Stochastic Resonance in Two Dimensional Landau Ginzburg Equation

We study the mechanism of stochastic resonance in a two dimensional Landau Ginzburg equation perturbed by a white noise. We shortly review how to renormalize the equation in order to avoid ultraviolet divergences. Next we show that the renormalization amplifies the effect of the small periodic perturbation in the system. We finally argue that stochastic resonance can be used to highlight the effect of renormalization in spatially extended system with a bistable equilibria

The Ursinus Weekly, February 22, 1954

Eighty-eight are on Dean\u27s list first semester • W. Hansen, second seminar speaker • Ruby 2/3 completed; Class of \u2754 show, Mar. 5 • Price, court elected royalty for May Day • French Club sponsors movie; Will give play • Naval aviation cadet man to visit UC, tell of program • Ursinus quartet sings for Rotary\u27s ladies night • Student exchange program, subject of forum, Wed. • Greek columns • Quinn discusses criteria for judging paintings • Mizz Test is play director • Pre-meds visit Phila. College of Osteopathy • AAUW will introduce its aims to senior women • Editorials: Expostulation and reply • Supply store: To be or not to be • Letters to the editor • Ursinus men make gay debut in social season highlight • Save the Supply: Patronize it! • Little known facts revealed on Washington\u27s birthday • Belles trounce Beaver in second win, 51-35 • Badminton team goes down to Penn; Defeats Drexel • J.V. Belles win over Beaver, 48-21 • Cub swimmers splash past Beavers, 29 to 23 • Mermaids lose to Beaver in thrilling meet, 31-26 • Matmen trounce Fords; Win four bouts, 18-13 • Textile drops Cagemen, 61-50 • Three falls fail to halt Bucknell • Badminton team in 3-2 victory • Swarthmore tops Cagers; Big man hurts Bearshttps://digitalcommons.ursinus.edu/weekly/1489/thumbnail.jp

Large Scale Semantic Annotation of Radiology Reports

poster abstractThe development and testing of automated information extraction (IE) systems depends on semantically annotated free text. This presentation reports on the results of a large scale annotation project of a radiology corpus, the Roentgen corpus, consisting of 594,000 deidentified radiology reports with 36 million words, and 4.3 million sentences supplied by Indiana University. The presentation highlights the (1) sentence-based approach in defining propositions annotating the corpus, (2) as well as the annotation framework that is incrementally built and refined in order to facilitate the process of annotation

Automatic detection of protected health information from clinic narratives

This paper presents a natural language processing (NLP) system that was designed to participate in the 2014 i2b2 de-identification challenge. The challenge task aims to identify and classify seven main Protected Health Information (PHI) categories and 25 associated sub categories. A hybrid model was proposed which combines machine learning techniques with keyword-based and rule based approaches to deal with the complexity inherent in PHI categories. Our proposed approaches exploit a rich set of linguistic features, both syntactic and word surface-oriented, which are further enriched by task specific features and regular expression template patterns to characterize the semantics of various PHI categories. Our system achieved promising accuracy on the challenge test data with an overall micro-averaged F measure of 93.6%, which was the winner of this de-identification challenge

Relaxation Height in Energy Landscapes: an Application to Multiple Metastable States

The study of systems with multiple (not necessarily degenerate) metastable states presents subtle difficulties from the mathematical point of view related to the variational problem that has to be solved in these cases. We introduce the notion of relaxation height in a general energy landscape and we prove sufficient conditions which are valid even in presence of multiple metastable states. We show how these results can be used to approach the problem of multiple metastable states via the use of the modern theories of metastability. We finally apply these general results to the Blume--Capel model for a particular choice of the parameters ensuring the existence of two multiple, and not degenerate in energy, metastable states

Residence probability control

The problem of controlling the residence probability of linear stochastic systems in a bounded domain is considered. Necessary and sufficient conditions for the existence of a controller that makes the residence probability positive (weakly residence probability controllable systems) and arbitrarily close to one (strongly residence probability controllable systems) are derived. The approach is based on the modern large deviations theory for systems perturbed by small white noise.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/28811/1/0000645.pd

Extracting information from the text of electronic medical records to improve case detection: a systematic review

Background: Electronic medical records (EMRs) are revolutionizing health-related research. One key issue for study quality is the accurate identification of patients with the condition of interest. Information in EMRs can be entered as structured codes or unstructured free text. The majority of research studies have used only coded parts of EMRs for case-detection, which may bias findings, miss cases, and reduce study quality. This review examines whether incorporating information from text into case-detection algorithms can improve research quality. Methods: A systematic search returned 9659 papers, 67 of which reported on the extraction of information from free text of EMRs with the stated purpose of detecting cases of a named clinical condition. Methods for extracting information from text and the technical accuracy of case-detection algorithms were reviewed. Results: Studies mainly used US hospital-based EMRs, and extracted information from text for 41 conditions using keyword searches, rule-based algorithms, and machine learning methods. There was no clear difference in case-detection algorithm accuracy between rule-based and machine learning methods of extraction. Inclusion of information from text resulted in a significant improvement in algorithm sensitivity and area under the receiver operating characteristic in comparison to codes alone (median sensitivity 78% (codes + text) vs 62% (codes), P = .03; median area under the receiver operating characteristic 95% (codes + text) vs 88% (codes), P = .025). Conclusions: Text in EMRs is accessible, especially with open source information extraction algorithms, and significantly improves case detection when combined with codes. More harmonization of reporting within EMR studies is needed, particularly standardized reporting of algorithm accuracy metrics like positive predictive value (precision) and sensitivity (recall)

Automatic de-identification of textual documents in the electronic health record: a review of recent research

<p>Abstract</p> <p>Background</p> <p>In the United States, the Health Insurance Portability and Accountability Act (HIPAA) protects the confidentiality of patient data and requires the informed consent of the patient and approval of the Internal Review Board to use data for research purposes, but these requirements can be waived if data is de-identified. For clinical data to be considered de-identified, the HIPAA "Safe Harbor" technique requires 18 data elements (called PHI: Protected Health Information) to be removed. The de-identification of narrative text documents is often realized manually, and requires significant resources. Well aware of these issues, several authors have investigated automated de-identification of narrative text documents from the electronic health record, and a review of recent research in this domain is presented here.</p> <p>Methods</p> <p>This review focuses on recently published research (after 1995), and includes relevant publications from bibliographic queries in PubMed, conference proceedings, the ACM Digital Library, and interesting publications referenced in already included papers.</p> <p>Results</p> <p>The literature search returned more than 200 publications. The majority focused only on structured data de-identification instead of narrative text, on image de-identification, or described manual de-identification, and were therefore excluded. Finally, 18 publications describing automated text de-identification were selected for detailed analysis of the architecture and methods used, the types of PHI detected and removed, the external resources used, and the types of clinical documents targeted. All text de-identification systems aimed to identify and remove person names, and many included other types of PHI. Most systems used only one or two specific clinical document types, and were mostly based on two different groups of methodologies: pattern matching and machine learning. Many systems combined both approaches for different types of PHI, but the majority relied only on pattern matching, rules, and dictionaries.</p> <p>Conclusions</p> <p>In general, methods based on dictionaries performed better with PHI that is rarely mentioned in clinical text, but are more difficult to generalize. Methods based on machine learning tend to perform better, especially with PHI that is not mentioned in the dictionaries used. Finally, the issues of anonymization, sufficient performance, and "over-scrubbing" are discussed in this publication.</p

Fluctuations in Nonequilibrium Statistical Mechanics: Models, Mathematical Theory, Physical Mechanisms

The fluctuations in nonequilibrium systems are under intense theoretical and experimental investigation. Topical ``fluctuation relations'' describe symmetries of the statistical properties of certain observables, in a variety of models and phenomena. They have been derived in deterministic and, later, in stochastic frameworks. Other results first obtained for stochastic processes, and later considered in deterministic dynamics, describe the temporal evolution of fluctuations. The field has grown beyond expectation: research works and different perspectives are proposed at an ever faster pace. Indeed, understanding fluctuations is important for the emerging theory of nonequilibrium phenomena, as well as for applications, such as those of nanotechnological and biophysical interest. However, the links among the different approaches and the limitations of these approaches are not fully understood. We focus on these issues, providing: a) analysis of the theoretical models; b) discussion of the rigorous mathematical results; c) identification of the physical mechanisms underlying the validity of the theoretical predictions, for a wide range of phenomena.Comment: 44 pages, 2 figures. To appear in Nonlinearity (2007