Soliton Molecules and Multisoliton States in Ultrafast Fibre Lasers: Intrinsic Complexes in Dissipative Systems

Benefiting from ultrafast temporal resolution, broadband spectral bandwidth, as well as high peak power, passively mode-locked fibre lasers have attracted growing interest and exhibited great potential from fundamental sciences to industrial and military applications. As a nonlinear system containing complex interactions from gain, loss, nonlinearity, dispersion, etc., ultrafast fibre lasers deliver not only conventional single soliton but also soliton bunching with different types. In analogy to molecules consisting of several atoms in chemistry, soliton molecules (in other words, bound solitons) in fibre lasers are of vital importance for in-depth understanding of the nonlinear interaction mechanism and further exploration for high-capacity fibre-optic communications. In this Review, we summarize the state-of-the-art advances on soliton molecules in ultrafast fibre lasers. A variety of soliton molecules with different numbers of soliton, phase-differences and pulse separations were experimentally observed owing to the flexibility of parameters such as mode-locking techniques and dispersion control. Numerical simulations clearly unravel how different nonlinear interactions contribute to formation of soliton molecules. Analysis of the stability and the underlying physical mechanisms of bound solitons bring important insights to this field. For a complete view of nonlinear optical phenomena in fibre lasers, other dissipative states such as vibrating soliton pairs, soliton rains, rogue waves and coexisting dissipative solitons are also discussed. With development of advanced real-time detection techniques, the internal motion of different pulsing states is anticipated to be characterized, rendering fibre lasers a versatile platform for nonlinear complex dynamics and various practical applications

Soliton Molecules and Multisoliton States in Ultrafast Fibre Lasers: Intrinsic Complexes in Dissipative Systems

Benefiting from ultrafast temporal resolution, broadband spectral bandwidth, as well as high peak power, passively mode-locked fibre lasers have attracted growing interest and exhibited great potential from fundamental sciences to industrial and military applications. As a nonlinear system containing complex interactions from gain, loss, nonlinearity, dispersion, etc., ultrafast fibre lasers deliver not only conventional single soliton but also soliton bunching with different types. In analogy to molecules consisting of several atoms in chemistry, soliton molecules (in other words, bound solitons) in fibre lasers are of vital importance for in-depth understanding of the nonlinear interaction mechanism and further exploration for high-capacity fibre-optic communications. In this Review, we summarize the state-of-the-art advances on soliton molecules in ultrafast fibre lasers. A variety of soliton molecules with different numbers of soliton, phase-differences and pulse separations were experimentally observed owing to the flexibility of parameters such as mode-locking techniques and dispersion control. Numerical simulations clearly unravel how different nonlinear interactions contribute to formation of soliton molecules. Analysis of the stability and the underlying physical mechanisms of bound solitons bring important insights to this field. For a complete view of nonlinear optical phenomena in fibre lasers, other dissipative states such as vibrating soliton pairs, soliton rains, rogue waves and coexisting dissipative solitons are also discussed. With development of advanced real-time detection techniques, the internal motion of different pulsing states is anticipated to be characterized, rendering fibre lasers a versatile platform for nonlinear complex dynamics and various practical applications

XTH31, Encoding an in Vitro XEH/XET-Active Enzyme, Regulates Aluminum Sensitivity by Modulating in Vivo XET Action, Cell Wall Xyloglucan Content, and Aluminum Binding Capacity in Arabidopsis

Xyloglucan endohydrolase (XEH) and xyloglucan endotransglucosylase (XET) activities, encoded by xyloglucan endotransglucosylase-hydrolase (XTH) genes, are involved in cell wall extension by cutting or cutting and rejoining xyloglucan chains, respectively. However, the physiological significance of this biochemical activity remains incompletely understood. Here, we find that an XTH31 T-DNA insertion mutant, xth31, is more Al resistant than the wild type. XTH31 is bound to the plasma membrane and the encoding gene is expressed in the root elongation zone and in nascent leaves, suggesting a role in cell expansion. XTH31 transcript accumulation is strongly downregulated by Al treatment. XTH31 expression in yeast yields a protein with an in vitro XEH:XET activity ratio of >5000:1. xth31 accumulates significantly less Al in the root apex and cell wall, shows remarkably lower in vivo XET action and extractable XET activity, has a lower xyloglucan content, and exhibits slower elongation. An exogenous supply of xyloglucan significantly ameliorates Al toxicity by reducing Al accumulation in the roots, owing to the formation of an Al-xyloglucan complex in the medium, as verified by an obvious change in chemical shift of (27)Al-NMR. Taken together, the data indicate that XTH31 affects Al sensitivity by modulating cell wall xyloglucan content and Al binding capacity

Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander (Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia

Background Climate oscillation may have a profound effect on species distributions, gene flow patterns and population demography. In response to environmental change, those species restricted to montane habitats experienced expansions and contractions along elevation gradients, which can drive differentiation among sky islands. Results The Shangcheng stout salamander (Pachyhynobius shangchengensis) is a cool stream amphibian restricted to high-elevation areas in the Dabie Mountains, East China. In the present study, we used mtDNA genes (Cyt b and ND2) of 193 individuals and 12 nuclear microsatellite loci genotyped on 370 individuals, representing 6 populations (JTX, KHJ, MW, TTZ, BYM and KJY) across the taxon’s distribution area, to investigate their genetic variation and evolutionary history of P. shangchengensis. Most populations showed unusually high levels of genetic diversity. Phylogenetic analyses revealed five monophyletic clades with divergence times ranging from 3.96 to 1.4 Mya. Accordingly, significant genetic differentiation was present between these populations. Bayesian skyline plot analyses provided that all populations underwent long-term population expansions since the last inter-glacial (0.13 Mya ~ 0.12 Mya). Msvar analyses found recent signals of population decline for two northern populations (JTX and KHJ) reflecting a strong bottleneck (approximately 15-fold decrease) during the mid-Holocene (about 6000 years ago). Ecological niche modelling has shown a discontinuity in suitable habitats for P. shangchengensis under different historical climatic conditions. Conclusions Our results suggest that the niche conservatism of P. shangchengensis and sky island effects may have led to long-term isolation between populations. In sky island refuges, the mid-latitude Dabie Mountains have provided a long-term stable environment for P. shangchengensis, which has led to the accumulation of genetic diversity and has promoted genetic divergence

Tick-borne Agents in Rodents, China, 2004–2006

Many rodent species may be involved in the enzootic maintenance of these agents

Effects of Tillage and Nitrogen Fertilizers on CH4 and CO2 Emissions and Soil Organic Carbon in Paddy Fields of Central China

Quantifying carbon (C) sequestration in paddy soils is necessary to help better understand the effect of agricultural practices on the C cycle. The objective of the present study was to assess the effects of tillage practices [conventional tillage (CT) and no-tillage (NT)] and the application of nitrogen (N) fertilizer (0 and 210 kg N ha−1) on fluxes of CH4 and CO2, and soil organic C (SOC) sequestration during the 2009 and 2010 rice growing seasons in central China. Application of N fertilizer significantly increased CH4 emissions by 13%–66% and SOC by 21%–94% irrespective of soil sampling depths, but had no effect on CO2 emissions in either year. Tillage significantly affected CH4 and CO2 emissions, where NT significantly decreased CH4 emissions by 10%–36% but increased CO2 emissions by 22%–40% in both years. The effects of tillage on the SOC varied with the depth of soil sampling. NT significantly increased the SOC by 7%–48% in the 0–5 cm layer compared with CT. However, there was no significant difference in the SOC between NT and CT across the entire 0–20 cm layer. Hence, our results suggest that the potential of SOC sequestration in NT paddy fields may be overestimated in central China if only surface soil samples are considered

Synthetic strategies to nanostructured photocatalysts for CO2 reduction to solar fuels and chemicals

Artificial photosynthesis represents one of the great scientific challenges of the 21st century, offering the possibility of clean energy through water photolysis and renewable chemicals through CO2 utilisation as a sustainable feedstock. Catalysis will undoubtedly play a key role in delivering technologies able to meet these goals, mediating solar energy via excited generate charge carriers to selectively activate molecular bonds under ambient conditions. This review describes recent synthetic approaches adopted to engineer nanostructured photocatalytic materials for efficient light harnessing, charge separation and the photoreduction of CO2 to higher hydrocarbons such as methane, methanol and even olefins

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead