553 research outputs found
Saturn S-IB Stage assembly and test report, S-IB-1
Manufacture, assembly, and static tests of Saturn S-IB-1 stag
Using exomarkers to assess mitochondrial reactive species in vivo
Background:
The ability to measure the concentrations of small damaging and signalling molecules such as reactive oxygen species (ROS) in vivo is essential to understanding their biological roles. While a range of methods can be applied to in vitro systems, measuring the levels and relative changes in reactive species in vivo is challenging.
Scope of review:
One approach towards achieving this goal is the use of exomarkers. In this, exogenous probe compounds are administered to the intact organism and are then transformed by the reactive molecules in vivo to produce a diagnostic exomarker. The exomarker and the precursor probe can be analysed ex vivo to infer the identity and amounts of the reactive species present in vivo. This is akin to the measurement of biomarkers produced by the interaction of reactive species with endogenous biomolecules.
Major conclusions and general significance:
Our laboratories have developed mitochondria-targeted probes that generate exomarkers that can be analysed ex vivo by mass spectrometry to assess levels of reactive species within mitochondria in vivo. We have used one of these compounds, MitoB, to infer the levels of mitochondrial hydrogen peroxide within flies and mice. Here we describe the development of MitoB and expand on this example to discuss how better probes and exomarkers can be developed. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.
Abbreviations:
EPR, electron paramagnetic resonance; GFP, green fluorescent protein; 4-HNE, 4-hydroxynonenal; MitoB, 3-(dihydroxyboronyl)benzyltriphenylphosphonium bromide; MitoP, (3-hydroxybenzyl)triphenylphosphonium bromide; ROS, reactive oxygen species; SOD, superoxide dismutase; TPMP, methyltriphenylphosphonium; TPP, triphenylphosphonium catio
Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway.
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Previous issue date: 2017-02-0
Selective Uncoupling of Individual Mitochondria within a Cell Using a Mitochondria-Targeted Photoactivated Protonophore
Depolarization of an individual mitochondrion or small clusters of mitochondria within cells has been achieved using a photoactivatable probe. The probe is targeted to the matrix of the mitochondrion by an alkyltriphenylphosphonium lipophilic cation and releases the protonophore 2,4-dinitrophenol locally in predetermined regions in response to directed irradiation with UV light via a local photolysis system. This also provides a proof of principle for the general temporally and spatially controlled release of bioactive molecules, pharmacophores, or toxins to mitochondria with tissue, cell, or mitochondrion specificity
Form Factors in the radiative pion decay
We perform an analysis of the form factors that rule the structure-dependent
amplitude in the radiative pion decay. The resonance contributions to pion -> e
nu_e gamma decays are computed through the proper construction of the vector
and axial-vector form factors by setting the QCD driven asymptotic properties
of the three-point Green functions VVP and VAP, and by demanding the smoothing
of the form factors at high transfer of momentum. A comparison between
theoretical and experimental determinations of the form factors is also carried
out. We also consider and evaluate the role played by a non-standard tensor
form factor. We conclude that, at present and due to the hadronic incertitudes,
the search for New Physics in this process is not feasible.Comment: 14 pages, no figures. Typos corrected. Accepted for publication in
The European Physical Journal
Use Of The BigSol Time Of Flight Spectrometer In The Study Of Superheavy Element Production
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/98691/1/APC000594.pd
Experimental search for super and hyper heavy nuclei at cyclotron Institute Texas A&M University
The question "How heavy can an atomic nucleus be?" is a fundamental problem in nuclear physics. The possible existence of island(s) of stable super-heavy nuclei has been an inspiring problem in heavy ion physics for almost four decades. This paper is focused on the experimental search of Super/Hyper Heavy Elements (SHE/HHE) conducted at the Cyclotron Institute, Texas A&M University. A novel experimental idea and experimental set up introduced for this research will be presented
Detection of interstellar oxidaniumyl: abundant H2O+ towards the star-forming regions DR21, Sgr B2, and NGC6334
We identify a prominent absorption feature at 1115 GHz, detected in first
HIFI spectra towards high-mass star-forming regions, and interpret its
astrophysical origin. The characteristic hyperfine pattern of the H2O+
ground-state rotational transition, and the lack of other known low-energy
transitions in this frequency range, identifies the feature as H2O+ absorption
against the dust continuum background and allows us to derive the velocity
profile of the absorbing gas. By comparing this velocity profile with velocity
profiles of other tracers in the DR21 star-forming region, we constrain the
frequency of the transition and the conditions for its formation. In DR21, the
velocity distribution of H2O+ matches that of the [CII] line at 158\mu\m and of
OH cm-wave absorption, both stemming from the hot and dense clump surfaces
facing the HII-region and dynamically affected by the blister outflow. Diffuse
foreground gas dominates the absorption towards Sgr B2. The integrated
intensity of the absorption line allows us to derive lower limits to the H2O+
column density of 7.2e12 cm^-2 in NGC 6334, 2.3e13 cm^-2 in DR21, and 1.1e15
cm^-2 in Sgr B2.Comment: Accepted for publication in A&
UBF levels determine the number of active ribosomal RNA genes in mammals
In mammals, the mechanisms regulating the number of active copies of the âŒ200 ribosomal RNA (rRNA) genes transcribed by RNA polymerase I are unclear. We demonstrate that depletion of the transcription factor upstream binding factor (UBF) leads to the stable and reversible methylation-independent silencing of rRNA genes by promoting histone H1âinduced assembly of transcriptionally inactive chromatin. Chromatin remodeling is abrogated by the mutation of an extracellular signal-regulated kinase site within the high mobility group box 1 domain of UBF1, which is required for its ability to bend and loop DNA in vitro. Surprisingly, rRNA gene silencing does not reduce net rRNA synthesis as transcription from remaining active genes is increased. We also show that the active rRNA gene pool is not static but decreases during differentiation, correlating with diminished UBF expression. Thus, UBF1 levels regulate active rRNA gene chromatin during growth and differentiation
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