95 research outputs found

    A Block Slipping on a Sphere with Friction: Exact and Perturbative Solutions

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    A well studied problem in elementary mechanics is the location of the release point of a particle that slides on the surface of a frictionless sphere when it is released from rest at the top. We generalize this problem to include the effects of sliding friction and solve it by a perturbation expansion in the coefficient of sliding friction and by an exact integration of the equation of motion. A comparison of the two solutions identifies a parameter range where the perturbation series accurately represents the motion of the particle and another range where the perturbative solution fails qualitatively to describe the motion of the particle

    Code Assesses Risks Posed by Meteoroids and Orbital Debris

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    BUMPER II version 1.92e is a computer code for assessing the risk of damage from impacts of micrometeoroids and orbital debris on the International Space Station (ISS), including those parts of the ISS covered by shielding that affords partial protection against such impacts. (Other versions of BUMPER II have been written for other spacecraft.) Bumper II quantifies the probability of penetration of shielding and the damage to spacecraft equipment as functions of the size, shape, and orientation of the spacecraft; the parameters of its orbit; failure criteria that quantify impact damage at the threshold of failure for each spacecraft surface; and the impact-damage resistance of each spacecraft surface as defined by "ballistic limit equations" that return the size of a failure-causing particle as a function of target parameters (including materials, configurations, thicknesses, and gap distances) and impact conditions (impact velocity and the density and shape of the impactor). BUMPER II version 1.92e contains several dozen ballistic limit equations that are based on results from thousands of hypervelocity impact tests conducted by NASA on ISS shielding and other hardware, and on results from numerical simulations of impacts

    International Space Station (ISS) Soyuz Vehicle Descent Module Evaluation of Thermal Protection System (TPS) Penetration Characteristics

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    The descent module (DM) of the ISS Soyuz vehicle is covered by thermal protection system (TPS) materials that provide protection from heating conditions experienced during reentry. Damage and penetration of these materials by micrometeoroid and orbital debris (MMOD) impacts could result in loss of vehicle during return phases of the mission. The descent module heat shield has relatively thick TPS and is protected by the instrument-service module. The TPS materials on the conical sides of the descent module (referred to as backshell in this test plan) are exposed to more MMOD impacts and are relatively thin compared to the heat shield. This test program provides hypervelocity impact (HVI) data on materials similar in composition and density to the Soyuz TPS on the backshell of the vehicle. Data from this test program was used to update ballistic limit equations used in Soyuz TPS penetration risk assessments. The impact testing was coordinated by the NASA Johnson Space Center (JSC) Hypervelocity Impact Technology (HVIT) Group [1] in Houston, Texas. The HVI testing was conducted at the NASA-JSC White Sands Hypervelocity Impact Test Facility (WSTF) at Las Cruces, New Mexico. Figur

    Identification of individual root-knot nematodes using low coverage long-read sequencing

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    Root-knot nematodes (RKN; genus Meloidogyne) are polyphagous plant pathogens of great economic importance to agriculturalists globally. These species are small, diverse, and can be challenging for accurate taxonomic identification. Many of the most important crop pests confound analysis with simple genetic marker loci as they are polyploids of likely hybrid origin. Here we take a low-coverage, long-read genome sequencing approach to characterisation of individual root-knot nematodes. We demonstrate library preparation for Oxford Nanopore Technologies Flongle sequencing of low input DNA from individual juveniles and immature females, multiplexing up to twelve samples per flow cell. Taxonomic identification with Kraken 2 (a k-mer-based taxonomic assignment tool) is shown to reliably identify individual nematodes to species level, even within the very closely related Meloidogyne incognita group. Our approach forms a robust, low-cost, and scalable method for accurate RKN species diagnostics

    LAP-like non-canonical autophagy and evolution of endocytic vacuoles in pancreatic acinar cells

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    Activation of trypsinogen (formation of trypsin) inside the pancreas is an early pathological event in the development of acute pancreatitis. In our previous studies we identified the activation of trypsinogen within endocytic vacuoles (EVs), cellular organelles that appear in pancreatic acinar cells treated with the inducers of acute pancreatitis. EVs are formed as a result of aberrant compound exocytosis and subsequent internalization of post-exocytic structures. These organelles can be up to 12 μm in diameter and can be actinated (i.e. coated with F-actin). Notably, EVs can undergo intracellular rupture and fusion with the plasma membrane, providing trypsin with access to cytoplasmic and extracellular targets. Unraveling the mechanisms involved in cellular processing of EVs is an interesting cell biological challenge with potential benefits for understanding acute pancreatitis. In this study we have investigated autophagy of EVs and discovered that it involves a non-canonical LC3-conjugation mechanism, reminiscent in its properties to LC3-associated phagocytosis (LAP); in both processes LC3 was recruited to single, outer organellar membranes. Trypsinogen activation peptide was observed in approximately 55% of LC3-coated EVs indicating the relevance of the described process to the early cellular events of acute pancreatitis. We also investigated relationships between actination and non-canonical autophagy of EVs and concluded that these processes represent sequential steps in the evolution of EVs. Our study expands the known roles of LAP and indicates that, in addition to its well-established functions in phagocytosis and macropinocytosis, LAP is also involved in the processing of post-exocytic organelles in exocrine secretory cells. Abbreviations: AP: acute pancreatitis; CCK: cholecystokinin; CLEM: correlative light and electron microscopy; DPI: diphenyleneiodonium; EV: endocytic vacuole; LAP: LC3-associate phagocytosis; MAP1LC3/LC3: microtubule-associated protein 1 light chain 3; PACs: pancreatic acinar cells; PFA: paraformaldehyde; PtdIns3K: phosphatidylinositol 3-kinase; PtdIns3P: phosphatidylinositol 3-phosphate; Res: resveratrol; TAP: trypsinogen activation peptide; TEM: transmission electron microscopy; TLC-S: taurolithocholic acid 3-sulfate; TRD: Dextran Texas Red 3000 MW Neutral; ZGs: zymogen granules

    Acetate as a model for aspartate-based CXCR4 chemokine receptor binding of cobalt and nickel complexes of cross-bridged tetraazamacrocycles

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    A number of disease states including WHIM syndrome, HIV infection and cancer have been linked to the chemokine receptor CXCR4. High-affinity CXCR4 antagonist transition metal complexes of configurationally restricted bis-tetraazamacrocyclic ligands have been identified in previous studies. Recently synthesised and structurally characterised Co2+/Co3+ and Ni2+ acetate complexes of mono-macrocycle cross-bridged ligands have been used to mimic their known coordination interaction with the aspartate side chains on binding to CXCR4. Here, X-ray crystal structures for three Co2+/Co3+ acetate complexes and five Ni2+ acetate complexes are presented and demonstrate flexibility in the mode of binding to the acetate ligand concomitantly with the requisite cis-V-configured cross-bridged tetraazamacrocyle. Complexes of the smaller Co3+ metal ion exclusively bind acetate by chelating both oxygens of acetate. Larger Co2+ and Ni2+ metal ions in cross-bridged tetraazamacrocycles show a clear tendency to coordinate acetate in a monodentate fashion with a coordinated water molecule completing the octahedral coordination sphere. However, in unbridged tetraazamacrocycle acetate structures reported in the literature, the coordination preference is to chelate both acetate oxygens. We conclude that the short ethylene cross-bridge restricts the equatorial bulk of the macrocycle, prompting the metal ion to fill the equator with the larger monodentate acetate plus water ligand set. In unbridged ligand examples, the flexible macrocycle expands equatorially and generally only allows chelation of the sterically smaller acetate alone. These results provide insight for generation of optimised bis-macrocyclic CXCR4 antagonists utilising cobalt and nickel ions

    Integrating ecosystem markets to co-ordinate landscape-scale public benefits from nature

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    Ecosystem markets are proliferating around the world in response to increasing demand for climate change mitigation and provision of other public goods. However, this may lead to perverse outcomes, for example where public funding crowds out private investment or different schemes create trade-offs between the ecosystem services they each target. The integration of ecosystem markets could address some of these issues but to date there have been few attempts to do this, and there is limited understanding of either the opportunities or barriers to such integration. This paper reports on a comparative analysis of eleven ecosystem markets in operation or close to market in Europe, based on qualitative analysis of 25 interviews, scheme documentation and two focus groups. Our results indicate three distinct types of markets operating from the regional to national scale, with different modes of operation, funding and outcomes: regional ecosystem markets, national carbon markets and green finance. The typology provides new insights into the operation of ecosystem markets in practice, which may challenge traditionally held notions of Payment for Ecosystem Services. Regional ecosystem markets, in particular, represent a departure from traditional models, by using a risk-based funding model and aggregating both supply and demand to overcome issues of free-riding, ecosystem service trade-offs and land manager engagement. Central to all types of market were trusted intermediaries, brokers and platforms to aggregate supply and demand, build trust and lower transaction costs. The paper outlines six options for blending public and private funding for the provision of ecosystem services and proposes a framework for integrating national carbon markets and green finance with regional ecosystem markets. Such integration may significantly increase funding for regenerative agriculture and conservation across multiple habitats and services, whilst addressing issues of additionality and ecosystem service trade-offs between multiple schemes

    Rheumatic Conditions as Risk Factors for Self-Harm: A Retrospective Cohort Study

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    Objective To examine the risk of self-harm in rheumatological conditions Methods Retrospective cohort study using data from the Clinical Practice Research Datalink. Patients with ankylosing spondylitis, fibromyalgia, osteoarthritis or rheumatoid arthritis were identified between 1990–2016 and matched to patients without these conditions. Incident self-harm was defined by medical record codes following a rheumatological diagnosis. Incidence rates (per 10,000 person-years(PY)) were reported for each condition, both overall and year-on-year(2000-2016). Cox regression analysis determined risk (hazard ratios(HR), 95% confidence interval(CI)) of self-harm for each rheumatological cohort compared to the matched unexposed cohort. Initial crude analysis was subsequently adjusted and stratified by age and gender. Due to non-proportionality over time, osteoarthritis was also stratified by disease duration(<1 year, =1-<5 years, =5-<10 years, =10 years). Results Incidence of self-harm was highest in patients with fibromyalgia (25.12 (95%CI 22.45,28.11) per 10,000 PY) and lowest for osteoarthritis (6.48 (6.20, 6.76)). There was a crude association with each rheumatological condition and self-harm, except for ankylosing spondylitis. Though attenuated, these associations remained after adjustment for fibromyalgia (HR 2.06(95%CI 1.60,2.65)), rheumatoid arthritis (1.59(1.20,2.11)) and osteoarthritis (1-<5years: 1.12 (1.01,1.24); =5-<10 years: 1.35 (1.18,1.54)). Age and gender were weak effect modifiers for these associations. Conclusions Primary care patients with fibromyalgia, osteoarthritis or rheumatoid arthritis (but not ankylosing spondylitis) are at increased risk of self-harm compared to people without these rheumatological conditions. Clinicians need to be aware of the potential for self-harm in patients with rheumatological conditions (particularly fibromyalgia), explore mood and risk with them, and offer appropriate support and management

    Author Correction:A consensus protocol for functional connectivity analysis in the rat brain

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