2,143 research outputs found
Classification of non-Riemannian doubled-yet-gauged spacetime
Assuming covariant fields as the `fundamental' variables,
Double Field Theory can accommodate novel geometries where a Riemannian metric
cannot be defined, even locally. Here we present a complete classification of
such non-Riemannian spacetimes in terms of two non-negative integers,
, . Upon these backgrounds, strings become
chiral and anti-chiral over and directions respectively, while
particles and strings are frozen over the directions. In
particular, we identify as Riemannian manifolds, as
non-relativistic spacetime, as Gomis-Ooguri non-relativistic string,
as ultra-relativistic Carroll geometry, and as Siegel's
chiral string. Combined with a covariant Kaluza-Klein ansatz which we further
spell, leads to Newton-Cartan gravity. Alternative to the conventional
string compactifications on small manifolds, non-Riemannian spacetime such as
, may open a new scheme of the dimensional reduction from ten to
four.Comment: 1+41 pages; v2) Refs added; v3) Published version; v4) Sign error in
(2.51) correcte
NARROMI: a noise and redundancy reduction technique improves accuracy of gene regulatory network inference.
MOTIVATION: Reconstruction of gene regulatory networks (GRNs) is of utmost interest to biologists and is vital for understanding the complex regulatory mechanisms within the cell. Despite various methods developed for reconstruction of GRNs from gene expression profiles, they are notorious for high false positive rate owing to the noise inherited in the data, especially for the dataset with a large number of genes but a small number of samples.
RESULTS: In this work, we present a novel method, namely NARROMI, to improve the accuracy of GRN inference by combining ordinary differential equation-based recursive optimization (RO) and information theory-based mutual information (MI). In the proposed algorithm, the noisy regulations with low pairwise correlations are first removed by using MI, and the redundant regulations from indirect regulators are further excluded by RO to improve the accuracy of inferred GRNs. In particular, the RO step can help to determine regulatory directions without prior knowledge of regulators. The results on benchmark datasets from Dialogue for Reverse Engineering Assessments and Methods challenge and experimentally determined GRN of Escherichia coli show that NARROMI significantly outperforms other popular methods in terms of false positive rates and accuracy.
AVAILABILITY: All the source data and code are available at: http://csb.shu.edu.cn/narromi.htm
Aharonov-Casher effect for spin one particles in a noncommutative space
In this work the Aharonov-Casher (AC) phase is calculated for spin one
particles in a noncommutative space. The AC phase has previously been
calculated from the Dirac equation in a noncommutative space using a gauge-like
technique [17]. In the spin-one, we use kemmer equation to calculate the phase
in a similar manner. It is shown that the holonomy receives non-trivial
kinematical corrections. By comparing the new result with the already known
spin 1/2 case, one may conjecture a generalized formula for the corrections to
holonomy for higher spins.Comment: 9 page
Detours and Paths: BRST Complexes and Worldline Formalism
We construct detour complexes from the BRST quantization of worldline
diffeomorphism invariant systems. This yields a method to efficiently extract
physical quantum field theories from particle models with first class
constraint algebras. As an example, we show how to obtain the Maxwell detour
complex by gauging N=2 supersymmetric quantum mechanics in curved space. Then
we concentrate on first class algebras belonging to a class of recently
introduced orthosymplectic quantum mechanical models and give generating
functions for detour complexes describing higher spins of arbitrary symmetry
types. The first quantized approach facilitates quantum calculations and we
employ it to compute the number of physical degrees of freedom associated to
the second quantized, field theoretical actions.Comment: 1+35 pages, 1 figure; typos corrected and references added, published
versio
Landau Analog Levels for Dipoles in the Noncommutative Space and Phase Space
In the present contribution we investigate the Landau analog energy
quantization for neutral particles, that possesses a nonzero permanent magnetic
and electric dipole moments, in the presence of an homogeneous electric and
magnetic external fields in the context of the noncommutative quantum
mechanics. Also, we analyze the Landau--Aharonov--Casher and
Landau--He--McKellar--Wilkens quantization due to noncommutative quantum
dynamics of magnetic and electric dipoles in the presence of an external
electric and magnetic fields and the energy spectrum and the eigenfunctions are
obtained. Furthermore, we have analyzed Landau quantization analogs in the
noncommutative phase space, and we obtain also the energy spectrum and the
eigenfunctions in this context.Comment: 20 pages, references adde
A combined first and second order variational approach for image reconstruction
In this paper we study a variational problem in the space of functions of
bounded Hessian. Our model constitutes a straightforward higher-order extension
of the well known ROF functional (total variation minimisation) to which we add
a non-smooth second order regulariser. It combines convex functions of the
total variation and the total variation of the first derivatives. In what
follows, we prove existence and uniqueness of minimisers of the combined model
and present the numerical solution of the corresponding discretised problem by
employing the split Bregman method. The paper is furnished with applications of
our model to image denoising, deblurring as well as image inpainting. The
obtained numerical results are compared with results obtained from total
generalised variation (TGV), infimal convolution and Euler's elastica, three
other state of the art higher-order models. The numerical discussion confirms
that the proposed higher-order model competes with models of its kind in
avoiding the creation of undesirable artifacts and blocky-like structures in
the reconstructed images -- a known disadvantage of the ROF model -- while
being simple and efficiently numerically solvable.Comment: 34 pages, 89 figure
An environmentally benign antimicrobial nanoparticle based on a silver-infused lignin core
Silver nanoparticles have antibacterial properties, but their use has been a cause for concern because they persist in the environment. Here, we show that lignin nanoparticles infused with silver ions and coated with a cationic polyelectrolyte layer form a biodegradable and green alternative to silver nanoparticles. The polyelectrolyte layer promotes the adhesion of the particles to bacterial cell membranes and, together with silver ions, can kill a broad spectrum of bacteria, including Escherichia coli, Pseudomonas aeruginosa and quaternary-amine-resistant Ralstonia sp. Ion depletion studies have shown that the bioactivity of these nanoparticles is time-limited because of the desorption of silver ions. High-throughput bioactivity screening did not reveal increased toxicity of the particles when compared to an equivalent mass of metallic silver nanoparticles or silver nitrate solution. Our results demonstrate that the application of green chemistry principles may allow the synthesis of nanoparticles with biodegradable cores that have higher antimicrobial activity and smaller environmental impact than metallic silver nanoparticles
Symptomatic and Asymptomatic Neurological Complications of Infective Endocarditis: Impact on Surgical Management and Prognosis
International audienceObjectives:Symptomatic neurological complications (NC) are a major cause of mortality in infective endocarditis (IE) but the impact of asymptomatic complications is unknown. We aimed to assess the impact of asymptomatic NC (AsNC) on the management and prognosis of IE.Methods: From the database of cases collected for a population-based study on IE, we selected 283 patients with definite left-sided IE who had undergone at least one neuroimaging procedure (cerebral CT scan and/or MRI) performed as part of initial evaluation.Results Among those 283 patients, 100 had symptomatic neurological complications (SNC) prior to the investigation, 35 had an asymptomatic neurological complications (AsNC), and 148 had a normal cerebral imaging (NoNC). The rate of valve surgery was 43% in the 100 patients with SNC, 77% in the 35 with AsNC, and 54% in the 148 with NoNC (p<0.001). In-hospital mortality was 42% in patients with SNC, 8.6% in patients with AsNC, and 16.9% in patients with NoNC (p<0.001). Among the 135 patients with NC, 95 had an indication for valve surgery (71%), which was performed in 70 of them (mortality 20%) and not performed in 25 (mortality 68%). In a multivariate adjusted analysis of the 135 patients with NC, age, renal failure, septic shock, and IE caused by S. aureus were independently associated with in-hospital and 1-year mortality. In addition SNC was an independent predictor of 1-year mortality.Conclusions The presence of NC was associated with a poorer prognosis when symptomatic. Patients with AsNC had the highest rate of valve surgery and the lowest mortality rate, which suggests a protective role of surgery guided by systematic neuroimaging results
Quantum criticality and black holes
Many condensed matter experiments explore the finite temperature dynamics of
systems near quantum critical points. Often, there are no well-defined
quasiparticle excitations, and so quantum kinetic equations do not describe the
transport properties completely. The theory shows that the transport
co-efficients are not proportional to a mean free scattering time (as is the
case in the Boltzmann theory of quasiparticles), but are completely determined
by the absolute temperature and by equilibrium thermodynamic observables.
Recently, explicit solutions of this quantum critical dynamics have become
possible via the AdS/CFT duality discovered in string theory. This shows that
the quantum critical theory provides a holographic description of the quantum
theory of black holes in a negatively curved anti-de Sitter space, and relates
its transport co-efficients to properties of the Hawking radiation from the
black hole. We review how insights from this connection have led to new results
for experimental systems: (i) the vicinity of the superfluid-insulator
transition in the presence of an applied magnetic field, and its possible
application to measurements of the Nernst effect in the cuprates, (ii) the
magnetohydrodynamics of the plasma of Dirac electrons in graphene and the
prediction of a hydrodynamic cyclotron resonance.Comment: 12 pages, 2 figures; Talk at LT25, Amsterda
Low Complexity Regularization of Linear Inverse Problems
Inverse problems and regularization theory is a central theme in contemporary
signal processing, where the goal is to reconstruct an unknown signal from
partial indirect, and possibly noisy, measurements of it. A now standard method
for recovering the unknown signal is to solve a convex optimization problem
that enforces some prior knowledge about its structure. This has proved
efficient in many problems routinely encountered in imaging sciences,
statistics and machine learning. This chapter delivers a review of recent
advances in the field where the regularization prior promotes solutions
conforming to some notion of simplicity/low-complexity. These priors encompass
as popular examples sparsity and group sparsity (to capture the compressibility
of natural signals and images), total variation and analysis sparsity (to
promote piecewise regularity), and low-rank (as natural extension of sparsity
to matrix-valued data). Our aim is to provide a unified treatment of all these
regularizations under a single umbrella, namely the theory of partial
smoothness. This framework is very general and accommodates all low-complexity
regularizers just mentioned, as well as many others. Partial smoothness turns
out to be the canonical way to encode low-dimensional models that can be linear
spaces or more general smooth manifolds. This review is intended to serve as a
one stop shop toward the understanding of the theoretical properties of the
so-regularized solutions. It covers a large spectrum including: (i) recovery
guarantees and stability to noise, both in terms of -stability and
model (manifold) identification; (ii) sensitivity analysis to perturbations of
the parameters involved (in particular the observations), with applications to
unbiased risk estimation ; (iii) convergence properties of the forward-backward
proximal splitting scheme, that is particularly well suited to solve the
corresponding large-scale regularized optimization problem
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