Lessons learned: rearing the crown-boring weevil, Ceutorhynchus scrobicollis (Coleoptera: Curculionidae), in containment for biological control of garlic mustard (Alliaria petiolata)

In this paper, we describe lessons learned and protocols developed after a decade of rearing Ceutorhynchus scrobicollis Nerenscheimer and Wagner in a Biosafety Level 2 containment facility. We have developed these protocols in anticipation of approval to release C. scrobicollis in North America for the biocontrol of garlic mustard. The rearing protocol tried to minimize the potential of attack by the adult parasitoid, Perilitus conseutor, which may be present in field collected C. scrobicollis from Europe to prevent inadvertent introduction of parasitoids into North America. All C. scrobicollis used for our quarantine rearing were field collected near Berlin, Germany. We have successfully reared C. scrobicollis on caged garlic mustard plants in a growth chamber by alternating temperatures and photoperiods to simulate those in its native range. In Germany, C. scrobicollis produces one generation per year and F1 adults emerge in late May. In containment, a new generation of adults emerged an average of 108 days after adults were placed on plants. We found the optimal time spent to collect F1 adults was four weeks after the appearance of the first F1 adult, with 95% of potential adults collected. Simulating a three-month summer aestivation period, followed by a week of fall, and three weeks of winter conditions resulted in optimum levels of oviposition in F1 females. Larvae first hatched 8- to-10 days after adults were placed on plants at 15/14 C day/night temperatures with a 9.5 hour photoperiod. We therefore recommend that C. scrobicollis adults are removed from garlic mustard rosettes after 8 days. This will maximize the period of female oviposition while minimizing the time when larvae are available for attack from P. conseutor

Lessons learned: rearing the crown-boring weevil, Ceutorhynchus scrobicollis (Coleoptera: Curculionidae), in containment for biological control of garlic mustard (Alliaria petiolata)

In this paper, we describe lessons learned and protocols developed after a decade of rearing Ceutorhynchus scrobicollis Nerenscheimer and Wagner in a Biosafety Level 2 containment facility. We have developed these protocols in anticipation of approval to release C. scrobicollis in North America for the biocontrol of garlic mustard. The rearing protocol tried to minimize the potential of attack by the adult parasitoid, Perilitus conseutor, which may be present in field collected C. scrobicollis from Europe to prevent inadvertent introduction of parasitoids into North America. All C. scrobicollis used for our quarantine rearing were field collected near Berlin, Germany. We have successfully reared C. scrobicollis on caged garlic mustard plants in a growth chamber by alternating temperatures and photoperiods to simulate those in its native range. In Germany, C. scrobicollis produces one generation per year and F1 adults emerge in late May. In containment, a new generation of adults emerged an average of 108 days after adults were placed on plants. We found the optimal time spent to collect F1 adults was four weeks after the appearance of the first F1 adult, with 95% of potential adults collected. Simulating a three-month summer aestivation period, followed by a week of fall, and three weeks of winter conditions resulted in optimum levels of oviposition in F1 females. Larvae first hatched 8- to-10 days after adults were placed on plants at 15/14 C day/night temperatures with a 9.5 hour photoperiod. We therefore recommend that C. scrobicollis adults are removed from garlic mustard rosettes after 8 days. This will maximize the period of female oviposition while minimizing the time when larvae are available for attack from P. conseutor

Extracting information from the text of electronic medical records to improve case detection: a systematic review

Background: Electronic medical records (EMRs) are revolutionizing health-related research. One key issue for study quality is the accurate identification of patients with the condition of interest. Information in EMRs can be entered as structured codes or unstructured free text. The majority of research studies have used only coded parts of EMRs for case-detection, which may bias findings, miss cases, and reduce study quality. This review examines whether incorporating information from text into case-detection algorithms can improve research quality. Methods: A systematic search returned 9659 papers, 67 of which reported on the extraction of information from free text of EMRs with the stated purpose of detecting cases of a named clinical condition. Methods for extracting information from text and the technical accuracy of case-detection algorithms were reviewed. Results: Studies mainly used US hospital-based EMRs, and extracted information from text for 41 conditions using keyword searches, rule-based algorithms, and machine learning methods. There was no clear difference in case-detection algorithm accuracy between rule-based and machine learning methods of extraction. Inclusion of information from text resulted in a significant improvement in algorithm sensitivity and area under the receiver operating characteristic in comparison to codes alone (median sensitivity 78% (codes + text) vs 62% (codes), P = .03; median area under the receiver operating characteristic 95% (codes + text) vs 88% (codes), P = .025). Conclusions: Text in EMRs is accessible, especially with open source information extraction algorithms, and significantly improves case detection when combined with codes. More harmonization of reporting within EMR studies is needed, particularly standardized reporting of algorithm accuracy metrics like positive predictive value (precision) and sensitivity (recall)

Seasonal cycle of CO2 from the sea ice edge to island blooms in the Scotia Sea, Southern Ocean

The Scotia Sea region contains some of the most productive waters of the Southern Ocean. It is also a dynamic region through the interaction of deep water masses with the atmosphere. We present a first seasonally-resolved time series of the fugacity of CO2 (fCO2) from spring 2006, summer 2008, autumn 2009 and winter (potential temperature minimum) along a 1000 km transect from the pack ice to the Polar Front to quantify the effects of biology and temperature on oceanic fCO2. Substantial spring and summer decreases in sea surface fCO2 occurred in phytoplankton blooms that developed in the naturally iron fertilised waters downstream (north) of South Georgia island (54-55S, 36-38W) and following sea ice melt (in the seasonal ice zone). The largest seasonal fCO2 amplitude (fCO2) of 159 uatm was found in the South Georgia bloom. In this region, biological carbon uptake dominated the seasonal signal, reducing the winter maxima in oceanic fCO2 by 257 uatm by the summer. In the Weddell-Scotia Confluence, the southern fringe of the Scotia Sea, the shift from wintertime CO2-rich conditions in ice covered waters to CO2 undersaturation in the spring blooms during and upon sea ice melt created strong seasonality in oceanic fCO2. Temperature effects on oceanic fCO2 ranged from fCO2sst of 55 uatm in the seasonal ice zone to almost double that downstream of South Georgia (98 uatm). The seasonal cycle of surface water fCO2 in the high-nutrient low-chlorophyll region of the central Scotia Sea had the weakest biological control and lowest seasonality. Basin-wide biological processes dominated the seasonal control on oceanic fCO2 (fCO2bio of 159 μatm), partially compensated (43%) by moderate temperature control (fCO2sst of 68 μatm). The patchwork of productivity across the Scotia Sea creates regions of seasonally strong biological uptake of CO2 in the Southern Ocean

The UniProt-GO Annotation database in 2011

The GO annotation dataset provided by the UniProt Consortium (GOA: http://www.ebi.ac.uk/GOA) is a comprehensive set of evidenced-based associations between terms from the Gene Ontology resource and UniProtKB proteins. Currently supplying over 100 million annotations to 11 million proteins in more than 360 000 taxa, this resource has increased 2-fold over the last 2 years and has benefited from a wealth of checks to improve annotation correctness and consistency as well as now supplying a greater information content enabled by GO Consortium annotation format developments. Detailed, manual GO annotations obtained from the curation of peer-reviewed papers are directly contributed by all UniProt curators and supplemented with manual and electronic annotations from 36 model organism and domain-focused scientific resources. The inclusion of high-quality, automatic annotation predictions ensures the UniProt GO annotation dataset supplies functional information to a wide range of proteins, including those from poorly characterized, non-model organism species. UniProt GO annotations are freely available in a range of formats accessible by both file downloads and web-based views. In addition, the introduction of a new, normalized file format in 2010 has made for easier handling of the complete UniProt-GOA data se

Three Linked Vasculopathic Processes Characterize Kawasaki Disease: A Light and Transmission Electron Microscopic Study

Kawasaki disease is recognized as the most common cause of acquired heart disease in children in the developed world. Clinical, epidemiologic, and pathologic evidence supports an infectious agent, likely entering through the lung. Pathologic studies proposing an acute coronary arteritis followed by healing fail to account for the complex vasculopathy and clinical course.Specimens from 32 autopsies, 8 cardiac transplants, and an excised coronary aneurysm were studied by light (n=41) and transmission electron microscopy (n=7). Three characteristic vasculopathic processes were identified in coronary (CA) and non-coronary arteries: acute self-limited necrotizing arteritis (NA), subacute/chronic (SA/C) vasculitis, and luminal myofibroblastic proliferation (LMP). NA is a synchronous neutrophilic process of the endothelium, beginning and ending within the first two weeks of fever onset, and progressively destroying the wall into the adventitia causing saccular aneurysms, which can thrombose or rupture. SA/C vasculitis is an asynchronous process that can commence within the first two weeks onward, starting in the adventitia/perivascular tissue and variably inflaming/damaging the wall during progression to the lumen. Besides fusiform and saccular aneurysms that can thrombose, SA/C vasculitis likely causes the transition of medial and adventitial smooth muscle cells (SMC) into classic myofibroblasts, which combined with their matrix products and inflammation create progressive stenosing luminal lesions (SA/C-LMP). Remote LMP apparently results from circulating factors. Veins, pulmonary arteries, and aorta can develop subclinical SA/C vasculitis and SA/C-LMP, but not NA. The earliest death (day 10) had both CA SA/C vasculitis and SA/C-LMP, and an "eosinophilic-type" myocarditis.NA is the only self-limiting process of the three, is responsible for the earliest morbidity/mortality, and is consistent with acute viral infection. SA/C vasculitis can begin as early as NA, but can occur/persist for months to years; LMP causes progressive arterial stenosis and thrombosis and is composed of unique SMC-derived pathologic myofibroblasts

The James Webb Space Telescope Mission

Twenty-six years ago a small committee report, building on earlier studies, expounded a compelling and poetic vision for the future of astronomy, calling for an infrared-optimized space telescope with an aperture of at least $4m$. With the support of their governments in the US, Europe, and Canada, 20,000 people realized that vision as the $6.5m$ James Webb Space Telescope. A generation of astronomers will celebrate their accomplishments for the life of the mission, potentially as long as 20 years, and beyond. This report and the scientific discoveries that follow are extended thank-you notes to the 20,000 team members. The telescope is working perfectly, with much better image quality than expected. In this and accompanying papers, we give a brief history, describe the observatory, outline its objectives and current observing program, and discuss the inventions and people who made it possible. We cite detailed reports on the design and the measured performance on orbit.Comment: Accepted by PASP for the special issue on The James Webb Space Telescope Overview, 29 pages, 4 figure

Models of classroom assessment for course-based research experiences

Course-based research pedagogy involves positioning students as contributors to authentic research projects as part of an engaging educational experience that promotes their learning and persistence in science. To develop a model for assessing and grading students engaged in this type of learning experience, the assessment aims and practices of a community of experienced course-based research instructors were collected and analyzed. This approach defines four aims of course-based research assessment—(1) Assessing Laboratory Work and Scientific Thinking; (2) Evaluating Mastery of Concepts, Quantitative Thinking and Skills; (3) Appraising Forms of Scientific Communication; and (4) Metacognition of Learning—along with a set of practices for each aim. These aims and practices of assessment were then integrated with previously developed models of course-based research instruction to reveal an assessment program in which instructors provide extensive feedback to support productive student engagement in research while grading those aspects of research that are necessary for the student to succeed. Assessment conducted in this way delicately balances the need to facilitate students’ ongoing research with the requirement of a final grade without undercutting the important aims of a CRE education

A História da Alimentação: balizas historiográficas

Os M. pretenderam traçar um quadro da História da Alimentação, não como um novo ramo epistemológico da disciplina, mas como um campo em desenvolvimento de práticas e atividades especializadas, incluindo pesquisa, formação, publicações, associações, encontros acadêmicos, etc. Um breve relato das condições em que tal campo se assentou faz-se preceder de um panorama dos estudos de alimentação e temas correia tos, em geral, segundo cinco abardagens Ia biológica, a econômica, a social, a cultural e a filosófica!, assim como da identificação das contribuições mais relevantes da Antropologia, Arqueologia, Sociologia e Geografia. A fim de comentar a multiforme e volumosa bibliografia histórica, foi ela organizada segundo critérios morfológicos. A seguir, alguns tópicos importantes mereceram tratamento à parte: a fome, o alimento e o domínio religioso, as descobertas européias e a difusão mundial de alimentos, gosto e gastronomia. O artigo se encerra com um rápido balanço crítico da historiografia brasileira sobre o tema

To Titrate or Not to Titrate: Factors influencing inpatient insulin management by residents and medical students

The prevalence of diabetes continues to rise, making inpatient management of diabetes an increasingly relevant issue. In teaching hospitals such as those affiliated with the University of Calgary, inpatient management of diabetes is often the responsibility of learners including residents and medical students. Several studies have demonstrated that learners lack knowledge and confidence in inpatient insulin management. To improve the way learners are taught about inpatient insulin titration, we sought to elucidate what contextual factors and mechanisms of an educational intervention are more likely to improve glycemic outcomes, and what factors, both conscious and subconscious, learners consider when making decisions about insulin titration. To determine the contextual factors and mechanisms of successful diabetes educational interventions, we conducted a realist synthesis. After analysing 21 studies, we found that interventions that improve the insulin prescribing process are necessary but not sufficient to improve glycemic outcomes. In-person, group, prescriber-specific interventions with a reinforcing intervention are more likely to be successful. To study the factors that learners consider when titrating insulin, we conducted a mixed methods study using a case-based survey loosely modelled on script concordance testing. We found that medical students prescribed insulin with greater concordance with staff endocrinologists than residents, yet residents had more confidence than medical students in their prescribing practices. Overall, the residents prescribed larger doses of insulin. The residents were susceptible to the subconscious influence of the seniority of the nurse asking for an insulin dose, yet the medical students were not. Both groups of learners prescribed more insulin in the presence of ketones and less when the patient had hypoglycemia unawareness. Residents prescribed less insulin when patients had T2DM compared to T1DM and medical students prescribed more when the blood sugar crossed the 20mmol/L threshold. We concluded that patient, prescriber, and systems factors ultimately influenced insulin prescribing practices. Overall, we concluded that a successful educational intervention to improve inpatient glycemic control would likely need to address prescribing practices in a prescriber-specific fashion and be followed with a reinforcing intervention. We proposed that medical students and residents may need different teaching methods to address possibly different cognitive processing methods