Allele specific expression analysis identifies regulatory variation associated with stress-related genes in the Mexican highland maize landrace Palomero Toluqueño.

BackgroundGene regulatory variation has been proposed to play an important role in the adaptation of plants to environmental stress. In the central highlands of Mexico, farmer selection has generated a unique group of maize landraces adapted to the challenges of the highland niche. In this study, gene expression in Mexican highland maize and a reference maize breeding line were compared to identify evidence of regulatory variation in stress-related genes. It was hypothesised that local adaptation in Mexican highland maize would be associated with a transcriptional signature observable even under benign conditions.MethodsAllele specific expression analysis was performed using the seedling-leaf transcriptome of an F1 individual generated from the cross between the highland adapted Mexican landrace Palomero Toluqueño and the reference line B73, grown under benign conditions. Results were compared with a published dataset describing the transcriptional response of B73 seedlings to cold, heat, salt and UV treatments.ResultsA total of 2,386 genes were identified to show allele specific expression. Of these, 277 showed an expression difference between Palomero Toluqueño and B73 alleles under benign conditions that anticipated the response of B73 cold, heat, salt and/or UV treatments, and, as such, were considered to display a prior stress response. Prior stress response candidates included genes associated with plant hormone signaling and a number of transcription factors. Construction of a gene co-expression network revealed further signaling and stress-related genes to be among the potential targets of the transcription factors candidates.DiscussionPrior activation of responses may represent the best strategy when stresses are severe but predictable. Expression differences observed here between Palomero Toluqueño and B73 alleles indicate the presence of cis-acting regulatory variation linked to stress-related genes in Palomero Toluqueño. Considered alongside gene annotation and population data, allele specific expression analysis of plants grown under benign conditions provides an attractive strategy to identify functional variation potentially linked to local adaptation

In vitro study of antiamoebic activity of methanol extract of fruit of Pimpinella anisum on trophozoites of Entamoeba histolytica HM1-IMSS

The aniseed plant Pimpinella anisum (Saunf-Hindi) is one of the most ancient medicinal plants used by man. Currently, this plant has several uses in the food industry as spice, whereas in the pharmacopoeia, it is used as an expectorant in digestive disturbances, as mild diuretic, and as insect repellent in external use. In this paper, we evaluated the biological activity of methanolic extract of P. anisum on in vitro growth of Entamoeba histolytica HM1-IMSS under axenic conditions. We observed that the growth inhibition of E. histolytica was at CI50 = 0.034 μg/mL. Results confirm the antiamoebic activity of the methanolic extract of P. anisum.Keywords: Pimpinella anisum, Entamoeba histolytica, antiamoebic activity, medicinal plantsAfrican Journal of Biotechnology Vol. 12(16), pp. 2065-206

Phosphomannosylation and the functional analysis of the extended Candida albicans MNN4-like gene family

We thank Luz A. López-Ramírez (Universidad de Guanajuato) for technical assistance. This work was supported by Consejo Nacional de Ciencia y Tecnología (ref. CB2011/166860; PDCPN2014-247109, and FC 2015-02-834), Universidad de Guanajuato (ref. 000025/11; 0087/13; ref. 1025/2016; Convocatoria Institucional para Fortalecer la Excelencia Académica 2015; CIFOREA 89/2016), Programa de Mejoramiento de Profesorado (ref. UGTO-PTC-261), and Red Temática Glicociencia en Salud (CONACYT-México). NG acknowledges the Wellcome Trust (086827, 075470, 101873, and 200208) and MRC Centre for Medical Mycology for funding (N006364/1). KJ was supported by a research visitor grant to Aberdeen from China Scholarship Council (CSC No. 201406055024). The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fmicb.2017.02156/full#supplementary-materialPeer reviewedPublisher PD

Nanotecnología aplicada al desarrollo de películas inteligentes para la conservación de productos hortofrutícolas.

La calidad de productos hortofrutícolas se ve afectada por el crecimiento de microorganismos, entre los principales se encuentran hongos fitopatógenos del género Penicillum, Fusarium, Alternaria, Geotrichum y Rhizopus. Datos emitidos tras el programa federal “Cruzada nacional contra el hambre” muestran que es uno de los productos con mayor porcentaje de merma, hasta del 30 % de la producción. Para mantener la calidad de estos productos se evalúa el uso de activos naturales de piel de Punica granatum incorporados en micropartículas poliméricas sensibles a pH ácido, por lo que se aprovecha la acidez provocada por la infección. La extracción se realizó mediante la técnica de maceración con agitación en sistema metanol – agua 7:3 y etanol – agua en la misma proporción, se eliminó el solvente orgánico utilizando un rotavapor. Para la formulación de las micropartículas de 1 µm de tamaño promedio, se implementó la técnica de doble emulsión (w/o/w)- evaporación, usando el polímero Eudragit E-100. Se evaluó la actividad antifúngica contra Geotrichum candidum causante de la pudrición ácida en jitomate in vitro mediante la técnica de microdiluciones en microplaca (extracto libre y encapsulado). La formulación de micropartículas incorporadas con extracto permitirá lograr una liberación prolongada, además de ser fácilmente lavable e inocua

A comparison of robust polynomial fitting, global geopotential model and spectral analysis for regional–residual gravity field separation in the Doñana National Park (Spain)

Doñana National Park is a protected area of approximately 500 km2 located on the SW coast of Spain with singular and interesting ecological and geological features. A gravimetric survey is presented where L&R gravity metres were used in the gravimetric observations with GPS and high-precision levelling positioning. Bouguer gravity anomalies were computed and least squares prediction was used for gross-error detection. Robust polynomial fitting, the recent EGM2008 global geopotential model (complete to degree and order 2159), and spectral analysis were tested for regional–residual gravity field separation. A detailed description of the gravimetric characteristics of the Doñana National Park is presented and the values of residual gravity anomalies were correlated with geological features, where the use of the EGM2008 global geopotential model has revealed an interesting tool for regional–residual gravity field separation. Finally, the interpretation of the results is justified by the well-known geological aspects of the park, but some modifications in the boundaries of the different geological features are needed in order to fit the modelled gravity with the residual gravity anomalies in the two cross-sections analysed.The studies presented here were part of CICYT (Spanish Research Directorate) research project nos. HID 97-0321 and REN2001-1293. We would like to thank all UPC members participating in these projects and the staff from the Biological Station of Donana (CSIC), Palacio de Donana and Donana National Park. We remain deeply grateful for the fruitful discussion with Dr. Salvany and for the geological review of the manuscript.Martín Furones, ÁE.; Nuñez Andrés, M.; Gili, J.; Anquela Julián, AB. (2011). A comparison of robust polynomial fitting, global geopotential model and spectral analysis for regional–residual gravity field separation in the Doñana National Park (Spain). Journal of Applied Geophysics. 75(2):327-337. https://doi.org/10.1016/j.jappgeo.2011.06.037S32733775

Characterization of Color Production in Xalla´s Palace Complex, Teotihuacan

A multi-analytical approach was used to characterize color remains from Xalla, a Teotihuacan palace complex (project Teotihuacan, Elite and Government. Excavations in Xalla led by Linda R. Manzanilla). Color samples were obtained from polished lithic instruments and pigment ores. Those samples were analyzed combining microscopic and spectroscopic techniques. Our results coincide with previous studies in Teotihuacan, with the chromatic palette displaying a predominance of iron oxides such as hematite, yellow ochre and natural earths, as well as malachite, celadonite and glauconite. We have enlarged the corpus of raw materials with the characterization of jarosite and bone white and mica as aggregate. The identification of raw materials crossed with functional analysis of polished lithic artefacts suggests a production and application process for the pigmenting materials that were divided in four phases, from the crushing of the raw material to the application and finishing of the painted surfaces

A comprehensive review on monitoring and purification of water through tunable 2D nanomaterials

Abstract Instead of typical household trash, the heavy metal complexes, organic chemicals, and other poisons produced by huge enterprises threaten water systems across the world. In order to protect our drinking water from pollution, we must keep a close eye on the situation. Nanotechnology, specifically two-dimensional (2D) nanomaterials, is used in certain wastewater treatment systems. Graphene, g-C3N4, MoS2, and MXene are just a few examples of emerging 2D nanomaterials that exhibit an extraordinary ratio of surface (m3), providing material consumption, time consumption, and treatment technique for cleaning and observing water. In this post, we'll talk about the ways in which 2D nanomaterials may be tuned to perform certain functions, namely how they can be used for water management. The following is a quick overview of nanostructured materials and its possible use in water management: Also discussed in length are the applications of 2D nanomaterials in water purification, including pollutant adsorption, filtration, disinfection, and photocatalysis. Fluorescence sensors, colorimetric, electrochemical, and field-effect transistors are only some of the devices being studied for their potential use in monitoring water quality using 2D nanomaterials. Utilizing 2D content has its benefits and pitfalls when used to water management. New developments in this fast-expanding business will boost water treatment quality and accessibility in response to rising awareness of the need of clean, fresh water among future generations

Ética Profesional y Responsabilidad Social Universitaria

este libro compila reflexiones y experiencias en responsabilidad social y ética profesional desde instituciones de Educación Superior. La responsabilidad social universitaria, como ámbito de investigación y de desarrollo conceptual y metodológico es transversal a las universidades, tanto desde el punto de vista organizacional, como desde el misional e investigativo. Quienes impulsen la responsabilidad social, requieren de ética profesional, que debe ser la clave para la construcción de principios que guíen a empresarios, políticos, gestores sociales, investigadores, entre otros, para lograr consensuar el a veces difícil equilibrio entre el bien común y el desarrollo personal

The bHLH transcription factor SPATULA enables cytokinin signaling, and both activate auxin biosynthesis and transport genes at the medial domain of the gynoecium

[EN] Fruits and seeds are the major food source on earth. Both derive from the gynoecium and, therefore, it is crucial to understand the mechanisms that guide the development of this organ of angiosperm species. In Arabidopsis, the gynoecium is composed of two congenitally fused carpels, where two domains: medial and lateral, can be distinguished. The medial domain includes the carpel margin meristem (CMM) that is key for the production of the internal tissues involved in fertilization, such as septum, ovules, and transmitting tract. Interestingly, the medial domain shows a high cytokinin signaling output, in contrast to the lateral domain, where it is hardly detected. While it is known that cytokinin provides meristematic properties, understanding on the mechanisms that underlie the cytokinin signaling pattern in the young gynoecium is lacking. Moreover, in other tissues, the cytokinin pathway is often connected to the auxin pathway, but we also lack knowledge about these connections in the young gynoecium. Our results reveal that cytokinin signaling, that can provide meristematic properties required for CMM activity and growth, is enabled by the transcription factor SPATULA (SPT) in the medial domain. Meanwhile, cytokinin signaling is confined to the medial domain by the cytokinin response repressor ARABIDOPSIS HISTIDINE PHOSPHOTRANSFERASE 6 (AHP6), and perhaps by ARR16 (a type-A ARR) as well, both present in the lateral domains (presumptive valves) of the developing gynoecia. Moreover, SPT and cytokinin, probably together, promote the expression of the auxin biosynthetic gene TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (TAA1) and the gene encoding the auxin efflux transporter PIN-FORMED 3 (PIN3), likely creating auxin drainage important for gynoecium growth. This study provides novel insights in the spatiotemporal determination of the cytokinin signaling pattern and its connection to the auxin pathway in the young gynoecium.IRO, VMZM, HHU and PLS were supported by the Mexican National Council of Science and Technology (CONACyT) with a PhD fellowship (210085, 210100, 243380 and 219883, respectively). Work in the SDF laboratory was financed by the CONACyT grants CB-2012-177739, FC-2015-2/1061, and INFR-2015-253504, and NMM by the CONACyT grant CB-2011-165986. SDF, CF and LC acknowledge the support of the European Union FP7-PEOPLE-2009-IRSES project EVOCODE (grant no. 247587) and H2020-MSCARISE-2015 project ExpoSEED (grant no. 691109). SDF also acknowledges the Marine Biological Laboratory (MBL) in Woods Hole for a scholarship for the Gene Regulatory Networks for Development Course 2015 (GERN2015). IE acknowledges the International European Fellowship-METMADS project and the Universita degli Studi di Milano (RTD-A; 2016). Research in the laboratory of MFY was funded by NSF (grant IOS-1121055), NIH (grant 1R01GM112976-01A1) and the Paul D. Saltman Endowed Chair in Science Education (MFY). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.Reyes Olalde, J.; Zuñiga, V.; Serwatowska, J.; Chávez Montes, R.; Lozano-Sotomayor, P.; Herrera-Ubaldo, H.; Gonzalez Aguilera, K.... (2017). The bHLH transcription factor SPATULA enables cytokinin signaling, and both activate auxin biosynthesis and transport genes at the medial domain of the gynoecium. PLoS Genetics. 13(4):1-31. https://doi.org/10.1371/journal.pgen.1006726S131134Reyes-Olalde, J. I., Zuñiga-Mayo, V. M., Chávez Montes, R. A., Marsch-Martínez, N., & de Folter, S. (2013). Inside the gynoecium: at the carpel margin. Trends in Plant Science, 18(11), 644-655. doi:10.1016/j.tplants.2013.08.002Alvarez-Buylla, E. 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