Facile and sustainable synthesis of nitrogen-doped polymer and carbon porous spheres

International audienceThe development of green, sustainable and simple synthesis pathways for the design of polymer and carbonaceous materials with well controlled features is of great importance for many fields of applications. Herein, we report a green synthesis method for polymer and carbon particles with well-defined shape and size. This approach involves the use of green precursors, water as solvent, no templates 10 under ambient temperature and pressure conditions, simultaneously. Green polymer resins (phloroglucinol-glyoxylic acid) and a catalyst/nitrogen source (triethylenediamine) are dissolved in water at room temperature resulting in polymer particles which by subsequent thermal treatment transforms in carbon particles. Mainly spherical carbon particles with controlled size from 500 nm to 10 µm were obtained by simply adjusting the experimental conditions, i.e., the synthesis time and the molar ratio between the precursors or solvent. In some conditions, flower-like morphology was obtained as well. The synthesis mechanism from polymer resin spheres 15 formation to their conversion into carbon sphere was determined by several techniques, i.e., 13 C NMR spectroscopy, SEM, XPS and TPD-MS (temperature programmed desorption coupled by mass spectrometer). 2

From rhizosphere to detritusphere – Soil structure formation driven by plant roots and the interactions with soil biota

Roots and the associated soil directly affected by root activity, termed the rhizosphere, have both been extensively studied and recognized for their crucial role in soil functioning. The formation of the rhizosphere is primarily driven by the effect of roots on shaping the physical structure of the soil, which in turn has direct feedbacks on the interactions between physical, biological and chemical processes. As a result, the rhizosphere is a hot spot for microbial activity, cycling of nutrients and turnover of organic matter. Despite the pivotal role of soil structure in controlling rhizosphere processes, we still lack a quantitative description and understanding of the interrelationships of root-systems and soil in the creation and stabilization of soil structure. We provide a comprehensive review of current knowledge and novel insights into processes that drive the formation and stabilization of soil structure in the rhizosphere. These processes are regulated by multiple indirect and direct pathways, involving root growth, the production of rhizodeposits and root hairs, as well as the activity of soil microorganisms and fauna. Further, we highlight that rhizosphere processes may persist and evolve after root death to an extent currently largely unknown. Finally, we identify five pertinent challenges that should be addressed to fully apprehend rhizosphere processes and thus harness the potential resilience of plant-soil interactions. These challenges include refining structural assessment and sampling of rhizosheaths, examining the rhizosphere in-situ and bridging the gap between solid phase and pore scale research. In our view, overcoming these obstacles can be accomplished by combining the power of imaging and isotopic approaches, especially at the field scale, encompassing diverse soils and plant species. The ultimate objective of future research should be to upscale rhizosphere processes by conducting more field experiments in concert with modeling efforts, under the umbrella of collaborative interdisciplinary research

Circadian control of DRP1 activity regulates mitochondrial dynamics and bioenergetics

Mitochondrial fission-fusion dynamics and mitochondrial bioenergetics, including oxidative phosphorylation and generation of ATP, are strongly clock controlled. Here we show that these circadian oscillations depend on circadian modification of dynamin-related protein 1 (DRP1), a key mediator of mitochondrial fission. We used a combination of in vitro and in vivo models, including human skin fibroblasts and DRP1-deficient or clock-deficient mice, to show that these dynamics are clock controlled via circadian regulation of DRP1. Genetic or pharmacological abrogation of DRP1 activity abolished circadian network dynamics and mitochondrial respiratory activity and eliminated circadian ATP production. Pharmacological silencing of pathways regulating circadian metabolism and mitochondrial function (e.g., sirtuins, AMPK) also altered DRP1 phosphorylation, and abrogation of DRP1 activity impaired circadian function. Our findings provide new insight into the crosstalk between the mitochondrial network and circadian cycles

DNA methylation in glioblastoma: impact on gene expression and clinical outcome

International audienceBACKGROUND: Changes in promoter DNA methylation pattern of genes involved in key biological pathways have been reported in glioblastoma. Genome-wide assessments of DNA methylation levels are now required to decipher the epigenetic events involved in the aggressive phenotype of glioblastoma, and to guide new treatment strategies. RESULTS: We performed a whole-genome integrative analysis of methylation and gene expression profiles in 40 newly diagnosed glioblastoma patients. We also screened for associations between the level of methylation of CpG sites and overall survival in a cohort of 50 patients uniformly treated by surgery, radiotherapy and chemotherapy with concomitant and adjuvant temozolomide (STUPP protocol). The methylation analysis identified 616 CpG sites differentially methylated between glioblastoma and control brain, a quarter of which was differentially expressed in a concordant way. Thirteen of the genes with concordant CpG sites displayed an inverse correlation between promoter methylation and expression level in glioblastomas: B3GNT5, FABP7, ZNF217, BST2, OAS1, SLC13A5, GSTM5, ME1, UBXD3, TSPYL5, FAAH, C7orf13, and C3orf14. Survival analysis identified six CpG sites associated with overall survival. SOX10 promoter methylation status (two CpG sites) stratified patients similarly to MGMT status, but with a higher Area Under the Curve (0.78 vs. 0.71, p-value < 5e-04). The methylation status of the FNDC3B, TBX3, DGKI, and FSD1 promoters identified patients with MGMT-methylated tumors that did not respond to STUPP treatment (p-value < 1e-04). CONCLUSIONS: This study provides the first genome-wide integrative analysis of DNA methylation and gene expression profiles obtained from the same GBM cohort. We also present a methylome-based survival analysis for one of the largest uniformly treated GBM cohort ever studied, for more than 27,000 CpG sites. We have identified genes whose expression may be tightly regulated by epigenetic mechanisms and markers that may guide treatment decisions

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2

Widespread pesticide distribution in the European atmosphere questions their degradability in air

Risk assessment of pesticide impacts on remote ecosystems makes use of model-estimated degradation in air. Recent studies suggest these degradation rates to be overestimated, questioning current pesticide regulation. Here, we investigated the concentrations of 76 pesticides in Europe at 29 rural, coastal, mountain, and polar sites during the agricultural application season. Overall, 58 pesticides were observed in the European atmosphere. Low spatial variation of 7 pesticides suggests continental-scale atmospheric dispersal. Based on concentrations in free tropospheric air and at Arctic sites, 22 pesticides were identified to be prone to long-range atmospheric transport, which included 15 substances approved for agricultural use in Europe and 7 banned ones. Comparison between concentrations at remote sites and those found at pesticide source areas suggests long atmospheric lifetimes of atrazine, cyprodinil, spiroxamine, tebuconazole, terbuthylazine, and thiacloprid. In general, our findings suggest that atmospheric transport and persistence of pesticides have been underestimated and that their risk assessment needs to be improved

Widespread pesticide distribution in the European atmosphere questions their degradability in air

Risk assessment of pesticide impacts on remote ecosystems makes use of model-estimated degradation in air. Recent studies suggest these degradation rates to be overestimated, questioning current pesticide regulation. Here, we investigated the concentrations of 76 pesticides in Europe at 29 rural, coastal, mountain, and polar sites during the agricultural application season. Overall, 58 pesticides were observed in the European atmosphere. Low spatial variation of 7 pesticides suggests continental-scale atmospheric dispersal. Based on concentrations in free tropospheric air and at Arctic sites, 22 pesticides were identified to be prone to long-range atmospheric transport, which included 15 substances approved for agricultural use in Europe and 7 banned ones. Comparison between concentrations at remote sites and those found at pesticide source areas suggests long atmospheric lifetimes of atrazine, cyprodinil, spiroxamine, tebuconazole, terbuthylazine, and thiacloprid. In general, our findings suggest that atmospheric transport and persistence of pesticides have been underestimated and that their risk assessment needs to be improved

COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study

Background: The ISARIC prospective multinational observational study is the largest cohort of hospitalized patients with COVID-19. We present relationships of age, sex, and nationality to presenting symptoms. Methods: International, prospective observational study of 60 109 hospitalized symptomatic patients with laboratory-confirmed COVID-19 recruited from 43 countries between 30 January and 3 August 2020. Logistic regression was performed to evaluate relationships of age and sex to published COVID-19 case definitions and the most commonly reported symptoms. Results: ‘Typical’ symptoms of fever (69%), cough (68%) and shortness of breath (66%) were the most commonly reported. 92% of patients experienced at least one of these. Prevalence of typical symptoms was greatest in 30- to 60-year-olds (respectively 80, 79, 69%; at least one 95%). They were reported less frequently in children (≤ 18 years: 69, 48, 23; 85%), older adults (≥ 70 years: 61, 62, 65; 90%), and women (66, 66, 64; 90%; vs. men 71, 70, 67; 93%, each P &lt; 0.001). The most common atypical presentations under 60 years of age were nausea and vomiting and abdominal pain, and over 60 years was confusion. Regression models showed significant differences in symptoms with sex, age and country. Interpretation: This international collaboration has allowed us to report reliable symptom data from the largest cohort of patients admitted to hospital with COVID-19. Adults over 60 and children admitted to hospital with COVID-19 are less likely to present with typical symptoms. Nausea and vomiting are common atypical presentations under 30 years. Confusion is a frequent atypical presentation of COVID-19 in adults over 60 years. Women are less likely to experience typical symptoms than men

De la collecte au bilan : Les multiples utilisations des outils de suivi de l'enquête « Mon quartier, mes voisins »

Au printemps 2018, une enquête sur les relations de voisinage menée par l’Ined et le Centre Max Weber (Cnrs) a permis de collecter 2752 questionnaires auprès d’habitants de 7 types de quartiers aux caractéristiques socio-spatiales différentes et déclinés en régions parisienne et lyonnaise (soit 14 quartiers au sein desquels des périmètres d’étude appelés « voisinages statistiques raisonnés » – VSR - ont été délimités). Deux-tiers des répondants découlent d’un tirage aléatoire au sein d’une base de logements constituée par VSR spécialement pour l’enquête. Le dernier tiers a été recruté par la méthode de type boule de neige en suivant les réseaux de voisinage déclarés par les répondants. Ces deux échantillons répondent au doublon objectif initial de maintenir une certaine représentativité tout en disposant de la description d’un réseau de voisinage minimal. L’analyse des cahiers papier utilisés par les 40 enquêteurs pour effectuer le suivi d’exploitation des logements à enquêter nous donne a posteriori l’opportunité d’exploiter une quantité importante de paradonnées pour évaluer le protocole mis en œuvre et proposer des pistes pour de futures enquêtes. L’étude de ces données, pour la région parisienne, a révélé qu’en moyenne, 5,8 tentatives de contact ont été réalisées par logement, dont 5,5 passages au domicile. Le seuil de 10 tentatives de contact infructueuses avant d’arrêter l’effort d’exploitation d’un logement semble raisonnable, au-delà, le rapport coûts/bénéfices est défavorable. Les données révèlent des effets inattendus : les passages le mercredi, le week-end et en fin de journée nous semblaient a priori plus opportuns, alors que les résultats montrent un taux de contact plus élevé en début de semaine. De même, les passages le matin semblent plus propices aux contacts et à la participation, tandis que les passages en soirée donnent plutôt lieu à des prises de rendez-vous. De plus, les profils des personnes enquêtées diffèrent en fonction du moment d’enquête, il est donc nécessaire de faire varier les jours et heures de passage pour réduire les biais de l’échantillon. À ce titre, notre protocole de ré-exploitation des primo-refusants (prévue dans un délai de 3 semaines) n’a pas permis d’augmenter considérablement le volume de questionnaires, mais il a permis de toucher des personnes plus difficiles d’accès ou se sentant éloignées de la thématique de l’enquête et déclarant peu de relations de voisinage, contribuant ainsi à minimiser les biais de l’échantillon. Enfin, il semblerait que la prise de RDV représente une marque d’adhésion à l’enquête avec un taux de participation de ces logements nettement supérieur. Au vu de ces éléments, la plus-value des outils de suivi dans le bilan d’une enquête semble évidente. Il semble alors avantageux, lorsque le budget de l’enquête le permet, de privilégier la saisie du suivi de terrain sur des outils de collecte numériques, par rapport à des outils papier classiques nécessitant une saisie post-enquête chronophage