Electron Microscopy Structural Insights into CPAP Oligomeric Behavior:A Plausible Assembly Process of a Supramolecular Scaffold of the Centrosome

Centrosomal P4.1-associated protein (CPAP) is a cell cycle regulated protein fundamental for centrosome assembly and centriole elongation. In humans, the region between residues 897–1338 of CPAP mediates interactions with other proteins and includes a homodimerization domain. CPAP mutations cause primary autosomal recessive microcephaly and Seckel syndrome. Despite of the biological/clinical relevance of CPAP, its mechanistic behavior remains unclear and its C-terminus (the G-box/TCP domain) is the only part whose structure has been solved. This situation is perhaps due in part to the challenges that represent obtaining the protein in a soluble, homogeneous state for structural studies. Our work constitutes a systematic structural analysis on multiple oligomers of HsCPAP897−1338, using single-particle electron microscopy (EM) of negatively stained (NS) samples. Based on image classification into clearly different regular 3D maps (putatively corresponding to dimers and tetramers) and direct observation of individual images representing other complexes of HsCPAP897−1338 (i.e., putative flexible monomers and higher-order multimers), we report a dynamic oligomeric behavior of this protein, where different homo-oligomers coexist in variable proportions. We propose that dimerization of the putative homodimer forms a putative tetramer which could be the structural unit for the scaffold that either tethers the pericentriolar material to centrioles or promotes procentriole elongation. A coarse fitting of atomic models into the NS 3D maps at resolutions around 20 Å is performed only to complement our experimental data, allowing us to hypothesize on the oligomeric composition of the different complexes. In this way, the current EM work represents an initial step toward the structural characterization of different oligomers of CPAP, suggesting further insights to understand how this protein works, contributing to the elucidation of control mechanisms for centriole biogenesis.This work was supported by the Comunidad de Madrid through grant CAM (S2010/BMD- 2305) and the Spanish Ministry of Economy and Competitiveness through Grants AIC-A-2011-0638 and BIO2013-44647-R.Peer reviewedPeer Reviewe

The ALHAMBRA survey: evolution of galaxy spectral segregation

We study the clustering of galaxies as a function of spectral type and redshift in the range $0.35 < z < 1.1$ using data from the Advanced Large Homogeneous Area Medium Band Redshift Astronomical (ALHAMBRA) survey. The data cover 2.381 deg$^2$ in 7 fields, after applying a detailed angular selection mask, with accurate photometric redshifts [$\sigma_z < 0.014(1+z)$] down to $I_{AB} < 24$. From this catalog we draw five fixed number density, redshift-limited bins. We estimate the clustering evolution for two different spectral populations selected using the ALHAMBRA-based photometric templates: quiescent and star-forming galaxies. For each sample, we measure the real-space clustering using the projected correlation function. Our calculations are performed over the range $[0.03,10.0] h^{-1}$ Mpc, allowing us to find a steeper trend for $r_p \lesssim 0.2 h^{-1}$ Mpc, which is especially clear for star-forming galaxies. Our analysis also shows a clear early differentiation in the clustering properties of both populations: star-forming galaxies show weaker clustering with evolution in the correlation length over the analysed redshift range, while quiescent galaxies show stronger clustering already at high redshifts, and no appreciable evolution. We also perform the bias calculation where similar segregation is found, but now it is among the quiescent galaxies where a growing evolution with redshift is clearer. These findings clearly corroborate the well known colour-density relation, confirming that quiescent galaxies are mainly located in dark matter halos that are more massive than those typically populated by star-forming galaxies.Comment: 14 pages, 9 figures, accepted by Ap

The ALHAMBRA survey : Estimation of the clustering signal encoded in the cosmic variance

The relative cosmic variance ($\sigma_v$) is a fundamental source of uncertainty in pencil-beam surveys and, as a particular case of count-in-cell statistics, can be used to estimate the bias between galaxies and their underlying dark-matter distribution. Our goal is to test the significance of the clustering information encoded in the $\sigma_v$ measured in the ALHAMBRA survey. We measure the cosmic variance of several galaxy populations selected with $B-$band luminosity at $0.35 \leq z < 1.05$ as the intrinsic dispersion in the number density distribution derived from the 48 ALHAMBRA subfields. We compare the observational $\sigma_v$ with the cosmic variance of the dark matter expected from the theory, $\sigma_{v,{\rm dm}}$. This provides an estimation of the galaxy bias $b$. The galaxy bias from the cosmic variance is in excellent agreement with the bias estimated by two-point correlation function analysis in ALHAMBRA. This holds for different redshift bins, for red and blue subsamples, and for several $B-$band luminosity selections. We find that $b$ increases with the $B-$band luminosity and the redshift, as expected from previous work. Moreover, red galaxies have a larger bias than blue galaxies, with a relative bias of $b_{\rm rel} = 1.4 \pm 0.2$. Our results demonstrate that the cosmic variance measured in ALHAMBRA is due to the clustering of galaxies and can be used to characterise the $\sigma_v$ affecting pencil-beam surveys. In addition, it can also be used to estimate the galaxy bias $b$ from a method independent of correlation functions.Comment: Astronomy and Astrophysics, in press. 9 pages, 4 figures, 3 table

The ALHAMBRA survey : B−B-band luminosity function of quiescent and star-forming galaxies at 0.2≤z<10.2 \leq z < 1 by PDF analysis

Our goal is to study the evolution of the $B-$band luminosity function (LF) since $z=1$ using ALHAMBRA data. We used the photometric redshift and the $I-$band selection magnitude probability distribution functions (PDFs) of those ALHAMBRA galaxies with $I\leq24$ mag to compute the posterior LF. We statistically studied quiescent and star-forming galaxies using the template information encoded in the PDFs. The LF covariance matrix in redshift-magnitude-galaxy type space was computed, including the cosmic variance. That was estimated from the intrinsic dispersion of the LF measurements in the 48 ALHAMBRA sub-fields. The uncertainty due to the photometric redshift prior is also included in our analysis. We modelled the LF with a redshift-dependent Schechter function affected by the same selection effects than the data. The measured ALHAMBRA LF at $0.2\leq z<1$ and the evolving Schechter parameters both for quiescent and star-forming galaxies agree with previous results in the literature. The estimated redshift evolution of $M_B^* \propto Qz$ is $Q_{\rm SF}=-1.03\pm0.08$ and $Q_{\rm Q}=-0.80\pm0.08$, and of $\log \phi^* \propto Pz$ is $P_{\rm SF}=-0.01\pm0.03$ and $P_{\rm Q}=-0.41\pm0.05$. The measured faint-end slopes are $\alpha_{\rm SF}=-1.29\pm0.02$ and $\alpha_{\rm Q}=-0.53\pm0.04$. We find a significant population of faint quiescent galaxies, modelled by a second Schechter function with slope $\beta=-1.31\pm0.11$. We find a factor $2.55\pm0.14$ decrease in the luminosity density $j_B$ of star-forming galaxies, and a factor $1.25\pm0.16$ increase in the $j_B$ of quiescent ones since $z=1$, confirming the continuous build-up of the quiescent population with cosmic time. The contribution of the faint quiescent population to $j_B$ increases from 3% at $z=1$ to 6% at $z=0$. The developed methodology will be applied to future multi-filter surveys such as J-PAS.Comment: Accepted for publication in Astronomy and Astrophysics. 25 pages, 20 figures, 7 table

Dragon-kings: mechanisms, statistical methods and empirical evidence

This introductory article presents the special Discussion and Debate volume "From black swans to dragon-kings, is there life beyond power laws?" published in Eur. Phys. J. Special Topics in May 2012. We summarize and put in perspective the contributions into three main themes: (i) mechanisms for dragon-kings, (ii) detection of dragon-kings and statistical tests and (iii) empirical evidence in a large variety of natural and social systems. Overall, we are pleased to witness significant advances both in the introduction and clarification of underlying mechanisms and in the development of novel efficient tests that demonstrate clear evidence for the presence of dragon-kings in many systems. However, this positive view should be balanced by the fact that this remains a very delicate and difficult field, if only due to the scarcity of data as well as the extraordinary important implications with respect to hazard assessment, risk control and predictability.Comment: 20 page

Indication for the disappearance of reactor electron antineutrinos in the Double Chooz experiment

The Double Chooz Experiment presents an indication of reactor electron antineutrino disappearance consistent with neutrino oscillations. A ratio of 0.944 $\pm$ 0.016 (stat) $\pm$ 0.040 (syst) observed to predicted events was obtained in 101 days of running at the Chooz Nuclear Power Plant in France, with two 4.25 GW$_{th}$ reactors. The results were obtained from a single 10 m$^3$ fiducial volume detector located 1050 m from the two reactor cores. The reactor antineutrino flux prediction used the Bugey4 measurement as an anchor point. The deficit can be interpreted as an indication of a non-zero value of the still unmeasured neutrino mixing parameter \sang. Analyzing both the rate of the prompt positrons and their energy spectrum we find \sang = 0.086 $\pm$ 0.041 (stat) $\pm$ 0.030 (syst), or, at 90% CL, 0.015 $<$ \sang $\ <$ 0.16.Comment: 7 pages, 4 figures, (new version after PRL referee's comments

A Ks-band-selected catalogue of objects in the ALHAMBRA survey

The original ALHAMBRA catalogue contained over 400,000 galaxies selected using a synthetic F814W image, to the magnitude limit AB(F814W)$\approx$24.5. Given the photometric redshift depth of the ALHAMBRA multiband data (=0.86) and the approximately $I$-band selection, there is a noticeable bias against red objects at moderate redshift. We avoid this bias by creating a new catalogue selected in the $K_s$ band. This newly obtained catalogue is certainly shallower in terms of apparent magnitude, but deeper in terms of redshift, with a significant population of red objects at $z>1$. We select objects using the $K_s$ band images, which reach an approximate AB magnitude limit $K_s \approx 22$. We generate masks and derive completeness functions to characterize the sample. We have tested the quality of the photometry and photometric redshifts using both internal and external checks. Our final catalogue includes $\approx 95,000$ sources down to $K_s \approx 22$, with a significant tail towards high redshift. We have checked that there is a large sample of objects with spectral energy distributions that correspond to that of massive, passively evolving galaxies at $z > 1$, reaching as far as $z \approx 2.5$. We have tested the possibility of combining our data with deep infrared observations at longer wavelengths, particularly Spitzer IRAC data

The ALHAMBRA survey: evolution of galaxy clustering since z ~ 1

We study the clustering of galaxies as function of luminosity and redshift in the range 0.35 < z < 1.25 using data from the Advanced Large Homogeneous Area Medium-Band Redshift Astronomical (ALHAMBRA) survey. The ALHAMBRA data used in this work cover 2.38 deg2 in seven independent fields, after applying a detailed angular selection mask, with accurate photometric redshifts, σz ≲ 0.014(1 + z), down to IAB < 24. Given the depth of the survey, we select samples in B-band luminosity down to Lth ≃ 0.16L* at z = 0.9. We measure the real-space clustering using the projected correlation function, accounting for photometric redshifts uncertainties. We infer the galaxy bias, and study its evolution with luminosity. We study the effect of sample variance, and confirm earlier results that the Cosmic Evolution Survey (COSMOS) and European Large Area ISO Survey North 1 (ELAIS-N1) fields are dominated by the presence of large structures. For the intermediate and bright samples, Lmed ≳ 0.6L*, we obtain a strong dependence of bias on luminosity, in agreement with previous results at similar redshift. We are able to extend this study to fainter luminosities, where we obtain an almost flat relation, similar to that observed at low redshift. Regarding the evolution of bias with redshift, our results suggest that the different galaxy populations studied reside in haloes covering a range in mass between log10[Mh/( h−1 M⊙)] ≳ 11.5 for samples with Lmed ≃ 0.3L* and log10[Mh/( h−1 M⊙)] ≳ 13.0 for samples with Lmed ≃ 2L*, with typical occupation numbers in the range of ∼1–3 galaxies per halo

Reproductive medicine in northwest Argentina: traditional and institutional systems

<p>Abstract</p> <p>Background</p> <p>The state of conservation of the traditional cultures of Northwest Argentina is variable and somewhat problematic but to a lesser or a greater extent all the peoples are related to an hegemonic culture. We present a case study carried out in the rural communities of the Yungas biome (Salta) where the extent of isolation varies as does the type of access to public health services. The use of medicinal plants in the area is ordinary and widely spread.</p> <p>Methods</p> <p>The data can be organized in two categories, as medical systems public records (for the regional hospital at Los Toldos), and as ethnobotanical sets. A total of 59 surveys to 40 interviewees were undertaken using a semi structured questionnaire. We present an analysis of the relative importance of the medicinal herbs used in reproductive medicine considering the plants used in the traditional medical system and the factors that can affect the relationship between formal medicine and patients. We further analized how the degree of accessibility to the local hospital influences the diversity of use of plant species used to assist deliveries and to decrease infant mortality in children minor than one year of age.</p> <p>Results</p> <p>In reproductive medicine, 13 ailments and/or different physiological states are locally identified and treated. Local population uses 108 ethnospecies for this kind of illnesses. According to the local conception the hot/cold imbalance could be the principal cause for reproductive illnesses; pregnancy may have natural or supernatural origin, post partum and menstruation involve similar sanitary risks, and neonatal care has a strong magic connotation. In relation with the formal medicine, the more accessible is the health center the more women assist to it. We have not found a relation between accessibility and infant mortality.</p> <p>Conclusion</p> <p>In the local reproductive medicine, most of the practices are concerned with the hot/cold balance. According to their importance the factors involved are: the family medicine, the midwife, and the formal doctors. Plants have an important role; however there is a lack of total agreement among the families who use them. Reluctance to institutional deliveries may be due to the weak relationship between patients and doctors, and the lack of logistic assistance to delivering mothers coming from far away locations.</p

Search for composite and exotic fermions at LEP 2

A search for unstable heavy fermions with the DELPHI detector at LEP is reported. Sequential and non-canonical leptons, as well as excited leptons and quarks, are considered. The data analysed correspond to an integrated luminosity of about 48 pb^{-1} at an e^+e^- centre-of-mass energy of 183 GeV and about 20 pb^{-1} equally shared between the centre-of-mass energies of 172 GeV and 161 GeV. The search for pair-produced new leptons establishes 95% confidence level mass limits in the region between 70 GeV/c^2 and 90 GeV/c^2, depending on the channel. The search for singly produced excited leptons and quarks establishes upper limits on the ratio of the coupling of the excited fermio