Strong paleoclimatic legacies in current plant functional diversity patterns across Europe

Numerous studies indicate that environmental changes during the late Quaternary have elicited long‐term disequilibria between species diversity and environment. Despite its importance for ecosystem functioning, the importance of historical environmental conditions as determinants of FD (functional diversity) remains largely unstudied. We quantified the geographic distributions of plant FD (richness and dispersion) across Europe using distribution and functional trait information for 2702 plant species. We then compared the importance of historical and contemporary factors to determine the relevance of past conditions as predictors of current plant FD in Europe. For this, we compared the strength of the relationships between FD with temperature and precipitation stability since the LGM (Last Glacial Maximum), accessibility to LGM refugia, and contemporary environmental conditions (climate, productivity, soil, topography, and land use). Functional richness and dispersion exhibited geographic patterns with strong associations to the environmental history of the region. The effect size of accessibility to LGM refugia and climate stability since the LGM was comparable to that of the contemporary predictors. Both functional richness and dispersion increased with temperature stability since the LGM and accessibility to LGM refugia. Functional richness' geographic pattern was primarily associated with accessibility to LGM refugia growing degree‐days, land use heterogeneity, diversity of soil types, and absolute minimum winter temperature. Functional dispersion's geographic pattern was primarily associated with accessibility to LGM refugia growing degree‐days and absolute minimum winter temperature. The high explained variance and model support of historical predictors are consistent with the idea that long‐term variability in environmental conditions supplements contemporary factors in shaping FD patterns at continental scales. Given the importance of FD for ecosystem functioning, future climate change may elicit not just short‐term shifts in ecosystem functioning, but also long‐term functional disequilibria

Influence of spatial and temporal dynamics of agricultural practices on the lesser kestrel

1. European agriculture is facing dramatic changes that are likely to have marked impacts on farmland biodiversity. There is an urgent need to develop land management strategies compatible with the conservation of biodiversity.2. We applied a spatially explicit behaviour-based model to assess how farmland management and the pattern of events across the annual farming calendar influences the foraging decisions of lesser kestrels Falco naumanni in a cereal steppe landscape. Moreover, we simulated the most likely scenarios of future agricultural changes to predict its impacts on lesser kestrel breeding success. Lesser kestrels have been the subject of serious conservation concern and constitute a good model species to judge impacts on farmland species more widely.3. Our results show that the location of cereal and fallow patches within a 2-km radius of a kestrel colony influences the total food supply delivered to the nestlings, explaining the differences in breeding success between years and colonies. Furthermore, the particular sequence in which patches are harvested by farmers is also predicted to influence offspring survival.4. Agricultural intensification, simulated by increasing the proportion of cereal fields, is predicted to negatively influence breeding success. However, the field harvesting sequence can play an important role in alleviating the effects of the increased percentage of cereal, as demonstrated by the higher breeding success obtained when harvesting starts from patches farthest from the colonies. The replacement of cereal cultivation by low-intensity grazed fallows would not be detrimental for kestrels.5. Synthesis and applications. Our results highlight the effectiveness of behaviour-based models to evaluate the interacting effect of spatial and temporal dynamics of agricultural landscapes and predict the response of populations to environmental change. To optimize food availability for lesser kestrels, land managers should implement long rotational schemes with < 60% of the area under extensive cereal cultivation in a 2-km radius around colonies. Harvesting should start in the cereal patches farthest from colonies. Ideally, the predominant land use around colonies should be fallows. These outcomes illustrate how behaviour-based models can be applied to identify specific management recommendations that would improve the effectiveness of agri-environmental schemes, the most accepted tool for maintaining farmland landscapes

Convergent structure of multitrophic communities over three continents

Ecological theory predicts that communities using the same resources should have similar structure, but evolutionary constraints on colonization and niche shifts may hamper such convergence. Multitrophic communities of wasps exploiting fig fruits, which first evolved about 75MYA, do not show long-term “inheritance” of taxonomic (lineage) composition or species diversity. However, communities on three continents have converged ecologically in the presence and relative abundance of five insect guilds that we define. Some taxa fill the same niches in each community (phylogenetic niche conservatism). However, we show that overall convergence in ecological community structure depends also on a combination of niche shifts by resident lineages and local colonizations of figs by other insect lineages. Our study explores new ground, and develops new heuristic tools, in combining ecology and phylogeny to address patterns in the complex multitrophic communities of insect on plants, which comprise a large part of terrestrial biodiversity

Catastrophic senescence and semelparity in the Penna aging model

The catastrophic senescence of the Pacific salmon is among the initial tests used to validate the Penna aging model. Based on the mutation accumulation theory, the sudden decrease in fitness following reproduction may be solely attributed to the semelparity of the species. In this work, we report other consequences of mutation accumulation. Contrary to earlier findings, such dramatic manifestation of aging depends not only on the choice of breeding strategy but also on the value of the reproduction age, R, and the mutation threshold, T. Senescence is catastrophic when $T \leq R$. As the organism's tolerance for harmful genetic mutations increases, the aging process becomes more gradual. We observe senescence that is threshold dependent whenever T>R. That is, the sudden drop in survival rate occurs at age equal to the mutation threshold value

Emergent global patterns of ecosystem structure and function from a mechanistic general ecosystem model

Anthropogenic activities are causing widespread degradation of ecosystems worldwide, threatening the ecosystem services upon which all human life depends. Improved understanding of this degradation is urgently needed to improve avoidance and mitigation measures. One tool to assist these efforts is predictive models of ecosystem structure and function that are mechanistic: based on fundamental ecological principles. Here we present the first mechanistic General Ecosystem Model (GEM) of ecosystem structure and function that is both global and applies in all terrestrial and marine environments. Functional forms and parameter values were derived from the theoretical and empirical literature where possible. Simulations of the fate of all organisms with body masses between 10 µg and 150,000 kg (a range of 14 orders of magnitude) across the globe led to emergent properties at individual (e.g., growth rate), community (e.g., biomass turnover rates), ecosystem (e.g., trophic pyramids), and macroecological scales (e.g., global patterns of trophic structure) that are in general agreement with current data and theory. These properties emerged from our encoding of the biology of, and interactions among, individual organisms without any direct constraints on the properties themselves. Our results indicate that ecologists have gathered sufficient information to begin to build realistic, global, and mechanistic models of ecosystems, capable of predicting a diverse range of ecosystem properties and their response to human pressures

Change and Aging Senescence as an adaptation

Understanding why we age is a long-lived open problem in evolutionary biology. Aging is prejudicial to the individual and evolutionary forces should prevent it, but many species show signs of senescence as individuals age. Here, I will propose a model for aging based on assumptions that are compatible with evolutionary theory: i) competition is between individuals; ii) there is some degree of locality, so quite often competition will between parents and their progeny; iii) optimal conditions are not stationary, mutation helps each species to keep competitive. When conditions change, a senescent species can drive immortal competitors to extinction. This counter-intuitive result arises from the pruning caused by the death of elder individuals. When there is change and mutation, each generation is slightly better adapted to the new conditions, but some older individuals survive by random chance. Senescence can eliminate those from the genetic pool. Even though individual selection forces always win over group selection ones, it is not exactly the individual that is selected, but its lineage. While senescence damages the individuals and has an evolutionary cost, it has a benefit of its own. It allows each lineage to adapt faster to changing conditions. We age because the world changes.Comment: 19 pages, 4 figure

Biodiversity Loss and the Taxonomic Bottleneck: Emerging Biodiversity Science

Human domination of the Earth has resulted in dramatic changes to global and local patterns of biodiversity. Biodiversity is critical to human sustainability because it drives the ecosystem services that provide the core of our life-support system. As we, the human species, are the primary factor leading to the decline in biodiversity, we need detailed information about the biodiversity and species composition of specific locations in order to understand how different species contribute to ecosystem services and how humans can sustainably conserve and manage biodiversity. Taxonomy and ecology, two fundamental sciences that generate the knowledge about biodiversity, are associated with a number of limitations that prevent them from providing the information needed to fully understand the relevance of biodiversity in its entirety for human sustainability: (1) biodiversity conservation strategies that tend to be overly focused on research and policy on a global scale with little impact on local biodiversity; (2) the small knowledge base of extant global biodiversity; (3) a lack of much-needed site-specific data on the species composition of communities in human-dominated landscapes, which hinders ecosystem management and biodiversity conservation; (4) biodiversity studies with a lack of taxonomic precision; (5) a lack of taxonomic expertise and trained taxonomists; (6) a taxonomic bottleneck in biodiversity inventory and assessment; and (7) neglect of taxonomic resources and a lack of taxonomic service infrastructure for biodiversity science. These limitations are directly related to contemporary trends in research, conservation strategies, environmental stewardship, environmental education, sustainable development, and local site-specific conservation. Today’s biological knowledge is built on the known global biodiversity, which represents barely 20% of what is currently extant (commonly accepted estimate of 10 million species) on planet Earth. Much remains unexplored and unknown, particularly in hotspots regions of Africa, South Eastern Asia, and South and Central America, including many developing or underdeveloped countries, where localized biodiversity is scarcely studied or described. ‘‘Backyard biodiversity’’, defined as local biodiversity near human habitation, refers to the natural resources and capital for ecosystem services at the grassroots level, which urgently needs to be explored, documented, and conserved as it is the backbone of sustainable economic development in these countries. Beginning with early identification and documentation of local flora and fauna, taxonomy has documented global biodiversity and natural history based on the collection of ‘‘backyard biodiversity’’ specimens worldwide. However, this branch of science suffered a continuous decline in the latter half of the twentieth century, and has now reached a point of potential demise. At present there are very few professional taxonomists and trained local parataxonomists worldwide, while the need for, and demands on, taxonomic services by conservation and resource management communities are rapidly increasing. Systematic collections, the material basis of biodiversity information, have been neglected and abandoned, particularly at institutions of higher learning. Considering the rapid increase in the human population and urbanization, human sustainability requires new conceptual and practical approaches to refocusing and energizing the study of the biodiversity that is the core of natural resources for sustainable development and biotic capital for sustaining our life-support system. In this paper we aim to document and extrapolate the essence of biodiversity, discuss the state and nature of taxonomic demise, the trends of recent biodiversity studies, and suggest reasonable approaches to a biodiversity science to facilitate the expansion of global biodiversity knowledge and to create useful data on backyard biodiversity worldwide towards human sustainability

A comparative assessment of univariate longevity measures using zoological animal records

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/94449/1/acel861.pd

Trait evolution and the coexistence of a species swarm in the tropical forest understory

Part of PhD Dissertation of Brian Sedio. The paper also incorporates J. Wright's long term ecological data on Psychotria from BCI.1. A small number of species rich plant genera make a substantial contribution to the alpha diversity of tropical forests. These ‘species swarms’ (Gentry 1982) challenge a view of community assembly that maintains that niche overlap, and hence, the likelihood of competitive exclusion should increase with phylogenetic affinity. Related species may, however, occupy different microhabitats within a forest stand or, alternatively, differ ecologically in ways that allow them to coexist syntopically. 2. To explore the relationship between phylogenetic history and niche differentiation among sympatric, congeneric species, we performed phylogenetic analyses of microhabitat preferences, photosynthetic and hydraulic traits, and experimental responses to light and water availability for 20 species of Psychotria (Rubiaceae) from Barro Colorado Island (BCI), Panama. 3. The Psychotria present in small (3-m radius), circular plots were more closely related than expected by chance. Photosynthetic and hydraulic traits were both associated with species habitat distributions, but only hydraulic traits were conserved phylogenetically. Experimental responses to water availability were also conserved phylogenetically. Functional trait analyses revealed little or no evidence of niche partitioning within sites. 4. We conclude that Psychotria species’ responses to both light and moisture availability determine their microhabitat distributions on BCI and that evolutionarily conserved hydraulic traits lead to phylogenetic clustering of co-occurring species. 5. Synthesis. The evolutionary conservation of hydraulic traits related to soil moisture tolerance largely explains phylogenetic clustering in the local assembly of the hyperdiverse genus Psychotria. We suggest that close relatives are unlikely to exclude one another from shared habitats because resource availability is determined largely by asymmetric competition with the overstorey, rather than by competition with neighbouring understorey plants. In light of the recent biogeographic admixture in central Panama, the phylogenetic niche conservatism exhibited by Psychotria on BCI raises the possibility of an association between local microhabitats and the ancestral climatic regimes under which major Psychotria lineages evolved before arriving in sympatry.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/92470/1/Sedio2012.pd

Not poles apart: Antarctic soil fungal communities show similarities to those of the distant Arctic

Antarctica's extreme environment and geographical isolation offers a useful platform for testing the relative roles of environmental selection and dispersal barriers influencing fungal communities. The former process should lead to convergence in community composition with other cold environments, such as those in the Arctic. Alternatively, dispersal limitations should minimise similarity between Antarctica and distant northern landmasses. Using high-throughput sequencing, we show that Antarctica shares significantly more fungi with the Arctic, and more fungi display a bipolar distribution, than would be expected in the absence of environmental filtering. In contrast to temperate and tropical regions, there is relatively little endemism, and a strongly bimodal distribution of range sizes. Increasing southerly latitude is associated with lower endemism and communities increasingly dominated by fungi with widespread ranges. These results suggest that micro-organisms with well-developed dispersal capabilities can inhabit opposite poles of the Earth, and dominate extreme environments over specialised local specie