566 research outputs found
Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us
Leishmaniasis is a complex parasitic disease from a taxonomic, clinical and epidemiological point of view. The role of genetic exchanges has been questioned for over twenty years and their recent experimental demonstration along with the identification of interspecific hybrids in natura has revived this debate. After arguing that genetic exchanges were exceptional and did not contribute to Leishmania evolution, it is currently proposed that interspecific exchanges could be a major driving force for rapid adaptation to new reservoirs and vectors, expansion into new parasitic cycles and adaptation to new life conditions. To assess the existence of gene flows between species during evolution we used MLSA-based (MultiLocus Sequence Analysis) approach to analyze 222 Leishmania strains from Africa and Eurasia to accurately represent the genetic diversity of this genus. We observed a remarkable congruence of the phylogenetic signal and identified seven genetic clusters that include mainly independent lineages which are accumulating divergences without any sign of recent interspecific recombination. From a taxonomic point of view, the strong genetic structuration of the different species does not question the current classification, except for species that cause visceral forms of leishmaniasis (L. donovani, L. infantum and L. archibaldi). Although these taxa cause specific clinical forms of the disease and are maintained through different parasitic cycles, they are not clearly distinct and form a continuum, in line with the concept of species complex already suggested for this group thirty years ago. These results should have practical consequences concerning the molecular identification of parasites and the subsequent therapeutic management of the disease
Combining taxon-by-trait and taxon-by-site matrices for analysing trait patterns of macroinvertebrate communities: a rejoinder to Monaghan & Soares (2014)
In a recent paper, Heino, Schmera & Erős (2013) provided
an overview
of trait
58
patterns of stream communities from a macroecological perspective. In
this
paper
,
59
reference was made to
Gayraud
et al
. (2003)
,
who
showed that abundance
-
weighted
60
traits were less
powe
rful than presence
-
absence
weighted
traits
in discriminating
61
communities under different degrees of human impacts
,
and to
Statzner & Beche
62
(2010)
,
who therefore
advocated the use of
the second type of
weighting
for practical
63
biomonitoring due to logis
tic constrains (
e.g.
sorting of qualitative samples makes
64
3
assessment
program
me
s
more cost effective)
. H
eino
et al
. (2013)
pointed out
that
65
t
hese findings contradict
the
results
of
taxon
-
based analyses
which suggest that
,
if
66
taxa
are
weighted by their abund
ance
,
then
communities
are better separated
in
67
relation to environmental variation
than
when
taxa
are
weighted only by their
68
presence
.
Based on
an
overview of the literature,
Heino
et al
. (2013)
concluded that
69
results of presence
-
and
abundance
-
based analy
ses
should be evaluated
carefully
70
when examining traits
of organisms, because differences among studies can reflect
71
both methodological (i.e. handling of data) and real ecological differences
(see p.
72
1549 in H
eino
et al
., 2013
)
. More recently, Monaghan & S
oares (2014
)
stated that
(1)
73
H
eino
et al
. (2013)
identified the
weak explanatory power of abundance data as
a
74
major
limitation of macroinvertebrat
e trait analysis
and
that
(2)
the
log
-
transformation
75
of abundance data
may
cause
anomalies in
trait
-
based anal
yses.
W
e disagree with
76
both conclusions
, because (1) H
eino
et al
. (2013)
did not actually state
this
(see
77
above)
and because (2), in our view, log
-
transformation of abundance data in trait
-
78
based analyses
can
also
be
meaningful
.
To reveal the causes of
thes
e differ
ing views
,
79
we go through the examples provided by M
onaghan & Soares (2014)
and examine
80
how traits can be weighted by
the
presence, abundance and log
-
transformed
81
abundance
of the taxa
.
To do this, firs
t
we define
the
terminology
used here
, comment
82
o
n
the approach of M
onaghan & Soares (2014)
and show how
this procedure should
83
be performed
Habitat filtering determines spatial variation of macroinvertebrate community traits in northern headwater streams
Although our knowledge of the spatial distribution of stream organisms has been increasing rapidly in the last decades, there is still little consensus about trait-based variability of macroinvertebrate communities within and between catchments in near-pristine systems. Our aim was to examine the taxonomic and trait based stability vs. variability of stream macroinvertebrates in three high-latitude catchments in Finland. The collected taxa were assigned to unique trait combinations (UTCs) using biological traits. We found that only a single or a highly limited number of taxa formed a single UTC, suggesting a low degree of redundancy. Our analyses revealed significant differences in the environmental conditions of the streams among the three catchments. Linear models, rarefaction curves and beta-diversity measures showed that the catchments differed in both alpha and beta diversity. Taxon- and trait-based multivariate analyses also indicated that the three catchments were significantly different in terms of macroinvertebrate communities. All these findings suggest that habitat filtering, i.e., environmental differences among catchments, determines the variability of macroinvertebrate communities, thereby contributing to the significant biological differences among the catchments. The main implications of our study is that the sensitivity of trait-based analyses to natural environmental variation should be carefully incorporated in the assessment of environmental degradation, and that further studies are needed for a deeper understanding of trait-based community patterns across near-pristine streams
A trait-based approach reveals the feeding selectivity of a small endangered Mediterranean fish
Functional traits are growing in popularity in modern ecology, but feeding studies remain primarily rooted in a taxonomic-based perspective. However, consumers do not have any reason to select their prey using a taxonomic criterion, and prey assemblages are variable in space and time, which makes taxon-based studies assemblage-specific. To illustrate the benefits of the trait-based approach to assessing food choice, we studied the feeding ecology of the endangered freshwater fish Barbus meridionalis. We hypothesized that B. meridionalis is a selective predator which food choice depends on several prey morphological and behavioral traits, and thus, its top-down pressure may lead to changes in the functional composition of in-stream macroinvertebrate communities. Feeding selectivity was inferred by comparing taxonomic and functional composition (13 traits) between ingested and free-living potential prey using the Jacob's electivity index. Our results showed that the fish diet was influenced by 10 of the 13 traits tested. Barbus meridionalis preferred prey with a potential size of 5–10 mm, with a medium–high drift tendency, and that drift during daylight. Potential prey with no body flexibility, conical shape, concealment traits (presence of nets and/or cases, or patterned coloration), and high aggregation tendency had a low predation risk. Similarly, surface swimmers and interstitial taxa were low vulnerable to predation. Feeding selectivity altered the functional composition of the macroinvertebrate communities. Fish absence favored taxa with weak aggregation tendency, weak flexibility, and a relatively large size (10–20 mm of potential size). Besides, predatory invertebrates may increase in fish absence. In conclusion, our study shows that the incorporation of the trait-based approach in diet studies is a promising avenue to improve our mechanistic understanding of predator–prey interactions and to help predict the ecological outcomes of predator invasions and extinctions
Pleosporales
One hundred and five generic types of Pleosporales are described and illustrated. A brief introduction and detailed history with short notes on morphology, molecular phylogeny as well as a general conclusion of each genus are provided. For those genera where the type or a representative specimen is unavailable, a brief note is given. Altogether 174 genera of Pleosporales are treated. Phaeotrichaceae as well as Kriegeriella, Zeuctomorpha and Muroia are excluded from Pleosporales. Based on the multigene phylogenetic analysis, the suborder Massarineae is emended to accommodate five families, viz. Lentitheciaceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae and Trematosphaeriaceae
El periodismo deportivo y las TICS: la titulación y la bajada de la noticia en el tratamiento de la información periodística
En mi Beca EVC-CIN 2016 se analizó el rol de la imagen en la construcción de la noticia deportiva. Durante el proceso de investigación, apareció un nuevo interrogante: ¿qué pasa con el título y la bajada de las noticias? Es decir, analizar el rol de la imagen quedaba escueto e incompleto si este no se hacía en conjunto con un componente de real preponderancia, la titulación. Es por esto que la propuesta de este trabajo fue aportar una dimensión de análisis que permita comprender de forma integral como intervienen en la construcción de la noticia estos componentes en este contexto de auge de las nuevas tecnologías.Facultad de Periodismo y Comunicación Socia
The generality of changes in the trait composition of fish and invertebrate communities after flow restoration in a large river (French Rhône)
1. A multiple-trait-based approach can provide predictions and interpretations of the responses of freshwater communities to river restoration that apply in different taxonomic contexts. We compared the observed and predicted effects of restoration on sets of traits in fish and invertebrate communities in four reaches of the Rhône River. Restoration included minimum flow increases in three bypassed main channels and the reconnection of eight floodplain channels. 2. Predictions (described in detail in three other articles in this Special Issue) were based on habitat models that related the density of modelled taxa to their physical habitats. We used trait information extracted from the literature to translate predicted taxonomic changes into predicted changes in traits. Observed changes in traits calculated for modelled taxa and for all taxa in the community were both compared to predictions. 3. In 10 of 12 cases, observed changes in traits correlated with predicted ones. With few exceptions, the agreement was higher for fish and invertebrates in the main channels than for invertebrates in floodplain channels. Predictions translated to the trait category level improved those at the taxonomic level in 5/6 and 4/6 cases for modelled taxa and all taxa, respectively. However, the improvement was statistically significant according to a null model for 1/6 and 3/6 cases for modelled taxa and all taxa, respectively. 4. The validation of trait predictions suggested that traits related to locomotion and attachment, as well as general biology and physiology, were particularly suited to predicting and understanding the effects of physical restoration. For example, after restoration, clingers and passive filter feeders dominated invertebrate communities in the main channels, whereas invertebrate communities in the floodplain underwent a selection of traits frequent in running water (clingers, flattened shape and gill respiration). Within fish communities, the periodic life-history strategy that characterises fish species in downstream reaches (long life span, large body, late sexual maturity) increased with restoration, whereas the opportunistic strategy decreased. 5. Our results suggest that a better understanding of how hydraulics shapes traits in riverine systems is critically needed for assessing the effects of restoration measures impacting flow. In addition, existing trait databases (especially for fish) should be expanded to better reflect the energetic trade-offs that organisms must make in various flow contexts
El periodismo deportivo y las TICS: el rol de la imagen en el tratamiento de la información periodística
Esta investigación está enmarcada en la Beca de Estímulos Científicos 2016 del Consejo Interuniversitario Nacional (CIN) y retoma las preguntas que plantea el proyecto “Comunicación, Periodismo y Deporte. Análisis de la construcción de la información deportiva en los principales diarios argentinos”, desarrollado por docentes investigadores de la FPyCS, respecto a qué es noticia deportiva hoy y cuál es tu tratamiento. Este trabajo, a su vez, se enmarca en la cátedra Taller de Análisis de la Información de la Tecnicatura Superior Universitaria en Periodismo Deportivo, en donde soy adscripta desde el año 2013 hasta la actualidad. En este marco, este trabajo tiene como finalidad describir y analizar la construcción de la noticia deportiva, tomando como objeto de estudio el rol de la imagen en el tratamiento de la información. Se seleccionó como material de análisis por un lado, el portal web del diario deportivo “Olé”, y por el otro la versión online del suplemento deportivo del diario La Nación “Cancha Llena” durante el desarrollo de los Juegos Olímpicos de Río de Janeiro 2016, desde la ceremonia inaugural y hasta el último evento deportivo.Facultad de Periodismo y Comunicación Socia
El periodismo deportivo y las TICS: la titulación y la bajada de la noticia en el tratamiento de la información periodística
En mi Beca EVC-CIN 2016 se analizó el rol de la imagen en la construcción de la noticia deportiva. Durante el proceso de investigación, apareció un nuevo interrogante: ¿qué pasa con el título y la bajada de las noticias? Es decir, analizar el rol de la imagen quedaba escueto e incompleto si este no se hacía en conjunto con un componente de real preponderancia, la titulación. Es por esto que la propuesta de este trabajo fue aportar una dimensión de análisis que permita comprender de forma integral como intervienen en la construcción de la noticia estos componentes en este contexto de auge de las nuevas tecnologías.Facultad de Periodismo y Comunicación Socia
El periodismo deportivo y las TICS: la titulación y la bajada de la noticia en el tratamiento de la información periodística
En mi Beca EVC-CIN 2016 se analizó el rol de la imagen en la construcción de la noticia deportiva. Durante el proceso de investigación, apareció un nuevo interrogante: ¿qué pasa con el título y la bajada de las noticias? Es decir, analizar el rol de la imagen quedaba escueto e incompleto si este no se hacía en conjunto con un componente de real preponderancia, la titulación. Es por esto que la propuesta de este trabajo fue aportar una dimensión de análisis que permita comprender de forma integral como intervienen en la construcción de la noticia estos componentes en este contexto de auge de las nuevas tecnologías.Facultad de Periodismo y Comunicación Socia
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