278 research outputs found
Representations of Lie superalgebras of Cartan type (I): a minimal parabolic category
In this paper, we study the BGG category for graded
Lie superalgebras of Cartan type, associated with certain "minimal parabolic"
subalgebra. What follows are the main results.
(1) We classify and precisely describe the blocks of .
(2) We investigate indecomposable tilting modules and projective modules in
, and compute their character formulas.Comment: 48 page
Identification and Nearly Full-Length Genome Characterization of Novel Porcine Bocaviruses
The genus bocavirus includes bovine parvovirus (BPV), minute virus of canines (MVC), and a group of human bocaviruses (HBoV1-4). Using sequence-independent single primer amplification (SISPA), a novel bocavirus group was discovered with high prevalence (12.59%) in piglet stool samples. Two nearly full-length genome sequences were obtained, which were approximately 5,100 nucleotides in length. Multiple alignments revealed that they share 28.7–56.8% DNA sequence identity with other members of Parvovirinae. Phylogenetic analyses indicated their closest neighbors were members of the genus bocavirus. The new viruses had a putative non-structural NP1 protein, which was unique to bocaviruses. They were provisionally named porcine bocavirus 1 and 2 (PBoV1, PBoV2). PBoV1 and PBoV2 shared 94.2% nucleotide identity in NS1 gene sequence, suggesting that they represented two different bocavirus species. Two additional samples (6V, 7V) were amplified for 2,407 bp and 2,434 bp products, respectively, including a partial NP1 gene and the complete VP1 gene; Phylogenetic analysis indicated that 6Vand 7V grouped with PBoV1 and PBoV2 in the genus of bocavirus, but were in the separate clusters. Like other parvoviruses, PBoV1, PBoV2, 6Vand 7V also contained a putative secretory phospholipase A2 (sPLA2) motif in the VP1 unique region, with a conserved HDXXY motif in the catalytic center. The conserved motif YXGXF of the Ca2+-binding loop of sPLA2 identified in human bocavirus was also found in porcine bocavirus, which differs from the YXGXG motif carried by most other parvoviruses. The observation of PBoV and potentially other new bocavirus genus members may aid in molecular and functional characterization of the genus bocavirus
Marine Polysaccharides in Pharmaceutical Applications: An Overview
The enormous variety of polysaccharides that can be extracted from marine plants and animal organisms or produced by marine bacteria means that the field of marine polysaccharides is constantly evolving. Recent advances in biological techniques allow high levels of polysaccharides of interest to be produced in vitro. Biotechnology is a powerful tool to obtain polysaccharides from a variety of micro-organisms, by controlling the growth conditions in a bioreactor while tailoring the production of biologically active compounds. Following an overview of the current knowledge on marine polysaccharides, with special attention to potential pharmaceutical applications and to more recent progress on the discovering of new polysaccharides with biological appealing characteristics, this review will focus on possible strategies for chemical or physical modification aimed to tailor the final properties of interest
Genome-Wide Association Study for Femoral Neck Bone Geometry
Poor femoral neck bone geometry at the femur is an important risk factor for hip fracture. We conducted a genome-wide association study (GWAS) of femoral neck bone geometry, examining approximately 379,000 eligible single-nucleotide polymorphisms (SNPs) in 1000 Caucasians. A common genetic variant, rs7430431 in the receptor transporting protein 3 (RTP3) gene, was identified in strong association with the buckling ratio (BR, P = 1.6 × 10−7), an index of bone structural instability, and with femoral cortical thickness (CT, P = 1.9 × 10−6). The RTP3 gene is located in 3p21.31, a region that we found to be linked with CT (LOD = 2.19, P = 6.0 × 10−4) in 3998 individuals from 434 pedigrees. The replication analyses in 1488 independent Caucasians and 2118 Chinese confirmed the association of rs7430431 to BR and CT (combined P = 7.0 × 10−3 for BR and P = 1.4 × 10−2 for CT). In addition, 350 hip fracture patients and 350 healthy control individuals were genotyped to assess the association of the RTP3 gene with the risk of hip fracture. Significant association between a nearby common SNP, rs10514713 of the RTP3 gene, and hip fracture (P = 1.0 × 10−3) was found. Our observations suggest that RTP3 may be a novel candidate gene for femoral neck bone geometry. © 2010 American Society for Bone and Mineral Researc
International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database - the quality controlled standard tool for routine identification of human and animal pathogenic fungi
Human and animal fungal pathogens are a growing threat worldwide leading to emerging infections and creating new risks for established ones. There is a growing need for a rapid and accurate identification of pathogens to enable early diagnosis and targeted antifungal therapy. Morphological and biochemical identification methods are time-consuming and require trained experts. Alternatively, molecular methods, such as DNA barcoding, a powerful and easy tool for rapid monophasic identification, offer a practical approach for species identification and less demanding in terms of taxonomical expertise. However, its wide-spread use is still limited by a lack of quality-controlled reference databases and the evolving recognition and definition of new fungal species/complexes. An international consortium of medical mycology laboratories was formed aiming to establish a quality controlled ITS database under the umbrella of the ISHAM working group on "DNA barcoding of human and animal pathogenic fungi." A new database, containing 2800 ITS sequences representing 421 fungal species, providing the medical community with a freely accessible tool at http://www.isham.org and http://its.mycologylab.org/ to rapidly and reliably identify most agents of mycoses, was established. The generated sequences included in the new database were used to evaluate the variation and overall utility of the ITS region for the identification of pathogenic fungi at intra-and interspecies level. The average intraspecies variation ranged from 0 to 2.25%. This highlighted selected pathogenic fungal species, such as the dermatophytes and emerging yeast, for which additional molecular methods/genetic markers are required for their reliable identification from clinical and veterinary specimens.This study was supported by an National Health and Medical Research Council of Australia (NH&MRC) grant [#APP1031952] to W Meyer, S Chen, V Robert, and D Ellis; CNPq [350338/2000-0] and FAPERJ [E-26/103.157/2011] grants to RM Zancope-Oliveira; CNPq [308011/2010-4] and FAPESP [2007/08575-1] Fundacao de Amparo Pesquisa do Estado de So Paulo (FAPESP) grants to AL Colombo; PEst-OE/BIA/UI4050/2014 from Fundacao para a Ciencia e Tecnologia (FCT) to C Pais; the Belgian Science Policy Office (Belspo) to BCCM/IHEM; the MEXBOL program of CONACyT-Mexico, [ref. number: 1228961 to ML Taylor and [122481] to C Toriello; the Institut Pasteur and Institut de Veil le Sanitaire to F Dromer and D Garcia-Hermoso; and the grants from the Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq) and the Fundacao de Amparo a Pesquisa do Estado de Goias (FAPEG) to CM de Almeida Soares and JA Parente Rocha. I Arthur would like to thank G Cherian, A Higgins and the staff of the Molecular Diagnostics Laboratory, Division of Microbiology and Infectious Diseases, Path West, QEII Medial Centre. Dromer would like to thank for the technical help of the sequencing facility and specifically that of I, Diancourt, A-S Delannoy-Vieillard, J-M Thiberge (Genotyping of Pathogens and Public Health, Institut Pasteur). RM Zancope-Oliveira would like to thank the Genomic/DNA Sequencing Platform at Fundacao Oswaldo Cruz-PDTIS/FIOCRUZ [RPT01A], Brazil for the sequencing. B Robbertse and CL Schoch acknowledge support from the Intramural Research Program of the NIH, National Library of Medicine. T Sorrell's work is funded by the NH&MRC of Australia; she is a Sydney Medical School Foundation Fellow.info:eu-repo/semantics/publishedVersio
Measurement of ultra-high-energy diffuse gamma-ray emission of the Galactic plane from 10 TeV to 1 PeV with LHAASO-KM2A
The diffuse Galactic -ray emission, mainly produced via interactions
between cosmic rays and the interstellar medium and/or radiation field, is a
very important probe of the distribution, propagation, and interaction of
cosmic rays in the Milky Way. In this work we report the measurements of
diffuse -rays from the Galactic plane between 10 TeV and 1 PeV
energies, with the square kilometer array of the Large High Altitude Air Shower
Observatory (LHAASO). Diffuse emissions from the inner
(, ) and outer
(, ) Galactic plane are detected with
and significance, respectively. The outer Galactic
plane diffuse emission is detected for the first time in the very- to
ultra-high-energy domain (~TeV). The energy spectrum in the inner Galaxy
regions can be described by a power-law function with an index of
, which is different from the curved spectrum as expected from
hadronic interactions between locally measured cosmic rays and the
line-of-sight integrated gas content. Furthermore, the measured flux is higher
by a factor of than the prediction. A similar spectrum with an index of
is found in the outer Galaxy region, and the absolute flux for
TeV is again higher than the prediction for hadronic
cosmic ray interactions. The latitude distributions of the diffuse emission are
consistent with the gas distribution, while the longitude distributions show
clear deviation from the gas distribution. The LHAASO measurements imply that
either additional emission sources exist or cosmic ray intensities have spatial
variations.Comment: 12 pages, 8 figures, 5 tables; accepted for publication in Physical
Review Letters; source mask file provided as ancillary fil
Does or did the supernova remnant Cassiopeia A operate as a PeVatron?
For decades, supernova remnants (SNRs) have been considered the prime sources
of Galactic Cosmic rays (CRs). But whether SNRs can accelerate CR protons to
PeV energies and thus dominate CR flux up to the knee is currently under
intensive theoretical and phenomenological debate. The direct test of the
ability of SNRs to operate as CR PeVatrons can be provided by ultrahigh-energy
(UHE; ~TeV) -rays. In this context, the historical
SNR Cassiopeia A (Cas A) is considered one of the most promising target for UHE
observations. This paper presents the observation of Cas A and its vicinity by
the LHAASO KM2A detector. The exceptional sensitivity of LHAASO KM2A in the UHE
band, combined with the young age of Cas A, enabled us to derive stringent
model-independent limits on the energy budget of UHE protons and nuclei
accelerated by Cas A at any epoch after the explosion. The results challenge
the prevailing paradigm that Cas A-type SNRs are major suppliers of PeV CRs in
the Milky Way.Comment: 11 pages, 3 figures, Accepted by the APJ
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