Variabilités spatiales et temporelles de la qualité physico-chimique et des invertébrés pélagiques des eaux de la retenue hydroélectrique de Petit Saut (Guyane française).

Le bassin versant du fleuve Sinnamary est situé en Guyane française, au nord du continent sud américain, en zone néo-tropicale. Il s'étend entre 4 et 5°de latitude Nord et entre 52°50' et 53°30' de longitude Ouest. En 1994, la mise en eau du barrage hydroélectrique construit sur le site de Petit Saut occasionne l'ennoiement de 365 km2 de forêt primaire. Le remplissage s'effectue en 18 mois, et la demande en oxygène dissous nécessaire à la dégradation de la matière organique est telle qu'en quelques jours la masse d'eau se stratifie en un épilimnion oxygéné et un hypolimnion anoxique. Représentant quelques centimètres en 1994, l'épilimnion s'épaissit progressivement jusqu'en 1998. Depuis, cette progression s'est nettement ralentie et l'épilimnion oscille autour d'une valeur moyenne de 5 à 6 mètres. Il abrite la plus grande partie du zooplancton pélagique. L'hypolimnion est anoxique et riche en éléments réduits. Le zooplancton s'est rapidement installé avec des rotifères, des cladocères et des copépodes. Des ostracodes et des Chaoboridae y sont désormais associés. La retenue présente une zonation longitudinale, de la tête de la retenue vers la queue, aussi bien en termes de densités que de composition des peuplements. De même, il existe une zonation transversale, notamment marquée par un gradient croissant de la conductivité de l'axe vers les berges. Ces ressources endogènes ainsi que des apports complémentaires (végétaux, invertébrés terrestres, détritus…) sont utilisées par la faune ichtyque qui a su s'adapter au changement du milieu. Le temps de rétention des eaux qui fluctue saisonnièrement en fonction des pluies semble être le facteur prépondérant de variabilité pour la qualité physico-chimique des eaux et les communautés biologiques.The Sinnamary River is located in a neotropical zone, in French Guiana, in the northern part of South America. Its flood basin extends between 4° and 5° N latitude and 52°50' and 53°30' W longitude. The river is found in an equatorial climate, and is influenced by its proximity to the ocean. The temperature varies little, with an average of 25°C for the least hot month (January) and 27°C for the hottest month (October). The humidity is always high and averages more than 90%. The Sinnamary River bed is broad (> 50 m), and runs from south to north for approximately 240 km with a very weak slope (0.0003%). Petit Saut, the site of the hydroelectric dam, is located approximately 60 km from the mouth of the river, with a flood basin area of 5927 km2 and an average flow rate 260 m3 /s.The construction of the hydroelectric dam at Petit Saut in 1994 resulted in the flooding of 365 km2 of primary forest in a neotropical zone (the average depth of the reservoir is 11 m). The dam reservoir was filled over a period of 18 months and the amount of dissolved oxygen necessary for the organic matter to decompose was such that, in a matter of days, the body of water became stratified into an oxygenated epilimnion and an anoxic hypolimnion. Only centimeters thick in 1994, by 1998 the epilimnion had progressively expanded. Since that time it has varied between an average thickness of 5 to 6 m and is home to various biological communities. The hypolimnion is anoxic and rich in reduced compounds (nitrogen and phosphorus minerals, dissolved organic matter, particles, metals and gas). The products of the degradation of the flooded organic matter, which still prevail at the bottom, are gradually relayed towards surface by phenomena of dilution, hydrolysis and oxidation.The river fauna disappeared from the reservoir and was replaced after a few weeks by various pelagic fauna. The zooplanktonic communities, primarily confined to the epilimnion, were quickly settled with rotifera, cladocera and copepoda. Initially dominated by detritivores (Bosminidae) and Cyclopidae from February to May 1994, the settlements diversified with phytophagous zooplankton (Calanidae and Daphniidae) when the phytoplankton developed. This procession was quickly accompanied by Sididae, which has dominated the cladocera since mid-1996 and by ostracoda, which were particularly abundant from 1995 to 1997. Carnivores such as Chaoboridae larvae were also present in Petit Saut reservoir. In contrast to the other zooplankton species, Chaoboridae larvae occupy the entire water column. As a result of great quantities of organic matter available at the time the reservoir was filled, the biomasses were initially large and have gradually decreased with decreasing nutrient concentrations.The reservoir was not homogeneous in terms of zooplankton density, with a longitudinal zonation from the dam towards the upstream tail. In the tail, fauna were identical to those of the river. In the lake zone, phytophagous Calanidae dominated. In the intermediate zone, known as the zone of transition, the zooplankton biomass normalized to the volume of oxygenated water was less important than in the lake zone. Cyclopidae, well represented at the time of the reservoir colonization, dominated the communities in the transition zone. This distribution of zooplankton was likely connected with the dissolved oxygen concentrations, as well as with the quantities of phytoplankton and bacterio-chlorophyll. Similarly, there was a transverse zonation, marked by an increase in conductivity towards the reservoir banks. The density of the communities varied seasonally. The highest biomasses were measured along the central axis at the time of high waters and close to the banks at the time of low waters.The time of water retention, which fluctuates according to the rainy season, seemed to be the factor dominating the physicochemical water quality variability and the biological communities. The rainy season is characterized by the dilution of various elements (e.g., conductivity is reduced). Conversely, during the dry season, the elements concentrate again in the water mass. Nevertheless, the peaks of pelagic invertebrate density were observed during times of high waters, when the hydraulic conditions favour the exchanges between the hypolimnion (anoxic and rich in nutritive elements) and the epilimnion (oxygenated and very low in nutrients).These endogenous resources, as well as complementary contributions (vegetation, invertebrate, terrestrial, refuse), are used by the fish fauna, which adapted to the change in their environment. Predation contributes to the seasonal evolution of the zooplankton. Predation pressure was more important in the dry season than in the rainy season

Comparison of three local frame definitions for the kinematic analysis of the fingers and the wrist

International audienceBecause the hand is a complex poly-articular limb, numerous methods have been proposed to investigate its kinematics therefore complicating the comparison between studies and the methodological choices. With the objective of overcoming such issues, the present study compared the effect of three local frame definitions on local axis orientations and joint angles of the fingers and the wrist. Three local frames were implemented for each segment. The “Reference” frames were aligned with global axes during a static neutral posture. The “Landmark” frames were computed using palpated bony landmarks. The “Functional” frames included a flexion–extension axis estimated during functional movements. These definitions were compared with regard to the deviations between obtained local segment axes and the evolution of joint (Cardan) angles during two test motions. Each definition resulted in specific local frame orientations with deviations of 15° in average for a given local axis. Interestingly, these deviations produced only slight differences (below 7°) regarding flexion–extension Cardan angles indicating that there is no preferred method when only interested in finger flexion–extension movements. In this case, the Reference method was the easiest to implement, but did not provide physiological results for the thumb. Using the Functional frames reduced the kinematic cross-talk on the secondary and tertiary Cardan angles by up to 20° indicating that the Functional definition is useful when investigating complex three-dimensional movements. Globally, the Landmark definition provides valuable results and, contrary to the other definitions, is applicable for finger deformities or compromised joint rotations

The impact of hand proportions on tool grip abilities in humans, great apes and fossil hominins: a biomechanical analysis using musculoskeletal simulation

Differences in grip techniques used across primates are usually attributed to variation in thumb-finger proportions and muscular anatomy of the hand. However, this cause-effect relationship is not fully understood because little is known about the biomechanical functioning and mechanical loads (e.g., muscle or joint forces) of the non-human primate hand compared to that of humans during object manipulation. This study aims to understand the importance of hand proportions on the use of different grip strategies used by humans, extant great apes (bonobos, gorillas and orangutans) and, potentially, fossil hominins (Homo naledi and Australopithecus sediba) using a musculoskeletal model of the hand. Results show that certain grips are more challenging for some species, particularly orangutans, than others, such that they require stronger muscle forces for a given range of motion. Assuming a human-like range of motion at each hand joint, simulation results show that H. naledi and A. sediba had the biomechanical potential to use the grip techniques considered important for stone tool-related behaviors in humans. These musculoskeletal simulation results shed light on the functional consequences of the different hand proportions among extant and extinct hominids and the different manipulative abilities found in humans and great apes

The impact of hand proportions on tool grip abilities in humans, great apes and fossil hominins: a biomechanical analysis using musculoskeletal simulation

Differences in grip techniques used across primates are usually attributed to variation in thumb-finger proportions and muscular anatomy of the hand. However, this cause-effect relationship is not fully understood because little is known about the biomechanical functioning and mechanical loads (e.g., muscle or joint forces) of the non-human primate hand compared to that of humans during object manipulation. This study aims to understand the importance of hand proportions on the use of different grip strategies used by humans, extant great apes (bonobos, gorillas and orangutans) and, potentially, fossil hominins (Homo naledi and Australopithecus sediba) using a musculoskeletal model of the hand. Results show that certain grips are more challenging for some species, particularly orangutans, than others, such that they require stronger muscle forces for a given range of motion. Assuming a human-like range of motion at each hand joint, simulation results show that H. naledi and A. sediba had the biomechanical potential to use the grip techniques considered important for stone tool-related behaviors in humans. These musculoskeletal simulation results shed light on the functional consequences of the different hand proportions among extant and extinct hominids and the different manipulative abilities found in humans and great apes

Measurements of hydrogen cyanide (HCN) and acetylene (C2H2) from the Infrared Atmospheric Sounding Interferometer (IASI)

Hydrogen cyanide (HCN) and acetylene (C2H2) are ubiquitous atmospheric trace gases with medium lifetime, which are frequently used as indicators of combustion sources and as tracers for atmospheric transport and chemistry. Because of their weak infrared absorption, overlapped by the CO2 Q branch near 720 cm−1, nadir sounders have up to now failed to measure these gases routinely. Taking into account CO2 line mixing, we provide for the first time extensive measurements of HCN and C2H2 total columns at Reunion Island (21° S, 55° E) and Jungfraujoch (46° N, 8° E) in 2009–2010 using observations from the Infrared Atmospheric Sounding Interferometer (IASI). A first order comparison with local ground-based Fourier transform InfraRed (FTIR) measurements has been carried out allowing tests of seasonal consistency which is reasonably captured, except for HCN at Jungfraujoch. The IASI data shows a greater tendency to high C2H2 values. We also examine a nonspecific biomass burning plume over austral Africa and show that the emission ratios with respect to CO agree with previously reported values

Modelling dependency networks to inform data structures in BIM and smart cities

The pervasive deployment of "smart city" and "smart building" projects in cities world-wide is driving innovation on many fronts including; technology, telematics, engineering and entrepreneurship. This paper focuses on the technical and engineering perspectives of BIM and smart cities, by extending building and urban morphology studies as to respond to the challenges posed by Big Data, and smart infrastructure. The proposed framework incorporates theoretical and modelling descriptions to verify how network-based models can act as the backbone skeletal representation of both building and urban complexity, and yet relate to environmental performance and smart infrastructure. The paper provides some empirical basis to support data information models through building dependency networks as to represent the relationships between different existing and smart infrastructure components. These dependency networks are thought to inform decisions on how to represent building and urban data sets in response to different social and environmental performance requirements, feeding that into void and solid descriptions of data maturity models. It is concluded that network-based models are fundamental to comprehend and represent the complexity of cities and inform urban design and public policy practices, in the design and operation phases of infrastructure projects

Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation.

Teleost fishes, thanks to their rapid evolution of sex determination mechanisms, provide remarkable opportunities to study the formation of sex chromosomes and the mechanisms driving the birth of new master sex determining (MSD) genes. However, the evolutionary interplay between the sex chromosomes and the MSD genes they harbor is rather unexplored. We characterized a male-specific duplicate of the anti-Müllerian hormone (amh) as the MSD gene in Northern Pike (Esox lucius), using genomic and expression evidence as well as by loss-of-function and gain-of-function experiments. Using RAD-Sequencing from a family panel, we identified Linkage Group (LG) 24 as the sex chromosome and positioned the sex locus in its sub-telomeric region. Furthermore, we demonstrated that this MSD originated from an ancient duplication of the autosomal amh gene, which was subsequently translocated to LG24. Using sex-specific pooled genome sequencing and a new male genome sequence assembled using Nanopore long reads, we also characterized the differentiation of the X and Y chromosomes, revealing a small male-specific insertion containing the MSD gene and a limited region with reduced recombination. Our study reveals an unexpectedly low level of differentiation between a pair of sex chromosomes harboring an old MSD gene in a wild teleost fish population, and highlights both the pivotal role of genes from the amh pathway in sex determination, as well as the importance of gene duplication as a mechanism driving the turnover of sex chromosomes in this clade

Acetylene (C2H2) and hydrogen cyanide (HCN) from IASI satellite observations: Global distributions, validation, and comparison with model

We present global distributions of C$_{2}$H$_{2}$ and hydrogen cyanide (HCN) total columns derived from the Infrared Atmospheric Sounding Interferometer (IASI) for the years 2008–2010. These distributions are obtained with a fast method allowing to retrieve C$_{2}$H$_{2}$ abundance globally with a 5% precision and HCN abundance in the tropical (subtropical) belt with a 10% (25 %) precision. IASI data are compared for validation purposes with ground-based Fourier transform infrared (FTIR) spectrometer measurements at four selected stations.We show that there is an overall agreement between the ground-based and space measurements with correlation coefficients for daily mean measurements ranging from 0.28 to 0.81, depending on the site. Global C$_{2}$H$_{2}$ and subtropical HCN abundances retrieved from IASI spectra show the expected seasonality linked to variations in the anthropogenic emissions and seasonal biomass burning activity, as well as exceptional events, and are in good agreement with previous spaceborne studies. Total columns simulated by the Model for Ozone and Related Chemical Tracers, version 4 (MOZART-4) are compared to the ground-based FTIR measurements at the four selected stations. The model is able to capture the seasonality in the two species in most of the cases, with correlation coefficients for daily mean measurements ranging from 0.50 to 0.86, depending on the site. IASI measurements are also compared to the distributions from MOZART-4. Seasonal cycles observed from satellite data are reasonably well reproduced by the model with correlation coefficients ranging from -0.31 to 0.93 for C$_{2}$H$_{2}$ daily means, and from 0.09 to 0.86 for HCN daily means, depending on the considered region. However, the anthropogenic (biomass burning) emissions used in the model seem to be overestimated (underestimated), and a negative global mean bias of 1% (16 %) of the model relative to the satellite observations was found for C$_{2}$H$_{2}$ (HCN)