read a collection of them you’re expecting to meet a spook or two. It takes a little more effort to frighten the reader. We hope we’ve managed to do just that with this bunch of tales and our striking cover. We hope as well you’ll find the stories as different from each other as they are from the normal ghost story. You’ll come across some old friends amongst the authors in this volume. Bridge House is beginning to es-tablish a brand and we have several writers now who have the measure of what we’re looking for. You’ll also meet some new names and writing styles. We’re sure both will please. And now to the ghosts…. They too have a life of their own … precisely drawn by our authors. It’s that time of year isn’t it? When the nights are getting longer, the days are getting shorter, when strange shadows lurk and you begin to hear noises you don’t understand. We have traditional ghosts, more subtle ghosts, naughty ghosts, nice ghost, nasty ghost and in one or two of our stories it’s a little difficult to work out who is haunting whom. Stoke up the fire, sit back, enjoy and prepare to be: Spooked

Combined search for the quarks of a sequential fourth generation

Results are presented from a search for a fourth generation of quarks produced singly or in pairs in a data set corresponding to an integrated luminosity of 5 inverse femtobarns recorded by the CMS experiment at the LHC in 2011. A novel strategy has been developed for a combined search for quarks of the up and down type in decay channels with at least one isolated muon or electron. Limits on the mass of the fourth-generation quarks and the relevant Cabibbo-Kobayashi-Maskawa matrix elements are derived in the context of a simple extension of the standard model with a sequential fourth generation of fermions. The existence of mass-degenerate fourth-generation quarks with masses below 685 GeV is excluded at 95% confidence level for minimal off-diagonal mixing between the third- and the fourth-generation quarks. With a mass difference of 25 GeV between the quark masses, the obtained limit on the masses of the fourth-generation quarks shifts by about +/- 20 GeV. These results significantly reduce the allowed parameter space for a fourth generation of fermions.Comment: Replaced with published version. Added journal reference and DO

Search for anomalous t t-bar production in the highly-boosted all-hadronic final state

A search is presented for a massive particle, generically referred to as a Z', decaying into a t t-bar pair. The search focuses on Z' resonances that are sufficiently massive to produce highly Lorentz-boosted top quarks, which yield collimated decay products that are partially or fully merged into single jets. The analysis uses new methods to analyze jet substructure, providing suppression of the non-top multijet backgrounds. The analysis is based on a data sample of proton-proton collisions at a center-of-mass energy of 7 TeV, corresponding to an integrated luminosity of 5 inverse femtobarns. Upper limits in the range of 1 pb are set on the product of the production cross section and branching fraction for a topcolor Z' modeled for several widths, as well as for a Randall--Sundrum Kaluza--Klein gluon. In addition, the results constrain any enhancement in t t-bar production beyond expectations of the standard model for t t-bar invariant masses larger than 1 TeV.Comment: Submitted to the Journal of High Energy Physics; this version includes a minor typo correction that will be submitted as an erratu

Measurement of the t t-bar production cross section in the dilepton channel in pp collisions at sqrt(s) = 7 TeV

The t t-bar production cross section (sigma[t t-bar]) is measured in proton-proton collisions at sqrt(s) = 7 TeV in data collected by the CMS experiment, corresponding to an integrated luminosity of 2.3 inverse femtobarns. The measurement is performed in events with two leptons (electrons or muons) in the final state, at least two jets identified as jets originating from b quarks, and the presence of an imbalance in transverse momentum. The measured value of sigma[t t-bar] for a top-quark mass of 172.5 GeV is 161.9 +/- 2.5 (stat.) +5.1/-5.0 (syst.) +/- 3.6(lumi.) pb, consistent with the prediction of the standard model.Comment: Replaced with published version. Included journal reference and DO