Structural basis of control of inward rectifier Kir2 channel gating by bulk anionic phospholipids

Inward rectifier potassium (Kir) channel activity is controlled by plasma membrane lipids. Phosphatidylinositol-4,5-bisphosphate (PIP(2)) binding to a primary site is required for opening of classic inward rectifier Kir2.1 and Kir2.2 channels, but interaction of bulk anionic phospholipid (PL(−)) with a distinct second site is required for high PIP(2) sensitivity. Here we show that introduction of a lipid-partitioning tryptophan at the second site (K62W) generates high PIP(2) sensitivity, even in the absence of PL(−). Furthermore, high-resolution x-ray crystal structures of Kir2.2[K62W], with or without added PIP(2) (2.8- and 2.0-Å resolution, respectively), reveal tight tethering of the C-terminal domain (CTD) to the transmembrane domain (TMD) in each condition. Our results suggest a refined model for phospholipid gating in which PL(−) binding at the second site pulls the CTD toward the membrane, inducing the formation of the high-affinity primary PIP(2) site and explaining the positive allostery between PL(−) binding and PIP(2) sensitivity

The Geometry of Integrable and Superintegrable Systems

The group of automorphisms of the geometry of an integrable system is considered. The geometrical structure used to obtain it is provided by a normal form representation of integrable systems that do not depend on any additional geometrical structure like symplectic, Poisson, etc. Such geometrical structure provides a generalized toroidal bundle on the carrier space of the system. Non--canonical diffeomorphisms of such structure generate alternative Hamiltonian structures for complete integrable Hamiltonian systems. The energy-period theorem provides the first non--trivial obstruction for the equivalence of integrable systems

From Classical Trajectories to Quantum Commutation Relations

In describing a dynamical system, the greatest part of the work for a theoretician is to translate experimental data into differential equations. It is desirable for such differential equations to admit a Lagrangian and/or an Hamiltonian description because of the Noether theorem and because they are the starting point for the quantization. As a matter of fact many ambiguities arise in each step of such a reconstruction which must be solved by the ingenuity of the theoretician. In the present work we describe geometric structures emerging in Lagrangian, Hamiltonian and Quantum description of a dynamical system underlining how many of them are not really fixed only by the trajectories observed by the experimentalist.Comment: 25 pages. Comments are welcome

Stopping of Charged Particles in a Magnetized Classical Plasma

The analytical and numerical investigations of the energy loss rate of the test particle in a magnetized electron plasma are developed on the basis of the Vlasov-Poisson equations, and the main results are presented. The Larmor rotation of a test particle in a magnetic field is taken into account. The analysis is based on the assumption that the energy variation of the test particle is much less than its kinetic energy. The obtained general expression for stopping power is analyzed for three cases: (i) the particle moves through a collisionless plasma in a strong homogeneous magnetic field; (ii) the fast particle moves through a magnetized collisionless plasma along the magnetic field; and (iii) the particle moves through a magnetized collisional plasma across a magnetic field. Calculations are carried out for the arbitrary test particle velocities in the first case, and for fast particles in the second and third cases. It is shown that the rate at which a fast test particle loses energy while moving across a magnetic field may be much higher than the loss in the case of motion through plasma without magnetic field.Comment: 14 pages, 3 figures, LaTe

A complete sample of bright Swift Long Gamma-Ray Bursts: Sample presentation, Luminosity Function and evolution

We present a carefully selected sub-sample of Swift Long Gamma-ray Bursts (GRBs), that is complete in redshift. The sample is constructed by considering only bursts with favorable observing conditions for ground-based follow-up searches, that are bright in the 15-150 keV Swift/BAT band, i.e. with 1-s peak photon fluxes in excess to 2.6 ph s^-1 cm^-2. The sample is composed by 58 bursts, 52 of them with redshift for a completeness level of 90%, while another two have a redshift constraint, reaching a completeness level of 95%. For only three bursts we have no constraint on the redshift. The high level of redshift completeness allows us for the first time to constrain the GRB luminosity function and its evolution with cosmic times in a unbiased way. We find that strong evolution in luminosity (d_l=2.3\pm 0.6) or in density (d_d=1.7\pm 0.5) is required in order to account for the observations. The derived redshift distribution in the two scenarios are consistent with each other, in spite of their different intrinsic redshift distribution. This calls for other indicators to distinguish among different evolution models. Complete samples are at the base of any population studies. In future works we will use this unique sample of Swift bright GRBs to study the properties of the population of long GRBs.Comment: 7 pages, 3 figures, 2 tables; ApJ in pres

Long-range attraction between particles in dusty plasma and partial surface tension of dusty phase boundary

Effective potential of a charged dusty particle moving in homogeneous plasma has a negative part that provides attraction between similarly charged dusty particles. A depth of this potential well is great enough to ensure both stability of crystal structure of dusty plasma and sizable value of surface tension of a boundary surface of dusty region. The latter depends on the orientation of the surface relative to the counter-ion flow, namely, it is maximal and positive for the surface normal to the flow and minimal and negative for the surface along the flow. For the most cases of dusty plasma in a gas discharge, a value of the first of them is more than sufficient to ensure stability of lenticular dusty phase void oriented across the counter-ion flow.Comment: LATEX, REVTEX4, 7 pages, 6 figure

The X-ray absorbing column density of a complete sample of bright Swift Gamma-Ray Bursts

A complete sample of bright Swift Gamma-ray Bursts (GRBs) has been recently selected by Salvaterra et al. (2011). The sample has a high level of completeness in redshift (91%). We derive here the intrinsic absorbing X-ray column densities of these GRBs making use of the Swift X-ray Telescope data. This distribution has a mean value of log(NH/cm-2)=21.7+-0.5. This value is consistent with the distribution of the column densities derived from the total sample of GRBs with redshift. We find a mild increase of the intrinsic column density with redshift. This can be interpreted as due to the contribution of intervening systems along the line of sight. Making use of the spectral index connecting optical and X-ray fluxes at 11 hr (beta_OX), we investigate the relation of the intrinsic column density and the GRB `darkness'. We find that there is a very tight correlation between dark GRBs and high X-ray column densities. This clearly indicates that the dark GRBs are formed in a metal-rich environment where dust must be present.Comment: MNRAS, 6 pages, 3 figures, 1 tabl

SN 2013dx associated with GRB 130702A: a detailed photometric and spectroscopic monitoring and a study of the environment

Long duration gamma-ray bursts (GRBs) and broad-line, type Ic supernovae (SNe) are strongly connected. We aim at characterizing SN 2013dx, associated with GRB\,130702A, through sensitive and extensive ground-based observational campaigns in the optical-IR band. We monitored the field of the Swift GRB 130702A (redshift z = 0.145) using the 8.2-m VLT, the 3.6-m TNG and the 0.6-m REM telescopes during the time interval between 4 and 40 days after the burst. Photometric and spectroscopic observations revealed the presence of the associated Type Ic SN 2013dx. Our multi-band photometry allowed the construction of a bolometric light curve.} The bolometric light curve of SN 2013dx resembles that of 2003dh (associated with GRB 030329), but is ~10% faster and ~25% dimmer. From this we infer a synthesized 56Ni mass of ~0.2 solar masses. The multi-epoch optical spectroscopy shows that the SN 2013dx behavior is best matched by SN 1998bw, among the other well-known low-redshift SNe associated with GRBs and XRFs, and by SN 2010ah, an energetic Type Ic SN not associated with any GRB. The photospheric velocity of the ejected material declines from ~2.7X10^4 km/s at 8 rest frame days from the explosion, to ~3.5X10^3 km/s at 40 days. These values are extremely close to those of SN1998bw and 2010ah. We deduce for SN 2013dx a kinetic energy of ~35X10^51 erg, and an ejected mass of ~7 solar masses. This suggests that the progenitor of SN2013dx had a mass of ~25 solar masses, i.e., 15-20% less massive than that of SN 1998bw. Finally, we performed a study of the SN 2013dx environment, through spectroscopy of the closeby galaxies. 9 out of the 14 inspected galaxies lie within 0.03 in redshift from z=0.145, indicating that the host of GRB 130702A/SN 2013dx belongs to a group of galaxies, an unprecedented finding for a GRB-associated SN and, to our knowledge, for long GRBs in general

Superluminal motion of a relativistic jet in the neutron star merger GW170817

The binary neutron star merger GW170817 was accompanied by radiation across the electromagnetic spectrum and localized to the galaxy NGC 4993 at a distance of 41+/-3 Mpc. The radio and X-ray afterglows of GW170817 exhibited delayed onset, a gradual rise in the emission with time as t^0.8, a peak at about 150 days post-merger, followed by a relatively rapid decline. To date, various models have been proposed to explain the afterglow emission, including a choked-jet cocoon and a successful-jet cocoon (a.k.a. structured jet). However, the observational data have remained inconclusive as to whether GW170817 launched a successful relativistic jet. Here we show, through Very Long Baseline Interferometry, that the compact radio source associated with GW170817 exhibits superluminal motion between two epochs at 75 and 230 days post-merger. This measurement breaks the degeneracy between the models and indicates that, while the early-time radio emission was powered by a wider-angle outflow (cocoon), the late-time emission was most likely dominated by an energetic and narrowly-collimated jet, with an opening angle of <5 degrees, and observed from a viewing angle of about 20 degrees. The imaging of a collimated relativistic outflow emerging from GW170817 adds substantial weight to the growing evidence linking binary neutron star mergers and short gamma-ray bursts.Comment: 42 pages, 4 figures (main text), 2 figures (supplementary text), 2 tables. Referee and editor comments incorporate