2,720 research outputs found
Are Our Institutions Flexible Enough?
The true aim of our Government is freedom and equality for our citizens. The Government assumes the role of big brother, arbiter, innovator, and, finally, conciliator over all our many free institutions
Expression, Purification, Crystallization and Preliminary X-Ray Analysis of \u3cem\u3ePseudomonas aeuginosa\u3c/em\u3e AlgX
AlgX is a periplasmic protein required for the production of the exopolysaccharide alginate in Pseudomonas sp. and Azotobacter vinelandii. AlgX has been overexpressed and purified and diffraction-quality crystals have been grown using iterative seeding and the hanging-drop vapor-diffusion method. The crystals grew as flat plates with unit-cell parameters a=46.4, b=120.6, c=86.9Å, β=95.7°. The cyrstals exhibited the symmetry of space group P21 and diffracted to a minimimum d-spacing of 2.1Å. On the basis of the Matthews coefficient (VM=2.25Å3 Da-1), two molecules were estimated to be present in the asymmetric unit
Cellular expression and crystal structure of the murine cytomegalovirus MHC-Iv glycoprotein, m153
Mouse cytomegalovirus (MCMV), a β-herpesvirus that establishes latent and persistent infections in mice, is a valuable model for studying complex virus-host interactions. MCMV encodes the m145 family of putative immunoevasins with predicted MHC-I structure. Functions attributed to some family members include downregulation of host MHC-I (m152) and NKG2D ligands (m145, m152, m155) and interaction with inhibitory or activating NK receptors (m157). We present the cellular, biochemical and structural characterization of m153, which is a heavily glycosylated homodimer, that does not require β2m or peptide, and is expressed at the surface of MCMV-infected cells. Its 2.4 Å crystal structure confirms that this compact molecule preserves an MHC-I-like fold and reveals a novel mode of dimerization, confirmed by site-directed mutagenesis, and a distinctive disulfide-stabilized extended amino terminus. The structure provides a useful framework for comparative analysis of the divergent members of the m145 family
The California Planet Survey. I. Four New Giant Exoplanets
We present precise Doppler measurements of four stars obtained during the past decade at Keck Observatory by the California Planet Survey (CPS). These stars, namely, HD 34445, HD 126614, HD 13931, and Gl 179, all show evidence for a single planet in Keplerian motion. We also present Doppler measurements from the Hobby-Eberly Telescope (HET) for two of the stars, HD 34445 and Gl 179, that confirm the Keck detections and significantly refine the orbital parameters. These planets add to the statistical properties of giant planets orbiting near or beyond the ice line, and merit follow-up by astrometry, imaging, and space-borne spectroscopy. Their orbital parameters span wide ranges of planetary minimum mass (M sin i = 0.38-1.9 M(Jup)), orbital period (P = 2.87-11.5 yr), semimajor axis (a = 2.1-5.2 AU), and eccentricity (e = 0.02-0.41). HD 34445 b (P = 2.87 yr, M sin i = 0.79 MJup, e = 0.27) is a massive planet orbiting an old, G-type star. We announce a planet, HD 126614 Ab, and an M dwarf, HD 126614 B, orbiting the metal-rich star HD 126614 (which we now refer to as HD 126614 A). The planet, HD 126614 Ab, has minimum mass M sin i = 0.38 MJup and orbits the stellar primary with period P = 3.41 yr and orbital separation a = 2.3 AU. The faint M dwarf companion, HD 126614 B, is separated from the stellar primary by 489 mas (33 AU) and was discovered with direct observations using adaptive optics and the PHARO camera at Palomar Observatory. The stellar primary in this new system, HD 126614 A, has the highest measured metallicity ([ Fe/ H] = + 0.56) of any known planet-bearing star. HD 13931 b (P = 11.5 yr, M sin i = 1.88 MJup, e = 0.02) is a Jupiter analog orbiting a near solar twin. Gl 179 b (P = 6.3 yr, M sin i = 0.82 M(Jup), e = 0.21) is a massive planet orbiting a faint M dwarf. The high metallicity of Gl 179 is consistent with the planet-metallicity correlation among M dwarfs, as documented recently by Johnson & Apps.NSF AST-0702821NASA NNX06AH52GMcDonald Observator
The Intermediate Filament Cytoskeleton of Macrophages
This study characterizes two-and three-dimensional ultrastructure and surface topography of polymerized networks of intermediate filaments (IF) isolated from mouse peritoneal macrophages. Isolated IF bound to monoclonal anti-IF antibodies in enzyme-linked immunosorbent assays. Immunogold labeling of IF with specific antibodies revealed that epitopes are distributed along filaments particularly at junctions where filaments interconnect. Networks of IF, viewed by scanning electron microscopy, organized as ropelike groups of interconnecting filaments which swirl and encircle each other to form three-dimensional lattices containing ellipsoidal-, circular-, and vacuole-shaped cavities. Cavity diameters were similar in size to organelles and vacuoles; diameters were grouped as small (12-288 nm), medium (0.3-1.7 μm), and large (2-3 μm). The walls of the cavities appeared as beaded structures with alternating globular and linear regions. Linear regions were 14 nm. Repeat distances taken from the central axis of globular regions were 23-27 nm. The lattice organization of IF observed in vitro was similar to images seen in vivo in Triton-insoluble cytoskeletons immunofluorescently labeled with specific antibodies. In whole cells processed for TEM, swirling bundles of IF were found encircling membranous vacuoles. Based on the lattice architecture of IF, cavity dimensions, and IF location, we postulate that intermediate filaments may function in the mechanical and spatial distribution of vacuoles in the cell cytoplasm
Extrasolar planet population synthesis IV. Correlations with disk metallicity, mass and lifetime
Context. This is the fourth paper in a series showing the results of planet
population synthesis calculations.
Aims. Our goal in this paper is to systematically study the effects of
important disk properties, namely disk metallicity, mass and lifetime on
fundamental planetary properties.
Methods. For a large number of protoplanetary disks we calculate a population
of planets with our core accretion formation model including planet migration
and disk evolution.
Results. We find a large number of correlations: Regarding the planetary
initial mass function, metallicity, disk mass and disk lifetime have different
roles: For high [Fe/H], giant planets are more frequent. For high disk masses,
giant planets are more massive. For long disk lifetimes, giant planets are both
more frequent and massive. At low metallicities, very massive giant planets
cannot form, but otherwise giant planet mass and metallicity are uncorrelated.
In contrast, planet masses and disk gas masses are correlated. The sweet spot
for giant planet formation is at 5 AU. In- and outside this distance, higher
planetesimals surface densities are necessary. Low metallicities can be
compensated by high disk masses, and vice versa, but not ad infinitum. At low
metallicities, giant planets only form outside the ice line, while at high
metallicities, giant planet formation occurs throughout the disk. The extent of
migration increases with disk mass and lifetime and usually decreases with
metallicity. No clear correlation of metallicity and the semimajor axis of
giant planets exists because in low [Fe/H] disks, planets start further out,
but migrate more, whereas for high [Fe/H] they start further in, but migrate
less. Close-in low mass planets have a lower mean metallicity than Hot
Jupiters.
Conclusions. The properties of protoplanetary disks are decisive for the
properties of planets, and leave many imprints.Comment: 23 pages, 16 figures. Accepted for A&
Method to compute the stress-energy tensor for the massless spin 1/2 field in a general static spherically symmetric spacetime
A method for computing the stress-energy tensor for the quantized, massless,
spin 1/2 field in a general static spherically symmetric spacetime is
presented. The field can be in a zero temperature state or a non-zero
temperature thermal state. An expression for the full renormalized
stress-energy tensor is derived. It consists of a sum of two tensors both of
which are conserved. One tensor is written in terms of the modes of the
quantized field and has zero trace. In most cases it must be computed
numerically. The other tensor does not explicitly depend on the modes and has a
trace equal to the trace anomaly. It can be used as an analytic approximation
for the stress-energy tensor and is equivalent to other approximations that
have been made for the stress-energy tensor of the massless spin 1/2 field in
static spherically symmetric spacetimes.Comment: 34 pages, no figure
P. aeruginosa SGNH Hydrolase-Like Proteins AlgJ and AlgX Have Similar Topology but Separate and Distinct Roles in Alginate Acetylation
The O-acetylation of polysaccharides is a common modification used by pathogenic organisms to protect against external forces. Pseudomonas aeruginosa secretes the anionic, O-acetylated exopolysaccharide alginate during chronic infection in the lungs of cystic fibrosis patients to form the major constituent of a protective biofilm matrix. Four proteins have been implicated in the O-acetylation of alginate, AlgIJF and AlgX. To probe the biological function of AlgJ, we determined its structure to 1.83 Å resolution. AlgJ is a SGNH hydrolase-like protein, which while structurally similar to the N-terminal domain of AlgX exhibits a distinctly different electrostatic surface potential. Consistent with other SGNH hydrolases, we identified a conserved catalytic triad composed of D190, H192 and S288 and demonstrated that AlgJ exhibits acetylesterase activity in vitro. Residues in the AlgJ signature motifs were found to form an extensive network of interactions that are critical for O-acetylation of alginate in vivo. Using two different electrospray ionization mass spectrometry (ESI-MS) assays we compared the abilities of AlgJ and AlgX to bind and acetylate alginate. Binding studies using defined length polymannuronic acid revealed that AlgJ exhibits either weak or no detectable polymer binding while AlgX binds polymannuronic acid specifically in a length-dependent manner. Additionally, AlgX was capable of utilizing the surrogate acetyl-donor 4-nitrophenyl acetate to catalyze the O-acetylation of polymannuronic acid. Our results, combined with previously published in vivo data, suggest that the annotated O-acetyltransferases AlgJ and AlgX have separate and distinct roles in O-acetylation. Our refined model for alginate acetylation places AlgX as the terminal acetlytransferase and provides a rationale for the variability in the number of proteins required for polysaccharide O-acetylation
Radium contamination in the area around Dalgety Bay
In this report, the Committee on Medical Aspects of Radiation in the Environment (COMARE) presents a comprehensive review of the radium contamination in the area around Dalgety Bay. This report covers the history of the site, the type and extent of the contamination, the recent investigations and the cancer epidemiology for the area. The report also considers the implications for other similarly contaminated sites
Limits on spin-dependent WIMP-nucleon cross-sections from the first ZEPLIN-II data
The first underground data run of the ZEPLIN-II experiment has set a limit on
the nuclear recoil rate in the two-phase xenon detector for direct dark matter
searches. In this paper the results from this run are converted into the limits
on spin-dependent WIMP-proton and WIMP-neutron cross-sections. The minimum of
the curve for WIMP-neutron cross-section corresponds to 0.07 pb at a WIMP mass
of around 65 GeV.Comment: 12 pages, 2 figures, to be published in Physics Letters
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