Reproductive Structures and Early Life History of the Gulf Toadfish, Opsanus beta, in the Tecolutla Estuary, Veracruz, Mexico

Although the Gulf toadfish, Opsanus beta, is an abundant member of the nearshore Gulf of Mexico ichthyofaunal assemblage, little information exists regarding the ecology of the species, especially for southern Gulf of Mexico populations. We added to the existing knowledge of this species by describing the reproductive structures and examining the early life history of this species in the Tecolutla estuary, Mexico. Macro- and microscopic examination of 7 males showed spermatogenesis to be similar to other teleost species except for the occurrence of biflagellate spermatozoa. Histological examination of the male accessory gland showed 3 tissue layers, but their functions are still undetermined. We found asynchronous development of oocytes in the ovaries of 16 females, which may indicate multiple spawning over the long spawning season noted in this study. Batch fecundity estimates among females ranged from 79 to 518 mature ova with a mean ovum diameter of 3.5 mm. The above-mentioned factors along with large size at hatching, attached larval forms, and paternal care may account, in part, for the abundance of this species in highly dynamic systems

The role of proteomics in progressing insights into plant secondary metabolism

The development of omics has enabled the genome-wide exploration of all kinds of biological processes at the molecular level. Almost every field of plant biology has been analyzed at the genomic, transcriptomic and proteomic level. Here we focus on the particular contribution that proteomic technologies have made in progressing knowledge and characterising plant secondary metabolism (SM) pathways since early expectations were created 15 years ago. We analyzed how three major issues in the proteomic analysis of plant SM have been implemented in various research studies. These issues are: (i) the selection of a suitable plant material rich in secondary metabolites of interest, such as specialized tissues and organs, and in vitro cell cultures; (ii) the proteomic strategy to access target proteins, either a comprehensive or a differential analysis; (iii) the proteomic approach, represented by the hypothesis-free discovery proteomics and the hypothesis-driven targeted proteomics. We also examine to what extent the most-advanced technologies have been incorporated into proteomic research in plant SM and highlight some cutting edge techniques that would strongly benefit the progress made in this field.This work has been supported by grants from the Spanish Ministry of Science and Innovation (BIO2011-29856-C02-02; BIO2014-51861-R), European Funds for Regional Development (FEDER) and Conselleria d’Educacio, Cultura i Sport de la Generalitat Valenciana (FPA/2013/A/074). JM-C acknowledges a postdoctoral and research grants from SENESCYT GOVERNMENT OF ECUADOR (006-IECE-SMG5-GPLR-2012 and Programa1_Senescyt_2014) and a grant from UTEQ (UTEQ-Ambiental-9-FCAmb-IFOR-2014-FOCICYT002)

Associations between olfactory pathway gene methylation marks, obesity features and dietary intakes

Abstract Background Olfaction is an important sense influencing food preferences, appetite, and eating behaviors. This hypothesis-driven study aimed to assess associations between olfactory pathway gene methylation signatures, obesity features, and dietary intakes. Methods A nutriepigenomic analysis was conducted in 474 adults from the Methyl Epigenome Network Association (MENA) project. Anthropometric measurements, clinical data, and serum metabolic profiles of the study population were obtained from structured databases of the MENA cohorts. Habitual dietary intake was assessed using a validated semiquantitative food frequency questionnaire. DNA methylation was measured in circulating white blood cells by microarray (Infinium Human Methylation 450 K BeadChips). FDR values (p < 0.0001) were used to select those CpGs that showed the best correlation with body mass index (BMI) and waist circumference (WC). Pathway analyses involving the characterization of genes involved in the olfactory transduction system were performed using KEGG and pathDIP reference databases. Results Overall, 15 CpG sites at olfactory pathway genes were associated with BMI (p < 0.0001) and WC (p < 0.0001) after adjustments for potential confounding factors. Together, methylation levels at the15 CpG sites accounted for 22% and 20% of the variability in BMI and WC (r 2 = 0.219, p < 0.001, and r 2 = 0.204, p < 0.001, respectively). These genes encompassed olfactory receptors (OR4D2, OR51A7, OR2T34, and OR2Y1) and several downstream signaling molecules (SLC8A1, ANO2, PDE2A, CALML3, GNG7, CALML6, PRKG1, and CAMK2D), which significantly regulated odor detection and signal transduction processes within the complete olfactory cascade, as revealed by pathway enrichment analyses (p = 1.94 × 10–10). Moreover, OR4D2 and OR2Y1 gene methylation patterns strongly correlated with daily intakes of total energy (p < 0.0001), carbohydrates (p < 0.0001), protein (p < 0.0001), and fat (p < 0.0001). Conclusions The results of this study suggest novel relationships between olfactory pathway gene methylation signatures, obesity indices, and dietary intakes

Preandean geological configuration of the eastern North Patagonian Massif, Argentina

The Preandean geological configuration of the eastern North Patagonian Massif is established through the use of geological and geophysical analysis. The positive gravity anomalies located near the Atlantic coast are due to 535 and 540 Ma old rocks belonging to the Pampean Orogeny (Precambrian–middle Cambrian), which are widely recognized in central and northern Argentina. The Famatinian Cycle (Ordovician–Devonian) is represented by a Silurian–Devonian marine basin equivalent to those of eastern-central Argentina and South Africa, and which was deformed at the end of the Devonian by an ∼E–W to WNW–ESE compressional event, part of the Famatinian Orogeny. Containing strong gravity gradients, the NW–SE belt is coincident with fault zones which were originated during the Gondwanide Orogeny. This event also produced NW–SE overthrusting of the Silurian–Devonian sequences and strike-slip faults that displaced blocks in the same direction. This deformation event belongs to the Gondwanide Orogeny that includes movements related to a counterclockwise rotation of blocks in northern Patagonia. The strong negative anomalies located in the western part of the area stem from the presence of rocks of the Jurassic Cañadón Asfalto basin interbedded in the Marifil Complex. These volcaniclastic sequences show mild deformation of accommodation zones in a pre-Jurassic paleorelief.Fil: Gregori, Daniel Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Bahía Blanca. Instituto Geológico del Sur; Argentina. Universidad Nacional del Sur; ArgentinaFil: Kostadinoff, Jose. Universidad Nacional del Sur. Departamento de Física; ArgentinaFil: Alvarez, Guillermina Telma. Universidad Nacional del Sur; ArgentinaFil: Raniolo, Luis Ariel. Universidad Nacional del Sur; ArgentinaFil: Strazzere, Leonardo. Universidad Nacional del Sur. Departamento de Ingeniería; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Bahía Blanca. Instituto Geológico del Sur; ArgentinaFil: Martinez, Juan Cruz. Universidad Nacional del Sur; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Bahía Blanca. Instituto Geológico del Sur; ArgentinaFil: Barros, Mercedes Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Bahía Blanca. Instituto Geológico del Sur; Argentina. Universidad Nacional del Sur; Argentin

Interactive Role of Surrogate Liver Fibrosis Assessment and Insulin Resistance on the Incidence of Major Cardiovascular Events

Introduction: The combination of easy-to-obtain validated biomarkers is interesting in the prognostic evaluation of patients at cardiovascular risk in a precision medicine scenario. The evaluation of the effect modification of insulin resistance and liver fibrosis with the Triglyceride-Glucose index (TyG) and Fibrosis-4 index (FIB4) might provide prognostic information in patients at cardiovascular risk. Patients and methods: A retrospective cohort study was performed with 2055 patients recruited in the Vascular Metabolic CUN cohort. The studied outcome was the incidence rate of major cardiovascular events (MACE). The Systematic Coronary Risk Evaluation (SCORE), FIB4 and TyG indexes were calculated according to validated formulas. Results: FIB4 and TyG showed a synergistic interaction using validated cut-offs for both indexes in the prediction of MACE (Hazard ratio (HR) 1.05 CI95% 1.01–1.08) which remained after adjustment by age, sex, SCORE subgroup, presence of diabetes, or previous MACE using standardized cut-off (HR 2.29 CI95% 1.33–3.94). Finally, a subgroup with significant TyG and FIB4 showed a higher cardiovascular risk in the study population (adjusted HR 3.34 CI 95% 1.94–5.77). Conclusion: The combined interpretation of TyG and FIB4 indexes might have a potential predictive value of major cardiovascular events

CLOCK, PER2 and BMAL1 DNA methylation: association with obesity and metabolic syndrome characteristics and monounsaturated fat intake

The circadian clock system instructs 24-h rhythmicity on gene expression in essentially all cells, including adipocytes, and epigenetic mechanisms may participate in this regulation. The aim of this research was to investigate the influence of obesity and metabolic syndrome (MetS) features in clock gene methylation and the involvement of these epigenetic modifications in the outcomes. Sixty normal-weight, overweight and obese women followed a 16-weeks weight reduction program. DNA methylation levels at different CpG sites of CLOCK, BMAL1 and PER2 genes were analyzed by Sequenom's MassARRAY in white blood cells obtained before the treatment. Statistical differences between normal-weight and overweight + obese subjects were found in the methylation status of different CpG sites of CLOCK (CpGs 1, 5-6, 8 and 11-14) and, with lower statistical significance, in BMAL1 (CpGs 6-7, 8, 15 and 16-17). The methylation pattern of different CpG sites of the three genes showed significant associations with anthropometric parameters such as body mass index and adiposity, and with a MetS score. Moreover, the baseline methylation levels of CLOCK CpG 1 and PER2 CpGs 2-3 and 25 correlated with the magnitude of weight loss. Interestingly, the percentage of methylation of CLOCK CpGs 1 and 8 showed associations with the intake of monounsaturated and polyunsaturated fatty acids. This study demonstrates for the first time an association between methylation status of CpG sites located in clock genes (CLOCK, BMAL1 and PER2) with obesity, MetS and weight loss. Moreover, the methylation status of different CpG sites in CLOCK and PER2 could be used as biomarkers of weight-loss success, particularly CLOCK CPGs 5-6

Biomasa ramoneable procedente de resalveos sobre tallares envejecidos de encina

Los tallares envejecidos de encina ocupan una gran superficie en España, y presentan graves problemas selvícolas, ecológicos y económicos cuya solución podría venir de la aplicación de resalveos de conversión. Dicho tratamiento provoca inevitablemente un rebrote que debe ser controlado, siendo el ganado silvestre o doméstico la principal herramienta para ello. En este trabajo se presentan los resultados obtenidos durante los tres años siguientes tras la aplicación de claras de distinto peso en un tallar envejecido de Guadalajara, en relación con la producción de brotes de suelo. A modo de ejemplo, para un 50% de área basimétrica extraída se producen los siguientes kg de materia seca/ha como media: 132,2 el primer año; 265,1 el segundo año; 437,9 el tercer año. También se ofrecen, para los dos primeros años tras las claras, valores relativos al porcentaje de peso seco de hojas sobre el peso seco total de brotes de suelo: 53,3 % y 60,6 %, respectivamente

Ultrasound/Elastography Techniques, Lipidomic and Blood Markers Compared to Magnetic Resonance Imaging in non-Alcoholic Fatty Liver Disease Adults

Introduction: Non-alcoholic fatty liver disease (NAFLD) may progress to steatohepatitis, cirrhosis and complicated hepatocellular carcinoma with defined differential symptoms and manifestations. Objective: To evaluate the fatty liver status by several validated approaches and to compare imaging techniques, lipidomic and routine blood markers with magnetic resonance imaging in adults subjects with non-alcoholic fatty liver disease. Materials and methods: A total of 127 overweight/obese with NAFLD, were parallelly assessed by Magnetic Resonance Imaging (MRI), ultrasonography, transient elastography and a validated metabolomic designed test to diagnose NAFLD in this cross-sectional study. Body composition (DXA), hepatic related biochemical measurements as well as the Fatty Liver Index (FLI) were evaluated. This study was registered as FLiO: Fatty Liver in Obesity study; NCT03183193. Results: The subjects with more severe liver disease were found to have worse metabolic parameters. Positive associations between MRI with inflammatory and insulin biomarkers were found. A linear regression model including ALT, RBP4 and HOMA-IR was able to explain 40.9% of the variability in fat content by MRI. In ROC analyses a combination panel formed of ALT, HOMA-IR and RBP4 followed by ultrasonography, ALT and metabolomic test showed the major predictive ability (77.3%, 74.6%, 74.3% and 71.1%, respectively) for liver fat content. Conclusions: A panel combination including routine blood markers linked to insulin resistance showed highest associations with MRI considered as a gold standard for determining liver fat content. This combination of tests can facilitate the diagnosis of early stages of non-alcoholic liver disease thereby avoiding other invasive and expensive method

Palaeogenomic insights into the origins of French grapevine diversity

Ramos-Madrigal, Jazmín, Runge, Anne Kathrine Wiborg, Bouby, Laurent, Lacombe, Thierry, Castruita, José Alfredo Samaniego, Adam-Blondon, Anne-Françoise, Figueiral, Isabel, Hallavant, Charlotte, Martínez-Zapater, José M., Schaal, Caroline, Töpfer, Reinhard, Petersen, Bent, Sicheritz-Pontén, Thomas, This, Patrice, Bacilieri, Roberto, Gilbert, M. Thomas P., Wales, Nathan (2019): Palaeogenomic insights into the origins of French grapevine diversity. Nature Plants 5: 595-603, DOI: 10.1038/s41477-019-0437-

Surgical treatment for colorectal cancer: Analysis of the influence of an enhanced recovery programme on long-term oncological outcomes-a study protocol for a prospective, multicentre, observational cohort study

Introduction The evidence currently available from enhanced recovery after surgery (ERAS) programmes concerns their benefits in the immediate postoperative period, but there is still very little evidence as to whether their correct implementation benefits patients in the long term. The working hypothesis here is that, due to the lower response to surgical aggression and lower rates of postoperative complications, ERAS protocols can reduce colorectal cancer-related mortality. The main objective of this study is to analyse the impact of an ERAS programme for colorectal cancer on 5-year survival. As secondary objectives, we propose to analyse the weight of each of the predefined items in the oncological results as well as the quality of life. Methods and analysis A multicentre prospective cohort study was conducted in patients older than 18 years of age who are scheduled to undergo surgery for colorectal cancer. The study involved 12 hospitals with an implemented enhanced recovery protocol according to the guidelines published by the Spanish National Health Service. The intervention group includes patients with a minimum implementation level of 70%, and the control group includes those who fail to reach this level. Compliance will be studied using 18 key performance indicators, and the results will be analysed using cancer survival indicators, including overall survival, cancer-specific survival and relapse-free survival. The time to recurrence, perioperative morbidity and mortality, hospital stay and quality of life will also be studied, the latter using the validated EuroQol Five questionnaire. The propensity index method will be used to create comparable treatment and control groups, and a multivariate regression will be used to study each variable. The Kaplan-Meier estimator will be used to estimate survival and the log-rank test to make comparisons. A p value of less than 0.05 (two-tailed) will be considered to be significant. Ethics and dissemination Ethical approval for this study was obtained from the Aragon Ethical Committee (C.P.-C.I. PI20/086) on 4 March 2020. The findings of this study will be submitted to peer-reviewed journals (BMJ Open, JAMA Surgery, Annals of Surgery, British Journal of Surgery). Abstracts will be submitted to relevant national and international meetings.The present research study was awarded a Ministerio de Ciencia e Innovación health research project grant (PI19/00291) from the Carlos III Institute of the Spanish National Health Service as part of the 2019 call for Strategic Action in Health