12 research outputs found

    Nucleoporin Mediated Nuclear Positioning and Silencing of HMR

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    The organization of chromatin domains in the nucleus is an important factor in gene regulation. In eukaryotic nuclei, transcriptionally silenced chromatin clusters at the nuclear periphery while transcriptionally poised chromatin resides in the nuclear interior. Recent studies suggest that nuclear pore proteins (NUPs) recruit loci to nuclear pores to aid in insulation of genes from silencing and during gene activation. We investigated the role of NUPs at a native yeast insulator and show that while NUPs localize to the native tDNA insulator adjacent to the silenced HMR domain, loss of pore proteins does not compromise insulation. Surprisingly we find that NUPs contribute to silencing at HMR and are able to restore silencing to a silencing-defective HMR allele when tethered to the locus. We show that the perinuclear positioning of heterochromatin is important for the NUP-mediated silencing effect and find that loss of NUPs result in decreased localization of HMR to the nuclear periphery. We also show that loss of telomeric tethering pathways does not eliminate NUP localization to HMR, suggesting that NUPs may mediate an independent pathway for HMR association with the nuclear periphery. We propose that localization of NUPs to the tDNA insulator at HMR helps maintain the intranuclear position of the silent locus, which in turn contributes to the fidelity of silencing at HMR

    Transcriptional Regulation Of Subcerebral Cortical Projection Neurons At Multiple Steps Of Mammalian Cortical Development

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    The highly complex and specialized functions of the mammalian cortex rely on precise temporal development and organization of the diverse neuronal cell types found within by multiple cellular processes. A complete understanding of the molecular mechanisms regulating these events remains elusive. Given that many genes and cellular processes are conserved from mouse to human, I utilize the mammalian cerebral cortex in Mus musculus, as a model system for studying cortical development. Here, I present results from a detailed characterization of the transcription factor Myocyte Enhancing Factor 2C (Mef2c) during postnatal mouse cortical development. Mef2c, considered an upper layer gene, is expressed in all 6 layers of the cerebral cortex including a subpopulation of corticofugal projection neurons. Given its expression pattern in the cortex and previously identified functions in myocyte and CNS development, we hypothesized that Mef2c was a key regulator of neocortical development. Cell type specific and temporal expression analysis revealed that MEF2C is expressed in subcerebral projection neurons throughout corticogenesis. Using a conditional loss-of-function approach, we compared cortical development of control (Mef2ccontrol) and conditional knock out (Mef2ccKO) mice to identify the role of Mef2c. Results revealed that MEF2C expression pattern is similar to that of SATB2 and is in part positively regulated by Satb2. We showed that MEF2C is expressed in subcerebral neurons and is partially required to promote and maintain the identity of these neurons into early postnatal ages. Furthermore, we showed that MEF2C is required for axonal outgrowth of subcerebral projection neurons, such that Mef2ccKO brains displayed a significant loss of axon projections to subcerebral targets compared to Mef2ccontrol. Additionally, callosal neuron distribution analysis suggested that MEF2C acts to inhibit a callosal cell identity in deep layer neurons. Together, these data indicate the broad yet critical roles for Mef2c during the organization and development of the mouse cerebral cortex

    Synthesis of a 2-aryl-3-aroyl indole salt (OXi8007) resembling combretastatin A-4 with application as a vascular disrupting agent

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    The natural products colchicine and combretastatin A-4 are potent inhibitors of tubulin assembly, and they have inspired the design and synthesis of a large number of small-molecule, potential anticancer agents. The indole-based molecular scaffold is prominent among these SAR modifications, leading to a rapidly increasing number of agents. The water-soluble phosphate prodrug 33 (OXi8007) of 2-aryl-3-aroylindole-based phenol 8 (OXi8006) was prepared by chemical synthesis and found to be strongly cytotoxic against selected human cancer cell lines (GI50 = 36 nM against DU-145 cells, for example). The free phenol, 8 (OXi8006), was a strong inhibitor (IC 50 = 1.1 ΞΌM) of tubulin assembly. The corresponding phosphate prodrug 33 (OXi8007) also demonstrated pronounced interference with tumor vasculature in a preliminary in vivo study utilizing a SCID mouse model bearing an orthotopic PC-3 (prostate) tumor as imaged by color Doppler ultrasound. The combination of these results provides evidence that the indole-based phosphate prodrug 33 (OXi8007) functions as a vascular disrupting agent that may prove useful for the treatment of cancer. Β© 2013 The American Chemical Society and American Society of Pharmacognosy

    Chemoradiation therapy alters the PD-L1 score in locoregional recurrent squamous cell carcinomas of the head and neck.

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    PD-L1 testing guides therapeutic decision-making for head and neck squamous cell carcinoma (HNSCC). We sought to understand whether chemoradiation therapy (CRT) influences the PD-L1 combined positive score (CPS) and other biomarkers of response to immunotherapy. PD-L1 expression was assessed using immunohistochemistry, and bulk RNA sequencing was performed on 146 HNSCC patients (65 primary sites, 50 paired local recurrences, and 31 paired regional recurrences). PD-L1 was scored using the CPS of β‰₯1, β‰₯20, and β‰₯50. Overall, 98 %, 54 %, and 17 % of HNSCCs had a CPS β‰₯1, β‰₯20, and β‰₯50, respectively. When using a cut-off of β‰₯1, CRT did not significantly change CPS at the locoregional recurrent site. However, there were significant changes when using CPS β‰₯20 or β‰₯50. The CPS changed for 32 % of patients when using a CPS β‰₯20 (p \u3c 0.001). When using a CPS β‰₯50, there was a 20-23 % (p = 0.0058-0.00067) discordance rate at the site of locoregional recurrence. Oral cavity cancers had a significantly higher discordant rate than other primary sites for CPS β‰₯50, 44 % (8/18, p = 0.0058) and 58 % (7/12, p = 0.00067) discordance at the site of local and regional recurrence, respectively. When evaluating the 18 gene IFN-Ι£ signature predictive of response to anti-PD-1 blockade, there was a statistically significant increase in the IFN-Ι£ signature in recurrent larynx cancer (p = 0.02). Our study demonstrates that when using a higher cut-off of CPS β‰₯20 and β‰₯50, a repeat biopsy may be warranted after CRT for local and regional recurrent HNSCCs

    An anti-PD-1-GITR-L bispecific agonist induces GITR clustering-mediated T cell activation for cancer immunotherapy.

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    Costimulatory receptors such as glucocorticoid-induced tumor necrosis factor receptor-related protein (GITR) play key roles in regulating the effector functions of T cells. In human clinical trials, however, GITR agonist antibodies have shown limited therapeutic effect, which may be due to suboptimal receptor clustering-mediated signaling. To overcome this potential limitation, a rational protein engineering approach is needed to optimize GITR agonist-based immunotherapies. Here we show a bispecific molecule consisting of an anti-PD-1 antibody fused with a multimeric GITR ligand (GITR-L) that induces PD-1-dependent and FcΞ³R-independent GITR clustering, resulting in enhanced activation, proliferation and memory differentiation of primed antigen-specific GITR+PD-1+ T cells. The anti-PD-1-GITR-L bispecific is a PD-1-directed GITR-L construct that demonstrated dose-dependent, immunologically driven tumor growth inhibition in syngeneic, genetically engineered and xenograft humanized mouse tumor models, with a dose-dependent correlation between target saturation and Ki67 and TIGIT upregulation on memory T cells. Anti-PD-1-GITR-L thus represents a bispecific approach to directing GITR agonism for cancer immunotherapy
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