94 research outputs found
Dynamical trapping and chaotic scattering of the harmonically driven barrier
A detailed analysis of the classical nonlinear dynamics of a single driven
square potential barrier with harmonically oscillating position is performed.
The system exhibits dynamical trapping which is associated with the existence
of a stable island in phase space. Due to the unstable periodic orbits of the
KAM-structure, the driven barrier is a chaotic scatterer and shows stickiness
of scattering trajectories in the vicinity of the stable island. The
transmission function of a suitably prepared ensemble yields results which are
very similar to tunneling resonances in the quantum mechanical regime. However,
the origin of these resonances is different in the classical regime.Comment: 14 page
Single-shot qubit readout in circuit Quantum Electrodynamics
The future development of quantum information using superconducting circuits
requires Josephson qubits [1] with long coherence times combined to a
high-fidelity readout. Major progress in the control of coherence has recently
been achieved using circuit quantum electrodynamics (cQED) architectures [2,
3], where the qubit is embedded in a coplanar waveguide resonator (CPWR) which
both provides a well controlled electromagnetic environment and serves as qubit
readout. In particular a new qubit design, the transmon, yields reproducibly
long coherence times [4, 5]. However, a high-fidelity single-shot readout of
the transmon, highly desirable for running simple quantum algorithms or measur-
ing quantum correlations in multi-qubit experiments, is still lacking. In this
work, we demonstrate a new transmon circuit where the CPWR is turned into a
sample-and-hold detector, namely a Josephson Bifurcation Amplifer (JBA) [6, 7],
which allows both fast measurement and single-shot discrimination of the qubit
states. We report Rabi oscillations with a high visibility of 94% together with
dephasing and relaxation times longer than 0:5 \mu\s. By performing two
subsequent measurements, we also demonstrate that this new readout does not
induce extra qubit relaxation.Comment: 14 pages including 4 figures, preprint forma
Measurement of Longitudinal Spin Transfer to Lambda Hyperons in Deep-Inelastic Lepton Scattering
Spin transfer in deep-inelastic Lambda electroproduction has been studied
with the HERMES detector using the 27.6 GeV polarized positron beam in the HERA
storage ring. For an average fractional energy transfer = 0.45, the
longitudinal spin transfer from the virtual photon to the Lambda has been
extracted. The spin transfer along the Lambda momentum direction is found to be
0.11 +/- 0.17 (stat) +/- 0.03 (sys); similar values are found for other
possible choices for the longitudinal spin direction of the Lambda. This result
is the most precise value obtained to date from deep-inelastic scattering with
charged lepton beams, and is sensitive to polarized up quark fragmentation to
hyperon states. The experimental result is found to be in general agreement
with various models of the Lambda spin content, and is consistent with the
assumption of helicity conservation in the fragmentation process.Comment: 8 pages, 3 figures; new version has an expanded discussion and small
format change
Flavor Decomposition of the Polarized Quark Distributions in the Nucleon from Inclusive and Semi-inclusive Deep-inelastic Scattering
Spin asymmetries of semi-inclusive cross sections for the production of
positively and negatively charged hadrons have been measured in deep-inelastic
scattering of polarized positrons on polarized hydrogen and 3He targets, in the
kinematic range 0.023<x<0.6 and 1 GeV^2<Q^2<10 GeV^2. Polarized quark
distributions are extracted as a function of x for up $(u+u_bar) and down
(d+d_bar) flavors. The up quark polarization is positive and the down quark
polarization is negative in the measured range. The polarization of the sea is
compatible with zero. The first moments of the polarized quark distributions
are presented. The isospin non-singlet combination Delta_q_3 is consistent with
the prediction based on the Bjorken sum rule. The moments of the polarized
quark distributions are compared to predictions based on SU(3)_f flavor
symmetry and to a prediction from lattice QCD.Comment: 14 pages, 6 figures (eps format), 10 tables in Latex New version
contains tables of asymmetries and correlation matri
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DNA methylation-based classification of central nervous system tumours.
Accurate pathological diagnosis is crucial for optimal management of patients with cancer. For the approximately 100 known tumour types of the central nervous system, standardization of the diagnostic process has been shown to be particularly challenging-with substantial inter-observer variability in the histopathological diagnosis of many tumour types. Here we present a comprehensive approach for the DNA methylation-based classification of central nervous system tumours across all entities and age groups, and demonstrate its application in a routine diagnostic setting. We show that the availability of this method may have a substantial impact on diagnostic precision compared to standard methods, resulting in a change of diagnosis in up to 12% of prospective cases. For broader accessibility, we have designed a free online classifier tool, the use of which does not require any additional onsite data processing. Our results provide a blueprint for the generation of machine-learning-based tumour classifiers across other cancer entities, with the potential to fundamentally transform tumour pathology
Resection of the primary tumour versus no resection prior to systemic therapy in patients with colon cancer and synchronous unresectable metastases (UICC stage IV): SYNCHRONOUS - a randomised controlled multicentre trial (ISRCTN30964555)
<p>Abstract</p> <p>Background</p> <p>Currently, it remains unclear, if patients with colon cancer and synchronous unresectable metastases who present without severe symptoms should undergo resection of the primary tumour prior to systemic chemotherapy. Resection of the primary tumour may be associated with significant morbidity and delays the beginning of chemotherapy. However, it may prevent local symptoms and may, moreover, prolong survival as has been demonstrated in patients with metastatic renal cell carcinoma. It is the aim of the present randomised controlled trial to evaluate the efficacy of primary tumour resection prior to systemic chemotherapy to prolong survival in patients with newly diagnosed colon cancer who are not amenable to curative therapy.</p> <p>Methods/design</p> <p>The SYNCHRONOUS trial is a multicentre, randomised, controlled, superiority trial with a two-group parallel design. Colon cancer patients with synchronous unresectable metastases are eligible for inclusion. Exclusion criteria are primary tumour-related symptoms, inability to tolerate surgery and/or systemic chemotherapy and history of another primary cancer. Resection of the primary tumour as well as systemic chemotherapy is provided according to the standards of the participating institution. The primary endpoint is overall survival that is assessed with a minimum follow-up of 36 months. Furthermore, it is the objective of the trial to assess the safety of both treatment strategies as well as quality of life.</p> <p>Discussion</p> <p>The SYNCHRONOUS trial is a multicentre, randomised, controlled trial to assess the efficacy and safety of primary tumour resection before beginning of systemic chemotherapy in patients with metastatic colon cancer not amenable to curative therapy.</p> <p>Trial registration</p> <p><a href="http://www.controlled-trials.com/ISRCTN30964555">ISRCTN30964555</a></p
The genomes of two key bumblebee species with primitive eusocial organization
Background: The shift from solitary to social behavior is one of the major evolutionary transitions. Primitively eusocial bumblebees are uniquely placed to illuminate the evolution of highly eusocial insect societies. Bumblebees are also invaluable natural and agricultural pollinators, and there is widespread concern over recent population declines in some species. High-quality genomic data will inform key aspects of bumblebee biology, including susceptibility to implicated population viability threats. Results: We report the high quality draft genome sequences of Bombus terrestris and Bombus impatiens, two ecologically dominant bumblebees and widely utilized study species. Comparing these new genomes to those of the highly eusocial honeybee Apis mellifera and other Hymenoptera, we identify deeply conserved similarities, as well as novelties key to the biology of these organisms. Some honeybee genome features thought to underpin advanced eusociality are also present in bumblebees, indicating an earlier evolution in the bee lineage. Xenobiotic detoxification and immune genes are similarly depauperate in bumblebees and honeybees, and multiple categories of genes linked to social organization, including development and behavior, show high conservation. Key differences identified include a bias in bumblebee chemoreception towards gustation from olfaction, and striking differences in microRNAs, potentially responsible for gene regulation underlying social and other traits. Conclusions: These two bumblebee genomes provide a foundation for post-genomic research on these key pollinators and insect societies. Overall, gene repertoires suggest that the route to advanced eusociality in bees was mediated by many small changes in many genes and processes, and not by notable expansion or depauperation
Interest groups in multiple streams:specifying their involvement in the framework
Although interests inhabit a central place in the multiple streams framework (MSF), interest groups have played only a minor role in theoretical and empirical studies until now. In Kingdon’s original conception, organized interests are a key variable in the politics stream. Revisiting Kingdon’s concept with a particular focus on interest groups and their activities—in different streams and at various levels—in the policy process, we take this argument further. In particular, we argue that specifying groups’ roles in other streams adds value to the explanatory power of the framework. To do this, we look at how interest groups affect problems, policies, and politics. The influence of interest groups within the streams is explained by linking the MSF with literature on interest intermediation. We show that depending on the number of conditions and their activity level, interest groups can be involved in all three streams. We illustrate this in case studies reviewing labor market policies in Germany and chemicals regulation at the European level
Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells
Cellular differentiation entails reprogramming of the transcriptome from a
pluripotent to a unipotent fate. This process was suggested to coincide with a
global increase of repressive heterochromatin, which results in a reduction of
transcriptional plasticity and potential. Here we report the dynamics of the
transcriptome and an abundant heterochromatic histone modification,
dimethylation of histone H3 at lysine 9 (H3K9me2), during neuronal
differentiation of embryonic stem cells. In contrast to the prevailing model, we
find H3K9me2 to occupy over 50% of chromosomal regions already in stem
cells. Marked are most genomic regions that are devoid of transcription and a
subgroup of histone modifications. Importantly, no global increase occurs during
differentiation, but discrete local changes of H3K9me2 particularly at genic
regions can be detected. Mirroring the cell fate change, many genes show altered
expression upon differentiation. Quantitative sequencing of transcripts
demonstrates however that the total number of active genes is equal between stem
cells and several tested differentiated cell types. Together, these findings
reveal high prevalence of a heterochromatic mark in stem cells and challenge the
model of low abundance of epigenetic repression and resulting global basal level
transcription in stem cells. This suggests that cellular differentiation entails
local rather than global changes in epigenetic repression and transcriptional
activity
Contribution of Social Isolation, Restraint, and Hindlimb Unloading to Changes in Hemodynamic Parameters and Motion Activity in Rats
The most accepted animal model for simulation of the physiological and morphological consequences of microgravity on the cardiovascular system is one of head-down hindlimb unloading. Experimental conditions surrounding this model include not only head-down tilting of rats, but also social and restraint stresses that have their own influences on cardiovascular system function. Here, we studied levels of spontaneous locomotor activity, blood pressure, and heart rate during 14 days under the following experimental conditions: cage control, social isolation in standard rat housing, social isolation in special cages for hindlimb unloading, horizontal attachment (restraint), and head-down hindlimb unloading. General activity and hemodynamic parameters were continuously monitored in conscious rats by telemetry. Heart rate and blood pressure were both evaluated during treadmill running to reveal cardiovascular deconditioning development as a result of unloading. The main findings of our work are that: social isolation and restraint induced persistent physical inactivity, while unloading in rats resulted in initial inactivity followed by normalization and increased locomotion after one week. Moreover, 14 days of hindlimb unloading showed significant elevation of blood pressure and slight elevation of heart rate. Hemodynamic changes in isolated and restrained rats largely reproduced the trends observed during unloading. Finally, we detected no augmentation of tachycardia during moderate exercise in rats after 14 days of unloading. Thus, we concluded that both social isolation and restraint, as an integral part of the model conditions, contribute essentially to cardiovascular reactions during head-down hindlimb unloading, compared to the little changes in the hydrostatic gradient
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