Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

We show the distribution of SARS-CoV-2 genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three available genomic nomenclature systems for SARS-CoV-2 to all sequence data from the WHO European Region available during the COVID-19 pandemic until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation. We provide a comparison of the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.Peer reviewe

The deep structure of a sea-floor hydrothermal deposit

Hydrothermal circulation at the crests of mid-ocean ridges plays an important role in transferring heat from the interior of the Earth1, 2, 3. A consequence of this hydrothermal circulation is the formation of metallic ore bodies known as volcanic-associated massive sulphide deposits. Such deposits, preserved on land, were important sources of copper for ancient civilizations and continue to provide a significant source of base metals (for example, copper and zinc)4, 5, 6. Here we present results from Ocean Drilling Program Leg 169, which drilled through a massive sulphide deposit on the northern Juan de Fuca spreading centre and penetrated the hydrothermal feeder zone through which the metal-rich fluids reached the sea floor. We found that the style of feeder-zone mineralization changes with depth in response to changes in the pore pressure of the hydrothermal fluids and discovered a stratified zone of high-grade copper-rich replacement mineralization below the massive sulphide deposit. This copper-rich zone represents a type of mineralization not previously observed below sea-floor deposits, and may provide new targets for land-based mineral exploration

Objectives and applications of a statistical environmental stratification of Europe

Stratifications are made to divide environmental gradients into convenient units and then to use these as areas in which objects and variables might have relatively consistent characteristics. Statistical classification is a useful approach for obtaining this insight into complex environmental patterns and help to simplify heterogeneity. Traditional classifications of the environment are mostly subjective and based on expert knowledge. They are largely intended for descriptive purposes. Present day techniques now allow for continent wide statistically based environmental stratifications that can be applied consistently throughout Europe. Such environmental stratifications can provide the basis for assessment and monitoring biodiversity, land cover and land use and be a starting point for reporting on the European environment. The stratification presented here allows upscaling and downscaling, if needed to reach specified objectives. It can be applied in environmental reporting. Its application as a framework for land cover estimation is elaborated using Portuguese Land cover data

Intoxicação natural por Amaranthus spinosus (Amaranthaceae) em ovinos no Sudeste do Brasil Amaranthus spinosus (Amaranthaceae) poisoning in sheep in southern Brazil

No Estado do Rio de Janeiro descreve-se um surto de intoxicação aguda por Amaranthus spinosus em 12 ovelhas, caracterizado clinicamente por hálito urêmico, ausência de movimentos ruminais, dispnéia e aborto. Os animais foram colocados em um pasto adubado e severamente invadido pela planta. A necropsia realizada em seis ovinos revelou rins pálidos, em geral, com estriações esbranquiçadas desde o córtex até a medula; em um animal verificaram-se diversos infartos sob forma de figuras geométricas no córtex. O fígado apresentava-se mais claro, por vezes com lobulação evidente. Em um animal verificaram-se áreas pálidas no miocárdio. Os pulmões congestos, algo mais pesados e consistentes, por vezes evidenciavam áreas de hepatização vermelha e cinzenta na porção cranial. Petéquias, equimoses e sufusões foram observadas em serosas, na mucosa do tubo digestório e em outros órgãos. Ao exame histológico verificaram-se acentuada nefrose tubular tóxica, focos aleatórios de necrose coagulativa no fígado, áreas de necrose coagulativa no miocárdio e pneumonia intersticial aguda incipiente acompanhada por áreas de broncopneumonia. Na literatura não foram encontradas referências à intoxicação natural por A. spinosus em ovinos. Tentativas de reprodução da intoxicação com a planta em ovinos, não foram bem sucedidas, provavelmente porque, nos experimentos, não se utilizou A. spinosus proveniente de áreas adubadas. A necrose do miocárdio encontrada, ao exame microscópico do coração de diversos animais foi atribuída a hipercalemia secundária à insuficiência renal, ao passo que a gênese dos infartos renais verificados em um ovino permanece obscura.<br>An outbreak of acute poisoning caused by Amaranthus spinosus is described in ewes of southern Brazil. The clinical signs were characterized by uremic halitosis, loss of ruminal motility, dispnoea and abortion. Grossly in the kidneys there were pale red spots, white streaks extending from cortex to medulla, and congestion. Histologically there was a severe acute tubular nephrosis, dispersed foci of coagulative necrosis in the liver, areas of coagulative necrosis in the myocardium and acute incipient interstitial pneumonia as well as secondary bronchopneumonia. Myocardial coagulative necrosis observed in seven sheep was attributed to hyperkalemia secondary to renal insufficiency. No references to spontaneous A. spinosus poisoning in sheep was found in the literature. Attempt to reproduce the poisoning by administration of the plant to sheep was insuccessful, probably because A. spinosus used was not from fertilized areas