Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis

Indexación: Scopus.Teleosts exhibit a broad divergence in their adaptive response to stress, depending on the magnitude, duration, and frequency of stressors and the species receiving the stimulus. We have previously reported that the red cusk-eel (Genypterus chilensis), an important marine farmed fish, shows a physiological response to stress that results in increased skeletal muscle atrophy mediated by over-expression of components of the ubiquitin proteasome and autophagy-lysosomal systems. To better understand the systemic effects of stress on the red cusk-eel metabolism, the present study assessed the transcriptomic hepatic response to repetitive handling-stress. Using high-Throughput RNA-seq, 259 up-regulated transcripts were found, mostly associated with angiogenesis, gluconeogenesis, and triacylglyceride catabolism. Conversely, 293 transcripts were down-regulated, associated to cholesterol biosynthesis, PPARα signaling, fatty acid biosynthesis, and glycolysis. This gene signature was concordant with hepatic metabolite levels and hepatic oxidative damage. Moreover, the increased plasmatic levels of AST (aspartate aminotransferase), ALT (alanine aminotransferase) and AP (alkaline phosphatase), as well as liver histology suggest stress-induced liver steatosis. This study offers an integrative molecular and biochemical analysis of the hepatic response to handling-stress, and reveals unknown aspects of lipid metabolism in a non-model teleost.http://journals.plos.org/plosone/article?id=10.1371/journal.pone.017644

Analysis of rolling contact spall life in 440 C steel bearing rims

The results of a two year study of the mechanisms of spall failure in the HPOTP bearings are described. The objective was to build a foundation for detailed analyses of the contact life in terms of: cyclic plasticity, contact mechanics, spall nucleation, and spall growth. Since the laboratory rolling contact testing is carried out in the 3 ball/rod contact fatigue testing machine, the analysis of the contacts and contact lives produced in this machine received attention. The results from the experimentally observed growth lives are compared with calculated predictions derived from the fracture mechanics calculations

Jasmonic acid regulation of the anti-herbivory mechanism conferred by fungal endophytes in grasses

The most studied mechanism of protection against herbivores in grasses associated with Epichloë fungal endophytes has been the fungal production of alkaloids. However, the contribution of the plant immune response on the level of resistance to herbivores in symbiotic grasses has been poorly explored. We studied the relationship between the plant hormone, jasmonic acid (JA) and Epichloë fungal endophytes on herbivore defences in symbiotic grasses. We hypothesized that an exogenous application of methyl jasmonate (MeJA), an activator of the plant JA defence response, would increase the level of resistance of endophyte-symbiotic and non-symbiotic plants to a chewing insect. As Epichloë endophytes produce alkaloids, an enhancement of the JA defence would complement the resistance given by these alkaloids. Lolium multiflorum plants symbiotic and non-symbiotic with the endophyte Epichloë occultans were subjected to an exogenous application of MeJA followed by a challenge with the generalist chewing insect Spodoptera frugiperda. We measured the level of plant resistance to chewing insects, and the defences conferred by host plants and fungal endophytes. Symbiotic plants were more resistant to S. frugiperda than their non-symbiotic counterparts. However, despite the fact that the concentration of JA significantly increased in all plants exposure to MeJA, neither endophyte-symbiotic nor non-symbiotic plants showed an enhanced resistance to insects. Unexpectedly, the exposure of endophyte-symbiotic plants to MeJA led to a reduction in the concentration of loline alkaloids (i.e. N-formyllolines and N-acetylnorlolines), consequently decreasing the level of plant resistance to the herbivore. Synthesis. Our results suggest that, rather than complementing the alkaloid-based defence, the jasmonic acid hormone weakens the anti-herbivore mechanism conferred by Epichloë endophytes. The present study highlights that the interaction between the jasmonic acid hormone and the presence of leaf fungal endophytes can be of importance for the effectiveness of the anti-herbivore defences of symbiotic plants.Fil: Bastias Campos, Daniel. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; ArgentinaFil: Martinez-Ghersa, Maria Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; ArgentinaFil: Newman, Jonathan A.. University of Guelph; CanadáFil: Card, Stuart D.. AgResearch; Nueva ZelandaFil: Mace, Wade J.. AgResearch; Nueva ZelandaFil: Gundel, Pedro Emilio. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; Argentin

Sipha maydis sensitivity to defences of Lolium multiflorum and its endophytic fungus Epichloë occultans

Background. Plants possess a sophisticated immune system to defend from herbivores. These defence responses are regulated by plant hormones including salicylic acid (SA) and jasmonic acid (JA). Sometimes, plant defences can be complemented by the presence of symbiotic microorganisms. A remarkable example of this are grasses establishing symbiotic associations with Epichloë fungal endophytes. We studied the level of resistance provided by the grass’ defence hormones, and that provided by Epichloë fungal endophytes, against an introduced herbivore aphid. These fungi protect their hosts against herbivores by producing bioactive alkaloids. We hypothesized that either the presence of fungal endophytes or the induction of the plant salicylic acid (SA) defence pathway would enhance the level of resistance of the grass to the aphid. Methods. Lolium multiflorum plants, with and without the fungal endophyte Epichloë occultans, were subjected to an exogenous application of SA followed by a challenge with the aphid, Sipha maydis. Results. Our results indicate that neither the presence of E. occultans nor the induction of the plant’s SA pathway regulate S. maydis populations. However, endophytesymbiotic plants may have been more tolerant to the aphid feeding because these plants produced more aboveground biomass. We suggest that this insect insensitivity could be explained by a combination between the ineffectiveness of the specific alkaloids produced by E. occultans in controlling S. maydis aphids and the capacity of this herbivore to deal with hormone-dependent defences of L. multiflorum.Fil: Bastias, Daniel. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; Argentina. Grasslands Research Centre; Nueva ZelandaFil: Martinez-Ghersa, Maria Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; ArgentinaFil: Newman, Jonathan A.. Wilfrid Laurier University; CanadáFil: Card, Stuart D.. Grasslands Research Centre; Nueva ZelandaFil: Mace, Wade J.. Grasslands Research Centre; Nueva ZelandaFil: Gundel, Pedro Emilio. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura. Universidad de Buenos Aires. Facultad de Agronomía. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; Argentin

Intraspecific leaf trait variability along a boreal-to-tropical community diversity gradient

Disentangling the mechanisms that shape community assembly across diversity gradients is a central matter in ecology. While many studies have explored community assembly through species average trait values, there is a growing understanding that intraspecific trait variation (ITV) can also play a critical role in species coexistence. Classic biodiversity theory hypothesizes that higher diversity at species-rich sites can arise from narrower niches relative to species-poor sites, which would be reflected in reduced ITV as species richness increases. To explore how ITV in woody plant communities changes with species richness, we compiled leaf trait data (leaf size and specific leaf area) in a total of 521 woody plant species from 21 forest communities that differed dramatically in species richness, ranging from boreal to tropical rainforests. At each forest, we assessed ITV as an estimate of species niche breadth and we quantified the degree of trait overlap among co-occurring species as a measure of species functional similarity. We found ITV was relatively invariant across the species richness gradient. In addition, we found that species functional similarity increased with diversity. Contrary to the expectation from classic biodiversity theory, our results rather suggest that neutral processes or equalizing mechanisms can be acting as potential drivers shaping community assembly in hyperdiverse forests.Leaf data used to come to this manuscript resulted from many different studies involving different funding sources: European Union Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 265171; Spanish-funded project REMEDINAL3eCM (S2013/MAE-2719); Ecometas excellence network (CGL2014-53840-REDT); a FPU grant by the Spanish Government (AP2010-5600); a Marie Curie IEF fellowship (FP7-PEOPLE-2011-IEF. no. 302445);Peer Reviewe

Evolution of an accretionary complex (LeMay Group) and terrane translation in the Antarctic Peninsula

The LeMay Group accretionary complex of Alexander Island (Antarctic Peninsula) comprises a 4 km thick succession of variably deformed turbidites associated with thrust slices of ocean floor basalts. The depositional age and provenance of the succession is uncertain with estimates ranging from Carboniferous to Cretaceous. The accretion history is also poorly established and whether the LeMay Group developed allochthonously and accreted during an episode of Cretaceous terrane translation. We have examined the geochronology and geochemistry of twenty-two samples from across the entire accretionary complex to determine its depositional, provenance and accretion history. The accretionary complex has been subdivided into four separate groups based on detrital zircon U-Pb age and Lu-Hf provenance analysis. Groups 1 and 2 are interpreted to be a continuation of the extensive Permian accretionary complexes of West Gondwana and have a depositional age of c. 255 Ma, with volcaniclastic input from the extensive silicic volcanism of the Choiyoi Province. Accretion of the LeMay Group to the continental margin developed during the mid-Triassic, potentially related to the Peninsula Orogeny and an episode of flat-slab subduction of the proto-Pacific plate. Group 3 is only identified from an island to the west of Alexander Island and has a mid-Cretaceous depositional age and provenance akin to offshore sequences from Thurston Island. A para-autochthonous origin is suggested, with mid-Cretaceous accretion associated with the melange belts of central Alexander Island. Group 4 is also a distinct unit with an Early Jurassic depositional age and a source more closely related to the Antarctic Peninsula

Palaeozoic – Early Mesozoic geological history of the Antarctic Peninsula and correlations with Patagonia: Kinematic reconstructions of the proto-Pacific margin of Gondwana

The Antarctic Peninsula preserves geological evidence of a long-lived continental margin with intrusive, volcaniclastic and accretionary complexes indicating a convergent margin setting from at least the Cambrian to the Cenozoic. We examine the poorly understood units and successions from the Palaeozoic to the Early Mesozoic and develop detailed kinematic reconstructions for this section of the margin. We use existing geochronology, along with newly presented Usingle bondPb detrital zircon geochronology, combined with detailed field evidence to develop correlations between geological units and tectonic events across Patagonia and the proto-Antarctic Peninsula. The continental margin of Gondwana/Pangea was a convergent margin setting punctuated by crustal block translation, deformation, magmatic pulses (flare-ups) and development of thick accretionary complexes. These events are strongly linked to subducting slab dynamics and a para-autochthonous model is proposed for the long-lived margin. Major magmatic pulses are evident during the Ordovician (Famatinian) and Permian, and the magmatic record is reflected in the detrital zircon age profiles of metasedimentary successions of the northern Antarctic Peninsula and Tierra del Fuego. Major tectonic events during the Carboniferous – Permian (Gondwanide Orogeny) and Triassic (Chonide Event – Peninsula Orogeny) are recognised across the Antarctic Peninsula – Patagonia and are correlated to potential terrane suturing and flat slab dynamics. Our kinematic reconstructions developed in GPlates, combined with geological field relationships have allowed us to model the locus of magmatism relative to the active margin and also the likely source for thick sedimentary successions

Developing a TRIZ-based Design for Flexibility Tool for Manufacturing Facilities

As manufacturers evaluate assets and long-term production plans, they struggle with how best to meet complex building requirements that maximize building flexibility and minimize costs. Research shows that manufacturers highly prioritize facility flexibility. However, infusing flexibility into facility design can be complex and achieving it can be costly. These issues could be mitigated with a dedicated tool for addressing flexibility in facility design. TRIZ (Theory of Inventive Problem Solving) is a problem-solving method that exploits information contained in millions of patents to identify solution genres and standard contradictions to drive inventive design principles. This userfriendly, decision support tool can efficiently reduce the complexity of incorporating flexibility into manufacturing facility design. Using this tool as a platform and incorporating information from fifteen case studies, constructionspecific terms were mapped to TRIZ parameters and principles to create a construction industry specific TRIZ contradiction matrix. This paper describes basic TRIZ theory and previous uses in the construction industry. It then discusses industry input and case studies that helped make it construction-specific. Finally, it addresses the modified TRIZ tool’s potential benefits to the construction industry regarding flexibility considerations

The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

The dataset presented here was collected by the GenTree project (EU-Horizon 2020), which aims to improve the use of forest genetic resources across Europe by better understanding how trees adapt to their local environment. This dataset of individual tree-core characteristics including ring-width series and whole-core wood density was collected for seven ecologically and economically important European tree species: silver birch (Betula pendula), European beech (Fagus sylvatica), Norway spruce (Picea abies), European black poplar (Populus nigra), maritime pine (Pinus pinaster), Scots pine (Pinus sylvestris), and sessile oak (Quercus petraea). Tree-ring width measurements were obtained from 3600 trees in 142 populations and whole-core wood density was measured for 3098 trees in 125 populations. This dataset covers most of the geographical and climatic range occupied by the selected species. The potential use of it will be highly valuable for assessing ecological and evolutionary responses to environmental conditions as well as for model development and parameterization, to predict adaptability under climate change scenarios