711 research outputs found
East-West Paths to Unconventional Computing
Unconventional computing is about breaking boundaries in thinking, acting and computing. Typical topics of this non-typical field include, but are not limited to physics of computation, non-classical logics, new complexity measures, novel hardware, mechanical, chemical and quantum computing. Unconventional computing encourages a new style of thinking while practical applications are obtained from uncovering and exploiting principles and mechanisms of information processing in and functional properties of, physical, chemical and living systems; in particular, efficient algorithms are developed, (almost) optimal architectures are designed and working prototypes of future computing devices are manufactured. This article includes idiosyncratic accounts of âunconventional computingâ scientists reflecting on their personal experiences, what attracted them to the field, their inspirations and discoveries.info:eu-repo/semantics/publishedVersio
Physics of Transport and Traffic Phenomena in Biology: from molecular motors and cells to organisms
Traffic-like collective movements are observed at almost all levels of
biological systems. Molecular motor proteins like, for example, kinesin and
dynein, which are the vehicles of almost all intra-cellular transport in
eukayotic cells, sometimes encounter traffic jam that manifests as a disease of
the organism. Similarly, traffic jam of collagenase MMP-1, which moves on the
collagen fibrils of the extracellular matrix of vertebrates, has also been
observed in recent experiments. Traffic-like movements of social insects like
ants and termites on trails are, perhaps, more familiar in our everyday life.
Experimental, theoretical and computational investigations in the last few
years have led to a deeper understanding of the generic or common physical
principles involved in these phenomena. In particular, some of the methods of
non-equilibrium statistical mechanics, pioneered almost a hundred years ago by
Einstein, Langevin and others, turned out to be powerful theoretical tools for
quantitaive analysis of models of these traffic-like collective phenomena as
these systems are intrinsically far from equilibrium. In this review we
critically examine the current status of our understanding, expose the
limitations of the existing methods, mention open challenging questions and
speculate on the possible future directions of research in this
interdisciplinary area where physics meets not only chemistry and biology but
also (nano-)technology.Comment: 33 page Review article, REVTEX text, 29 EPS and PS figure
Towards experimental P-systems using multivesicular liposomes
P-systems are abstract computational models inspired by the phospholipid bilayer membranes generated by biological cells. Illustrated here is a mechanism by which recursive liposome structures (multivesicular liposomes) may be experimentally produced through electroformation of dipalmitoylphosphatidylcholine (DOPC) films for use in ârealâ P-systems. We first present the electroformation protocol and microscopic characterisation of incident liposomes towards estimating the size of computing elements, level of internal compartment recursion, fault tolerance and stability. Following, we demonstrate multiple routes towards embedding symbols, namely modification of swelling solutions, passive diffusion and microinjection. Finally, we discuss how computing devices based on P-systems can be produced and their current limitations
Cellular Automaton Belousov-Zhabotinsky Model for Binary Full Adder
© 2017 World Scientific Publishing Company. The continuous increment in the performance of classical computers has been driven to its limit. New ways are studied to avoid this oncoming bottleneck and many answers can be found. An example is the Belousov-Zhabotinsky (BZ) reaction which includes some fundamental and essential characteristics that attract chemists, biologists, and computer scientists. Interaction of excitation wave-fronts in BZ system, can be interpreted in terms of logical gates and applied in the design of unconventional hardware components. Logic gates and other more complicated components have been already proposed using different topologies and particular characteristics. In this study, the inherent parallelism and simplicity of Cellular Automata (CAs) modeling is combined with an Oregonator model of light-sensitive version of BZ reaction. The resulting parallel and computationally-inexpensive model has the ability to simulate a topology that can be considered as a one-bit full adder digital component towards the design of an Arithmetic Logic Unit (ALU)
A Survey on Continuous Time Computations
We provide an overview of theories of continuous time computation. These
theories allow us to understand both the hardness of questions related to
continuous time dynamical systems and the computational power of continuous
time analog models. We survey the existing models, summarizing results, and
point to relevant references in the literature
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