A Comparison of Approaches to Estimate the Inbreeding Coefficient and Pairwise Relatedness Using Genomic and Pedigree Data in a Sheep Population

Genome-wide SNP data provide a powerful tool to estimate pairwise relatedness among individuals and individual inbreeding coefficient. The aim of this study was to compare methods for estimating the two parameters in a Finnsheep population based on genome-wide SNPs and genealogies, separately. This study included ninety-nine Finnsheep in Finland that differed in coat colours (white, black, brown, grey, and black/white spotted) and were from a large pedigree comprising 319 119 animals. All the individuals were genotyped with the Illumina Ovine SNP50K BeadChip by the International Sheep Genomics Consortium. We identified three genetic subpopulations that corresponded approximately with the coat colours (grey, white, and black and brown) of the sheep. We detected a significant subdivision among the colour types (FST = 5.4%, P<0.05). We applied robust algorithms for the genomic estimation of individual inbreeding (FSNP) and pairwise relatedness (ΦSNP) as implemented in the programs KING and PLINK, respectively. Estimates of the two parameters from pedigrees (FPED and ΦPED) were computed using the RelaX2 program. Values of the two parameters estimated from genomic and genealogical data were mostly consistent, in particular for the highly inbred animals (e.g. inbreeding coefficient F>0.0625) and pairs of closely related animals (e.g. the full- or half-sibs). Nevertheless, we also detected differences in the two parameters between the approaches, particularly with respect to the grey Finnsheep. This could be due to the smaller sample size and relative incompleteness of the pedigree for them

Resource allocation of in vitro fertilization: a nationwide register-based cohort study

<p>Abstract</p> <p>Background</p> <p>Infertility is common and in vitro fertilization (IVF) is a widely used treatment. In IVF the need increases and the effectiveness and appropriateness decrease by age. The purpose of this study was to describe allocation of resources for IVF by women's age, socioeconomic position, area of residence and treatment sector (public vs. private) and to discuss how fairly the IVF resources are allocated in Finland.</p> <p>Methods</p> <p>Women who received IVF between 1996 and 1998 (N = 9175) were identified from the reimbursement records of the Social Insurance Institution (SII). Information on IVF women's background characteristics came from the Central Population Register and the SII, on treatment costs from IVF clinics and the SII, and on births from the Medical Birth Register. The main outcome measures were success of IVF by number of cycles and treated women, expenditures per IVF cycles, per women, per live-birth, and per treatment sector, and private and public expenditures. Expenditures were estimated from health care visits and costs.</p> <p>Results</p> <p>During a mean period of 1.5 years, older women (women aged 40 or older) received 1.4 times more IVF treatment cycles than younger women (women aged below 30). The success rate decreased by age: from 22 live births per 100 cycles among younger women to 6 per 100 among older women. The mean cost of a live birth increased by age: compared to younger women, costs per born live birth of older women were 3-fold. Calculated by population, public expenditure was allocated most to young women and women from the highest socioeconomic position. Regional differences were not remarkable.</p> <p>Conclusion</p> <p>Children of older infertile women involve more expense due to the lower success rates of IVF. Socioeconomic differences suggest unfair resource allocation in Finland.</p

Plant cell culture technology in the cosmetics and food industries : current state and future trends

The production of drugs, cosmetics, and food which are derived from plant cell and tissue cultures has a long tradition. The emerging trend of manufacturing cosmetics and food products in a natural and sustainable manner has brought a new wave in plant cell culture technology over the past 10 years. More than 50 products based on extracts from plant cell cultures have made their way into the cosmetics industry during this time, whereby the majority is produced with plant cell suspension cultures. In addition, the first plant cell culture-based food supplement ingredients, such as Echigena Plus and Teoside 10, are now produced at production scale. In this mini review, we discuss the reasons for and the characteristics as well as the challenges of plant cell culture-based productions for the cosmetics and food industries. It focuses on the current state of the art in this field. In addition, two examples of the latest developments in plant cell culture-based food production are presented, that is, superfood which boosts health and food that can be produced in the lab or at home

Thermal-hydraulic–iodine chemistry coupling: Insights gained from the SARNET benchmark on the THAI experiments Iod-11 and Iod-12

In the SARNET2 WP8.3 THAI Benchmark the capability of current accident codes to simulate the iodine transport and behavior in sub-divided containments has been assessed. In THAI test Iod-11 and Iod-12, made available for the benchmark, the distribution of molecular iodine (I2) in the five compartments of the 60 m3 vessel under stratified and well mixed conditions was measured. The main processes addressed are the I2 transport with the atmospheric flows and the interaction of I2 with the steel surface. During test Iod-11 the surfaces in contact with the containment atmosphere were dry. In Iod-12, steam was released, which condensed on the walls.Nine post-test calculations were conducted for Iod-11 and eight for Iod-12 by seven organizations using four different codes: ASTEC-IODE (CIEMAT, GRS and TUS), COCOSYS-AIM (AREVA, FZ-Jülich and GRS), ECART (Pisa University) and MELCOR (Pisa University and VTT). Different nodalizations of the THAI vessel with 20–65 zones were applied.Generally, for both tests the analytical thermal-hydraulic results are in a fairly good agreement with the measurements. Only the calculated local relative humidity deviates significantly from the measured values in all calculations. The results in Iod-11 for the local I2 concentration in the gaseous phase are quite diverse. Three calculations show only minor deviations from the measurement, whereas the others are substantially different from the measured I2 concentrations. For Iod-12, no calculation delivers a satisfactory evolution of the I2 concentration in all five compartments of the vessel. There are three mediocre results standing out in the Iod-11 exercise which are from the same user–code combinations. The discrepancies derive from various reasons which are discussed in the paper.In the benchmark a significant user effect was detected, i.e. results achieved with the same code differed considerably.This work highlights the need of a detailed iodine adsorption/desorption model and precise thermal-hydraulic modeling for an accurate simulation of I2 transport in a sub-divided containment, as well as experienced users or straight forward user guidelines

Buying into motherhood? Problematic consumption and ambivalence in transitional phases

Current theory on transitional consumption seems to rest on the premises that (1) consumption facilitates role transitions; (2) consumers know how to consume their way through these transitions; (3) consumers are motivated to approach new roles; and (4) consumption solves liminality. This perspective, however, offers an incomplete picture of consumption’s role in the management of major life transitions. This article explores the ways in which ambivalence is woven through consumption experiences in times of liminality. It reviews prior research on consumption, role transitions, and ambivalence in the context of women’s transition into motherhood. Findings are presented from an international interpretive study of women’s consumption experiences during their transition to motherhood. This paper’s findings suggest that while consumption can indeed play a positive role during role transitions, it can also, at other times, make transition a complicated, complex and confusing process