26 research outputs found
Game, Set, and Conflict: Evaluating Conflict and Game Frames in Indian Election News Coverage
News frames refer to how journalists organize and present information to
convey a particular message or perspective to their readers. When covering
elections, these frames shape how the public perceives electoral issues and
events. This study examines how news frames, especially conflict and game
frames, were employed by news organizations in India to cover the 2014 and 2019
general elections. We analyzed how the frames varied temporally, by region, and
by the party being featured in the articles. Key findings include (i) conflict
and games frames are employed more often in highly electorally consequential
states (higher legislative seats) than in other states (ii) articles featuring
challenger parties are more likely to have conflict and game frame articles
than those featuring incumbent parties (iii) the national parties (BJP,
Bharatiya Janata Party) and (INC, Indian National Congress) disproportionately
feature in articles having conflict frames. Overall, our analysis highlights
the evolving nature of election campaigns and how conflict and game frames play
a major part in them.Comment: ICWS
Heat Energy Recovery Using Thermo Electric Generator
Internal combustion Engines converts only a small portion of heat energy into useful work resulting in a very low thermal efficiency. Most of the heat energy is lost in forms of cooling, exhaust gas, friction and unaccounted losses. Though energy lost in exhaust gas can be recovered by using thermoelectric generators (TEGs, also known as peltier element), which converts heat into electrical energy. A model has been prepared which helps TEG to extract heat from exhaust gas efficiently. This electrical energy obtained is used for powering hybrid drive
Genome-enabled insights into the biology of thrips as crop pests
Background
The western flower thrips, Frankliniella occidentalis (Pergande), is a globally invasive pest and plant virus vector on a wide array of food, fiber, and ornamental crops. The underlying genetic mechanisms of the processes governing thrips pest and vector biology, feeding behaviors, ecology, and insecticide resistance are largely unknown. To address this gap, we present the F. occidentalis draft genome assembly and official gene set.
Results
We report on the first genome sequence for any member of the insect order Thysanoptera. Benchmarking Universal Single-Copy Ortholog (BUSCO) assessments of the genome assembly (size = 415.8 Mb, scaffold N50 = 948.9 kb) revealed a relatively complete and well-annotated assembly in comparison to other insect genomes. The genome is unusually GC-rich (50%) compared to other insect genomes to date. The official gene set (OGS v1.0) contains 16,859 genes, of which ~ 10% were manually verified and corrected by our consortium. We focused on manual annotation, phylogenetic, and expression evidence analyses for gene sets centered on primary themes in the life histories and activities of plant-colonizing insects. Highlights include the following: (1) divergent clades and large expansions in genes associated with environmental sensing (chemosensory receptors) and detoxification (CYP4, CYP6, and CCE enzymes) of substances encountered in agricultural environments; (2) a comprehensive set of salivary gland genes supported by enriched expression; (3) apparent absence of members of the IMD innate immune defense pathway; and (4) developmental- and sex-specific expression analyses of genes associated with progression from larvae to adulthood through neometaboly, a distinct form of maturation differing from either incomplete or complete metamorphosis in the Insecta.
Conclusions
Analysis of the F. occidentalis genome offers insights into the polyphagous behavior of this insect pest that finds, colonizes, and survives on a widely diverse array of plants. The genomic resources presented here enable a more complete analysis of insect evolution and biology, providing a missing taxon for contemporary insect genomics-based analyses. Our study also offers a genomic benchmark for molecular and evolutionary investigations of other Thysanoptera species
Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest
Background
Halyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species’ feeding and habitat traits, defining potential targets for pest management strategies.
Results
Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys’ capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications.
Conclusions
Availability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls
The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water.
BACKGROUND: Having conquered water surfaces worldwide, the semi-aquatic bugs occupy ponds, streams, lakes, mangroves, and even open oceans. The diversity of this group has inspired a range of scientific studies from ecology and evolution to developmental genetics and hydrodynamics of fluid locomotion. However, the lack of a representative water strider genome hinders our ability to more thoroughly investigate the molecular mechanisms underlying the processes of adaptation and diversification within this group. RESULTS: Here we report the sequencing and manual annotation of the Gerris buenoi (G. buenoi) genome; the first water strider genome to be sequenced thus far. The size of the G. buenoi genome is approximately 1,000 Mb, and this sequencing effort has recovered 20,949 predicted protein-coding genes. Manual annotation uncovered a number of local (tandem and proximal) gene duplications and expansions of gene families known for their importance in a variety of processes associated with morphological and physiological adaptations to a water surface lifestyle. These expansions may affect key processes associated with growth, vision, desiccation resistance, detoxification, olfaction and epigenetic regulation. Strikingly, the G. buenoi genome contains three insulin receptors, suggesting key changes in the rewiring and function of the insulin pathway. Other genomic changes affecting with opsin genes may be associated with wavelength sensitivity shifts in opsins, which is likely to be key in facilitating specific adaptations in vision for diverse water habitats. CONCLUSIONS: Our findings suggest that local gene duplications might have played an important role during the evolution of water striders. Along with these findings, the sequencing of the G. buenoi genome now provides us the opportunity to pursue exciting research opportunities to further understand the genomic underpinnings of traits associated with the extreme body plan and life history of water striders
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The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water
Background: Having conquered water surfaces worldwide, the semi-aquatic bugs occupy ponds, streams, lakes, mangroves, and even open oceans. The diversity of this group has inspired a range of scientific studies from ecology and evolution to developmental genetics and hydrodynamics of fluid locomotion. However, the lack of a representative water strider genome hinders our ability to more thoroughly investigate the molecular mechanisms underlying the processes of adaptation and diversification within this group.
Results: Here we report the sequencing and manual annotation of the Gerris buenoi (G. buenoi) genome; the first water strider genome to be sequenced thus far. The size of the G. buenoi genome is approximately 1,000Mb, and this sequencing effort has recovered 20,949 predicted protein-coding genes. Manual annotation uncovered a number of local (tandem and proximal) gene duplications and expansions of gene families known for their importance in a variety of processes associated with morphological and physiological adaptations to a water surface lifestyle. These expansions may affect key processes associated with growth, vision, desiccation resistance, detoxification, olfaction and epigenetic regulation. Strikingly, the G. buenoi genome contains three insulin receptors, suggesting key changes in the rewiring and function of the insulin pathway. Other genomic changes affecting with opsin genes may be associated with wavelength sensitivity shifts in opsins, which is likely to be key in facilitating specific adaptations in vision for diverse water habitats.
Conclusions: Our findings suggest that local gene duplications might have played an important role during the evolution of water striders. Along with these findings, the sequencing of the G. buenoi genome now provides us the opportunity to pursue exciting research opportunities to further understand the genomic underpinnings of traits associated with the extreme body plan and life history of water striders
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome.
BACKGROUND: The Hemiptera (aphids, cicadas, and true bugs) are a key insect order, with high diversity for feeding ecology and excellent experimental tractability for molecular genetics. Building upon recent sequencing of hemipteran pests such as phloem-feeding aphids and blood-feeding bed bugs, we present the genome sequence and comparative analyses centered on the milkweed bug Oncopeltus fasciatus, a seed feeder of the family Lygaeidae. RESULTS: The 926-Mb Oncopeltus genome is well represented by the current assembly and official gene set. We use our genomic and RNA-seq data not only to characterize the protein-coding gene repertoire and perform isoform-specific RNAi, but also to elucidate patterns of molecular evolution and physiology. We find ongoing, lineage-specific expansion and diversification of repressive C2H2 zinc finger proteins. The discovery of intron gain and turnover specific to the Hemiptera also prompted the evaluation of lineage and genome size as predictors of gene structure evolution. Furthermore, we identify enzymatic gains and losses that correlate with feeding biology, particularly for reductions associated with derived, fluid nutrition feeding. CONCLUSIONS: With the milkweed bug, we now have a critical mass of sequenced species for a hemimetabolous insect order and close outgroup to the Holometabola, substantially improving the diversity of insect genomics. We thereby define commonalities among the Hemiptera and delve into how hemipteran genomes reflect distinct feeding ecologies. Given Oncopeltus's strength as an experimental model, these new sequence resources bolster the foundation for molecular research and highlight technical considerations for the analysis of medium-sized invertebrate genomes
Multiplatform Analysis of 12 Cancer Types Reveals Molecular Classification within and across Tissues of Origin
Recent genomic analyses of pathologically-defined tumor types identify “within-a-tissue” disease subtypes. However, the extent to which genomic signatures are shared across tissues is still unclear. We performed an integrative analysis using five genome-wide platforms and one proteomic platform on 3,527 specimens from 12 cancer types, revealing a unified classification into 11 major subtypes. Five subtypes were nearly identical to their tissue-of-origin counterparts, but several distinct cancer types were found to converge into common subtypes. Lung squamous, head & neck, and a subset of bladder cancers coalesced into one subtype typified by TP53 alterations, TP63 amplifications, and high expression of immune and proliferation pathway genes. Of note, bladder cancers split into three pan-cancer subtypes. The multi-platform classification, while correlated with tissue-of-origin, provides independent information for predicting clinical outcomes. All datasets are available for data-mining from a unified resource to support further biological discoveries and insights into novel therapeutic strategies
A NOVEL FEATURE EXPANSION ALGORITHM FOR NONRIGID CT/MRI BRAIN IMAGE REGISTRATION
Image registration is one of the challenging tasks in medical image analysis. While coming to non rigid image registration there are mainly two issues to consider. They are i) intensity similarity and ii) gray level transformation. The issue with intensity similarity is it is not necessarily equivalent to anatomical similarity when the anatomical correspondences between source and target images are established. Another issue is choosing an appropriate registration algorithm. It should be robust against monotonic gray-level transformation when aligning anatomical structures in the presence of bias fields. Here new feature- intensity based registration method developed for nonrigid brain image registration to overcome the above stated issues named as Anatomical Region Descriptor (ARD). This method is developed on image feature, it encodes geometric properties of anatomical structures and pixel wise interaction details. It is efficient and theoretically monotonic gray level transformation invariant. This method is integrated with intensity based registration algorithm named as residual complexity for Registration purpose. This proposed method is compared with three other non rigid image registration algorithms. Experimental results of the proposed method show that it achieves the highest accuracy rate among the compared methods
Exploring the pattern of antibiotic prescription by dentists: A questionnaire-based study
Introduction: Antibiotic overuse and misuse among dentists was found to be substantial. Exploration of scientific literature revealed very limited studies in India assessing the antibiotic prescription pattern among dentists. Antibiotics are one among the most commonly prescribed drugs by dentists for prophylactic and therapeutic management of oro-dental infections. Increasing inappropriate use of antibiotics has helped the bacteria to armor themselves and develop “Antibiotic Resistance.” Antibiotic resistance is an emerging global menace haunting all fields of the medical fraternity. All dentists should have to take moral responsibility to minimize and wisely use antibiotics.
Aim: To know the prescription pattern of antibiotics for various dental procedures by dental practitioners.
Objective: For treating in a better way to prevent antibiotic resistance.
Materials and Methods: A self-administered, 12-item close-ended questionnaire was used. Questionnaire consisted of questions pertaining to knowledge, attitude, and practice of dental health care professionals before prescribing antibiotics. Associations were found out via the Chi-square test with P value kept as P ≤ 0.05.
Results: With a response rate of 69.76%, medical representatives, patients' preference, fear of losing patients, and fear of spread of infections can potentially “influence” a dentist's capability to prescribe antibiotics.
Conclusion: The dental profession as a whole needs to acquire a deeper understanding of the global effects of superfluous antibiotic prescription. Antibiotics, when judiciously used, are precise life-saving drugs. Proper knowledge about the prescription of antibiotics is the need of the hour. As a nation, we must respond to this growing problem so that antibiotics misuse can be stopped