123 research outputs found
Morphological priming without semantic relationship in Hebrew spoken word recognition
We report on an auditory masked priming study designed to test the contributions of semantics and morphology to spoken word recognition in Hebrew. Thirty-one native Hebrew speakers judged the lexicality of Hebrew words that were primed by words which either share their root morpheme and a transparent semantic relationship with the target (e.g. poreʦ פּורץ ‘burglar’ priming priʦa פּריצה ‘burglary’) or share their root morpheme but lack a transparent semantic relationship with the target (e.g. mifraʦ מפרץ ‘gulf’ priming priʦa פּריצה ‘burglary’). We found facilitatory priming by both types of morphological relatives, supporting that semantic overlap is not required for morphological priming in Hebrew spoken word recognition. Thus, our results extend the findings of Frost, Forster, & Deutsch’s (1997) Experiment 5 to the auditory modality, while avoiding confounds between root priming and Hebrew’s abjad orthography associated with the visual masked priming paradigm. Further, our results are inconsistent with models of word processing which treat morphological priming as reflecting form and semantic coactivation, and instead support an independent role for root morphology in Hebrew lexical processing
Camera Traps Confirm the Presence of the White-naped Mangabey Cercocebus lunulatus in Cape Three Points Forest Reserve, Western Ghana
The white-naped mangabey Cercocebus lunulatus is severely threatened by logging, mining, and hunting. In the last decade, wild populations have been confirmed in just three forested areas in Ghana and a handful of sites in neighboring Côte d’Ivoire and Burkina Faso. Sightings of this species were recently reported in a fourth area in Ghana, the Cape Three Points Forest Reserve, a forest patch in western Ghana, 60 km from the nearest recorded wild population, which is in the Ankasa Conservation Area. We deployed 14 camera traps across 21 different locations throughout the reserve, with the intention of confirming the presence of this species. Images of the white-naped mangabey were captured at four locations, consolidating recent evidence for a fourth sub-population of this species in Ghana and providing only the second-ever photograph of a wild member of this species in the country. We observed evidence of numerous illegal anthropogenic activities in the reserve, which threaten these mangabeys, and we make recommendations for the protection of the reserve, essential for the conservation of this highly endangered species
The role of emerging elites in the formation and development of communities after the fall of the Roman Empire
Elites played a pivotal role in the formation of post-Roman Europe on both macro- and microlevels during the Early Medieval period. History and archaeology have long focused on their description and identification based on written sources or through their archaeological record. We provide a different perspective on this topic by integrating paleogenomic, archaeological, and isotopic data to gain insights into the role of one such elite group in a Langobard period community near Collegno, Italy dated to the 6-8th centuries CE. Our analysis of 28 newly sequenced genomes together with 24 previously published ones combined with isotope (Sr, C, N) measurements revealed that this community was established by and organized around a network of biologically and socially related individuals likely composed of multiple elite families that over time developed into a single extended pedigree. The community also included individuals with diverse genetic ancestries, maintaining its diversity by integrating newcomers and groups in later stages of its existence. This study highlights how shifts in political power and migration impacted the formation and development of a small rural community within a key region of the former Western Roman Empire after its dissolution and the emergence of a new kingdom. Furthermore, it suggests that Early Medieval elites had the capacity to incorporate individuals from varied backgrounds and that these elites were the result of (political) agency rather than belonging to biologically homogeneous groups
From scrap metal to highly efficient electrodes: harnessing the nanotextured surface of swarf for effective utilisation of Pt and Co for hydrogen production
Hydrogen is considered to be the key element to achieving climate neutrality, leading to a massive demand for electrocatalysts. This work explores the transformation of metal waste into active and stable electrode materials for water splitting by modifying the surface through atomic deposition of platinum (Pt) and cobalt (Co). Our study finds that with the addition of only 28 μg cm−2 of Pt and 30 μg cm−2 of Co to metal waste, high-performance electrolysis can be achieved. We investigated discarded stainless-steel (SST), titanium (Ti), and nickel (Ni) alloys and found that they had nanotextured surfaces, consisting of 10–50 nm wide grooves, which offered an excellent platform for effective bonding of Pt or Co atoms. We demonstrate a strong synergistic relationship between the metal of the swarf surface and the metal of catalytically active centers, such that only some combinations lead to effective electrocatalysts. Furthermore, we discovered that the surface density of atomically deposited Pt or Co has a profound impact on the nanoscale morphology of the active centers, providing a mechanism for the optimization of electrocatalytic characteristics. For instance, the optimal Pt loading (28 μg cm−2) on Ti swarf yields 5–20 nm Pt nanoparticles within the grooves with exceptional hydrogen evolution reaction (HER) activity. Similarly, the optimal surface density of Co (30 μg cm−2) on Ni swarf generates ∼100 nm interlinked flakes of Co(OH)2 with outstanding oxygen evolution reaction (OER) performance. Combining these best electrodes in a full-cell electrolyser resulted in a current density of 40 mA cm−2 at 1.6 V vs. RHE and the rates of H2 and O2 production of 22.09 and 10.75 mmol min−1, respectively, with 100% faradaic efficiency with no decrease in activity in 24 hours. This study opens the door to more sustainable electrode fabrication and effective hydrogen production in alkaline water electrolysis
Stage-specific proteomes from onchocerca ochengi, sister species of the human river blindness parasite, uncover adaptations to a nodular lifestyle
Despite 40 years of control efforts, onchocerciasis (river blindness) remains one of the most important neglected tropical diseases, with 17 million people affected. The etiological agent, Onchocerca volvulus, is a filarial nematode with a complex lifecycle involving several distinct stages in the definitive host and blackfly vector. The challenges of obtaining sufficient material have prevented high-throughput studies and the development of novel strategies for disease control and diagnosis. Here, we utilize the closest relative of O. volvulus, the bovine parasite Onchocerca ochengi, to compare stage-specific proteomes and host-parasite interactions within the secretome. We identified a total of 4260 unique O. ochengi proteins from adult males and females, infective larvae, intrauterine microfilariae, and fluid from intradermal nodules. In addition, 135 proteins were detected from the obligate Wolbachia symbiont. Observed protein families that were enriched in all whole body extracts relative to the complete search database included immunoglobulin-domain proteins, whereas redox and detoxification enzymes and proteins involved in intracellular transport displayed stage-specific overrepresentation. Unexpectedly, the larval stages exhibited enrichment for several mitochondrial-related protein families, including members of peptidase family M16 and proteins which mediate mitochondrial fission and fusion. Quantification of proteins across the lifecycle using the Hi-3 approach supported these qualitative analyses. In nodule fluid, we identified 94 O. ochengi secreted proteins, including homologs of transforming growth factor-β and a second member of a novel 6-ShK toxin domain family, which was originally described from a model filarial nematode (Litomosoides sigmodontis). Strikingly, the 498 bovine proteins identified in nodule fluid were strongly dominated by antimicrobial proteins, especially cathelicidins. This first high-throughput analysis of an Onchocerca spp. proteome across the lifecycle highlights its profound complexity and emphasizes the extremely close relationship between O. ochengi and O. volvulus The insights presented here provide new candidates for vaccine development, drug targeting and diagnostic biomarkers
Balancing openness with Indigenous data sovereignty: An opportunity to leave no one behind in the journey to sequence all of life
The field of genomics has benefited greatly from its "openness" approach to data sharing. However, with the increasing volume of sequence information being created and stored and the growing number of international genomics efforts, the equity of openness is under question. The United Nations Convention of Biodiversity aims to develop and adopt a standard policy on access and benefit-sharing for sequence information across signatory parties. This standardization will have profound implications on genomics research, requiring a new definition of open data sharing. The redefinition of openness is not unwarranted, as its limitations have unintentionally introduced barriers of engagement to some, including Indigenous Peoples. This commentary provides an insight into the key challenges of openness faced by the researchers who aspire to protect and conserve global biodiversity, including Indigenous flora and fauna, and presents immediate, practical solutions that, if implemented, will equip the genomics community with both the diversity and inclusivity required to respectfully protect global biodiversity
LSST Science Book, Version 2.0
A survey that can cover the sky in optical bands over wide fields to faint
magnitudes with a fast cadence will enable many of the exciting science
opportunities of the next decade. The Large Synoptic Survey Telescope (LSST)
will have an effective aperture of 6.7 meters and an imaging camera with field
of view of 9.6 deg^2, and will be devoted to a ten-year imaging survey over
20,000 deg^2 south of +15 deg. Each pointing will be imaged 2000 times with
fifteen second exposures in six broad bands from 0.35 to 1.1 microns, to a
total point-source depth of r~27.5. The LSST Science Book describes the basic
parameters of the LSST hardware, software, and observing plans. The book
discusses educational and outreach opportunities, then goes on to describe a
broad range of science that LSST will revolutionize: mapping the inner and
outer Solar System, stellar populations in the Milky Way and nearby galaxies,
the structure of the Milky Way disk and halo and other objects in the Local
Volume, transient and variable objects both at low and high redshift, and the
properties of normal and active galaxies at low and high redshift. It then
turns to far-field cosmological topics, exploring properties of supernovae to
z~1, strong and weak lensing, the large-scale distribution of galaxies and
baryon oscillations, and how these different probes may be combined to
constrain cosmological models and the physics of dark energy.Comment: 596 pages. Also available at full resolution at
http://www.lsst.org/lsst/sciboo
LSST: from Science Drivers to Reference Design and Anticipated Data Products
(Abridged) We describe here the most ambitious survey currently planned in
the optical, the Large Synoptic Survey Telescope (LSST). A vast array of
science will be enabled by a single wide-deep-fast sky survey, and LSST will
have unique survey capability in the faint time domain. The LSST design is
driven by four main science themes: probing dark energy and dark matter, taking
an inventory of the Solar System, exploring the transient optical sky, and
mapping the Milky Way. LSST will be a wide-field ground-based system sited at
Cerro Pach\'{o}n in northern Chile. The telescope will have an 8.4 m (6.5 m
effective) primary mirror, a 9.6 deg field of view, and a 3.2 Gigapixel
camera. The standard observing sequence will consist of pairs of 15-second
exposures in a given field, with two such visits in each pointing in a given
night. With these repeats, the LSST system is capable of imaging about 10,000
square degrees of sky in a single filter in three nights. The typical 5
point-source depth in a single visit in will be (AB). The
project is in the construction phase and will begin regular survey operations
by 2022. The survey area will be contained within 30,000 deg with
, and will be imaged multiple times in six bands, ,
covering the wavelength range 320--1050 nm. About 90\% of the observing time
will be devoted to a deep-wide-fast survey mode which will uniformly observe a
18,000 deg region about 800 times (summed over all six bands) during the
anticipated 10 years of operations, and yield a coadded map to . The
remaining 10\% of the observing time will be allocated to projects such as a
Very Deep and Fast time domain survey. The goal is to make LSST data products,
including a relational database of about 32 trillion observations of 40 billion
objects, available to the public and scientists around the world.Comment: 57 pages, 32 color figures, version with high-resolution figures
available from https://www.lsst.org/overvie
Drug Discovery for Schistosomiasis: Hit and Lead Compounds Identified in a Library of Known Drugs by Medium-Throughput Phenotypic Screening
The flatworm disease schistosomiasis infects over 200 million people with just one drug (praziquantel) available—a concern should drug resistance develop. Present drug discovery approaches for schistosomiasis are slow and not conducive to automation in a high-throughput format. Therefore, we designed a three-component screen workflow that positions the larval (schistosomulum) stage of S. mansoni at its apex followed by screens of adults in culture and, finally, efficacy tests in infected mice. Schistosomula are small enough and available in sufficient numbers to interface with automated liquid handling systems and prosecute thousands of compounds in short time frames. We inaugurated the workflow with a 2,160 compound library that includes known drugs in order to cost effectively ‘re-position’ drugs as new therapies for schistosomiasis and/or identify compounds that could be modified to that end. We identify a variety of ‘hit’ compounds (antibiotics, psychoactives, antiparasitics, etc.) that produce behavioral responses (phenotypes) in schistosomula and adults. Tests in infected mice of the most promising hits identified a number of ‘leads,’ one of which compares reasonably well with praziquantel in killing worms, decreasing egg production by the parasite, and ameliorating disease pathology. Efforts continue to more fully automate the workflow. All screen data are posted online as a drug discovery resource
Mining a Cathepsin Inhibitor Library for New Antiparasitic Drug Leads
The targeting of parasite cysteine proteases with small molecules is emerging as a possible approach to treat tropical parasitic diseases such as sleeping sickness, Chagas' disease, and malaria. The homology of parasite cysteine proteases to the human cathepsins suggests that inhibitors originally developed for the latter may be a source of promising lead compounds for the former. We describe here the screening of a unique ∼2,100-member cathepsin inhibitor library against five parasite cysteine proteases thought to be relevant in tropical parasitic diseases. Compounds active against parasite enzymes were subsequently screened against cultured Plasmodium falciparum, Trypanosoma brucei brucei and/or Trypanosoma cruzi parasites and evaluated for cytotoxicity to mammalian cells. The end products of this effort include the identification of sub-micromolar cell-active leads as well as the elucidation of structure-activity trends that can guide further optimization efforts
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