Automated characterisation of glaciomarine sediments using X-ray computed laminography

This study investigates the potential of a new high-resolution, non-destructive, X-ray imaging technique for the Quaternary Sciences – computed laminography (CL). Greyscale properties are systematically extracted from digital X-radiographic CL images of cored glaciomarine sediments to analyse and characterise sediments at pixel-scale resolution (< 0.1 mm). We show how this can be achieved manually, and also with an easy-to-use, automated statistical tool which we have devised specifically for use in glaciomarine sediments. This Sediment Characteristics tool, in the form of a plugin for the freely available FIJI/ImageJ programme, extracts mean or median X-ray grey values (GV) – a proxy for sediment density; and associated standard deviation (SD) – a proxy for sediment heterogeneity – at sub-mm resolution, across the width of sediment core CL images. We demonstrate how these properties (GV and SD) can be directly used to characterise sediment properties and in particular to quantify the abundance of gravel clasts, or ice-rafted debris, in cored glaciomarine sediments. The tool’s effectiveness is compared with other, more traditional, X-radiographic methods for counting ice-rafted gravel clasts in glaciomarine sediment. We propose that the CL output and Sediment Characteristics tool also have the potential to quantitatively analyse other 3-dimensional structures, such as cyclic lamination (varve) geometry; deformation structures; bioturbation and void space (porosity). Finally, we present the raw code, allowing open-access, transparency and reproducibility in other formats

Love is the triumph of the imagination: daydreams about significant others are associated with increased happiness, love and connection

Social relationships and interactions contribute to daily emotional well-being. The emotional benefits that come from engaging with others are known to arise from real events, but do they also come from the imagination during daydreaming activity? Using experience sampling methodology with 101 participants, we obtained 371 reports of naturally occurring daydreams with social and non-social content and self-reported feelings before and after daydreaming. Social, but not non-social, daydreams were associated with increased happiness, love and connection and this effect was not solely attributable to the emotional content of the daydreams. These effects were only present when participants were lacking in these feelings before daydreaming and when the daydream involved imagining others with whom the daydreamer had a high quality relationship. Findings are consistent with the idea that social daydreams may function to regulate emotion: imagining close others may serve the current emotional needs of daydreamers by increasing positive feelings towards themselves and others

Holocene history of the 79° N ice shelf reconstructed from epishelf lake and uplifted glaciomarine sediments

Acknowledgements This work was funded by a NERC standard grant (grant no. NE/N011228/1), and some radiocarbon analysis was funded by NEIF (grant NE/S011587/1; allocation number 2169.1118). We thank the Alfred Wegener Institute, particularly Angelika Humbert and Hicham Rafiq, for significant logistic support through the iGRIFF project. Additional support was provided by Station Nord (Jorgen Skafte), Nordlandair, Air Greenland, and the Joint Arctic Command. Naalakkersuisut (government of Greenland) provided scientific survey (VU-00121) and export (046/2017) licences for this work. Finally, we would like to thank our (Nanu Travel) field ranger Isak (and dog Ooni) for keeping us safe in the field and taking great pleasure in beating James A. Smith at cards. Financial support This research has been supported by the Natural Environment Research Council (grant no. NE/N011228/1).Peer reviewedPublisher PD

Short-Term, Intermittent Fasting Induces Long-Lasting Gut Health and TOR-Independent Lifespan Extension

Intermittent fasting (IF) can improve function and health during aging in laboratory model organisms, but the mechanisms at work await elucidation. We subjected fruit flies (Drosophila melanogaster) to varying degrees of IF and found that just one month of a 2-day fed:5-day fasted IF regime at the beginning of adulthood was sufficient to extend lifespan. This long-lasting, beneficial effect of early IF was not due to reduced fecundity. Starvation resistance and resistance to oxidative and xenobiotic stress were increased after IF. Early-life IF also led to higher lipid content in 60-day-old flies, a potential explanation for increased longevity. Guts of flies 40 days post-IF showed a significant reduction in age-related pathologies and improved gut barrier function. Improved gut health was also associated with reduced relative bacterial abundance. Early IF thus induced profound long-term changes. Pharmacological and genetic epistasis analysis showed that IF acted independently of the TOR pathway because rapamycin and IF acted additively to extend lifespan, and global expression of a constitutively active S6K did not attenuate the IF-induced lifespan extension. We conclude that short-term IF during early life can induce long-lasting beneficial effects, with robust increase in lifespan in a TOR-independent manner, probably at least in part by preserving gut health

Evolutionary origins of the estrogen signaling system : insights from amphioxus

Author Posting. © The Author(s), 2011. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Journal of Steroid Biochemistry and Molecular Biology 127 (2011): 176–188, doi:10.1016/j.jsbmb.2011.03.022.Classically, the estrogen signaling system has two core components: cytochrome P450 aromatase (CYP19), the enzyme complex that catalyzes the rate limiting step in estrogen biosynthesis; and estrogen receptors (ERs), ligand activated transcription factors that interact with the regulatory region of target genes to mediate the biological effects of estrogen. While the importance of estrogens for regulation of reproduction, development and physiology has been well-documented in gnathostome vertebrates, the evolutionary origins of estrogen as a hormone are still unclear. As invertebrates within the phylum Chordata, cephalochordates (e.g. the amphioxus of the genus Branchiostoma) are among the closest invertebrate relatives of the vertebrates and can provide critical insight into the evolution of vertebrate-specific molecules and pathways. To address this question, this paper briefly reviews relevant earlier studies that help to illuminate the history of the aromatase and ER genes, with a particular emphasis on insights from amphioxus and other invertebrates. We then present new analyses of amphioxus aromatase and ER sequence and function, including an in silico model of the amphioxus aromatase protein, and CYP19 gene analysis. CYP19 shares a conserved gene structure with vertebrates (9 coding exons) and moderate sequence conservation (40% amino acid identity with human CYP19). Modeling of the amphioxus aromatase substrate binding site and simulated docking of androstenedione in comparison to the human aromatase shows that the substrate binding site is conserved and predicts that androstenedione could be a substrate for amphioxus CYP19. The amphioxus ER is structurally similar to vertebrate ERs, but differs in sequence and key residues of the ligand binding domain. Consistent with results from other laboratories, amphioxus ER did not bind radiolabeled estradiol, nor did it modulate gene expression on an estrogen-responsive element (ERE) in the presence 59 of estradiol, 4-hydroxytamoxifen, diethylstilbestrol, bisphenol A or genistein. Interestingly, it has been shown that a related gene, the amphioxus “steroid receptor” (SR), can be activated by estrogens and that amphioxus ER can repress this activation. CYP19, ER and SR are all primarily expressed in gonadal tissue, suggesting an ancient paracrine/autocrinesignaling role, but it is not yet known how their expression is regulated and, if estrogen is actually synthesized in amphioxus, whether it has a role in mediating any biological effects . Functional studies are clearly needed to link emerging bioinformatics and in vitro molecular biology results with organismal physiology to develop an understanding of the evolution of estrogen signaling.Supported by grants from the NIEHS P42 ES07381 (GVC, SV) and EPA (STAR-RD831301) (GVC), a Ruth L Kirschstein National Research Service Award (AT, F32 ES013092-01), an NIH traineeship (SS, SG), a NATO Fellowship (AN) and the Boston University Undergraduate Research Program (LC)

The between and within day variation in gross efficiency

Before the influence of divergent factors on gross efficiency (GE) [the ratio of mechanical power output (PO) to metabolic power input (PI)] can be assessed, the variation in GE between days, i.e. the test–retest reliability, and the within day variation needs to be known. Physically active males (n = 18) performed a maximal incremental exercise test to obtain VO2max and PO at VO2max (PVO2max), and three experimental testing days, consisting of seven submaximal exercise bouts evenly distributed over the 24 h of the day. Each submaximal exercise bout consisted of six min cycling at 45, 55 and 65% PVO2max, during which VO2 and RER were measured. GE was determined from the final 3 min of each exercise intensity with: GE = (PO/PI) × 100%. PI was calculated by multiplying VO2 with the oxygen equivalent. GE measured during the individually highest exercise intensity with RER <1.0 did not differ significantly between days (F = 2.70, p = 0.08), which resulted in lower and upper boundaries of the 95% limits of agreement of 19.6 and 20.8%, respectively, around a mean GE of 20.2%. Although there were minor within day variations in GE, differences in GE over the day were not significant (F = 0.16, p = 0.99). The measurement of GE during cycling at intensities approximating VT is apparently very robust, a change in GE of ~0.6% can be reliably detected. Lastly, GE does not display a circadian rhythm so long as the criteria of a steady-state VO2 and RER <1.0 are applied

Retreat dynamics of the eastern sector of the British–Irish Ice Sheet during the last glaciation

The findings of BRITICE‐CHRONO Transect 2 through the North Sea Basin and eastern England are reported. We define ice‐sheet marginal oscillation between ~31 and 16 ka, with seven distinctive former ice‐sheet limits (L1–7) constrained by Bayesian statistical analysis. The southernmost limit of the North Sea Lobe is recorded by the Bolders Bank Formation (L1; 25.8–24.6 ka). L2 represents ice‐sheet oscillation and early retreat to the northern edge of the Dogger Bank (23.5–22.2 ka), with the Garret Hill Moraine in north Norfolk recording a significant regional readvance to L3 at 21.5–20.8 ka. Ice‐marginal oscillations at ~26–21 ka resulted in L1, L2 and L3 being partially to totally overprinted. Ice‐dammed lakes related to L1–3, including Lake Humber, are dated at 24.1–22.3 ka. Ice‐sheet oscillation and retreat from L4 to L5 occurred between 19.7 and 17.3 ka, with grounding zone wedges marking an important transition from terrestrial to marine tidewater conditions, triggered by the opening of the Dogger Lake spillway between 19.9 and 17.5 ka. L6 relates to ice retreat under glacimarine conditions and final ice retreat into the Firth of Forth by 15.8 ka. L7 (~15 ka) represents an ice retreat from Bosies Bank into the Moray Firth

Encountering Berlant part 1: Concepts otherwise

In Part 1 of ‘Encountering Berlant’, we encounter the promise and provocation of Lauren Berlant's work. In 1000-word contributions, geographers and others stay with what Berlant's thought offers contemporary human geography. They amplify an encounter with their work, demonstrating how a concept, idea, or style disrupts something, opens up a new possibility, or simply invites thinking otherwise. The encounters range across the incredible body of work Berlant left us with, from the ‘national sentimentality’ trilogy through to recent work on negativity. Varying in form and tone, the encounters exemplify and enact the inexhaustible plenitude of Berlant's thought: fantasy, the case, love, impasse, feel tanks, slow death, ellipses, gesture, attrition, intimate public, ambivalence, style. Part 2 of ‘Encountering Berlant’ focuses on Berlant's most influential concept: ‘cruel optimism’. Across these heterogeneous encounters, Berlant's enduring concern with the tensions and possibilities of relationality and how to enact better forms of common life shine through. These enduring concerns and Berlant's commitment to the incoherence and overdetermination of phenomena are summarised in the Introduction, which also explores how Berlant's work has been engaged with in geography. The result is a repository of what an encounter with Berlant's thought makes possible

Phased occupation and retreat of the last British–Irish Ice Sheet in the southern North Sea: geomorphic and seismostratigraphic evidence of a dynamic ice lobe

Along the terrestrial margin of the southern North Sea, previous studies of the MIS 2 glaciation impacting eastern Britain have played a significant role in the development of principles relating to ice sheet dynamics (e.g. deformable beds), and the practice of reconstructing the style, timing, and spatial configuration of palaeo-ice sheets. These detailed terrestrially-based findings have however relied on observations made from only the outer edges of the former ice mass, as the North Sea Lobe (NSL) of the British-Irish Ice Sheet (BIIS) occupied an area that is now almost entirely submarine (c.21–15 ka). Compounded by the fact that marine-acquired data have been primarily of insufficient quality and density, the configuration and behaviour of the last BIIS in the southern North Sea remains surprisingly poorly constrained. This paper presents analysis of a new, integrated set of extensive seabed geomorphological and seismo-stratigraphic observations that both advances the principles developed previously onshore (e.g. multiple advance and retreat cycles), and provides a more detailed and accurate reconstruction of the BIIS at its southern-most extent in the North Sea. A new bathymetry compilation of the region reveals a series of broad sedimentary wedges and associated moraines that represent several terminal positions of the NSL. These former still-stand ice margins (1–4) are also found to relate to newly-identified architectural patterns (shallow stacked sedimentary wedges) in the region's seismic stratigraphy (previously mapped singularly as the Bolders Bank Formation). With ground-truthing constraint provided by sediment cores, these wedges are interpreted as sub-marginal till wedges, formed by complex subglacial accretionary processes that resulted in till thickening towards the former ice-sheet margins. The newly sub-divided shallow seismic stratigraphy (at least five units) also provides an indication of the relative event chronology of the NSL. While there is a general record of south-to-north retreat, seismic data also indicate episodes of ice-sheet re-advance suggestive of an oscillating margin (e.g. MIS 2 maximum not related to first incursion of ice into region). Demonstrating further landform interdependence, geographically-grouped sets of tunnel valleys are shown to be genetically related to these individual ice margins, providing clear insight into how meltwater drainage was organised at the evolving termini of this dynamic ice lobe. The newly reconstructed offshore ice margins are found to be well correlated with previously observed terrestrial limits in Lincolnshire and E. Yorkshire (Holderness) (e.g. MIS 2 maximum and Withernsea Till). This reconstruction will hopefully provide a useful framework for studies targeting the climatic, mass-balance, and external glaciological factors (i.e. Fennoscandian Ice Sheet) that influenced late-stage advance and deglaciation, important for accurately characterising both modern and palaeo-ice sheets

Encountering Berlant part one: Concepts otherwise

In Part 1 of ‘Encountering Berlant’, we encounter the promise and provocation of Lauren Berlant's work. In 1000-word contributions, geographers and others stay with what Berlant's thought offers contemporary human geography. They amplify an encounter with their work, demonstrating how a concept, idea, or style disrupts something, opens up a new possibility, or simply invites thinking otherwise. The encounters range across the incredible body of work Berlant left us with, from the ‘national sentimentality’ trilogy through to recent work on negativity. Varying in form and tone, the encounters exemplify and enact the inexhaustible plenitude of Berlant's thought: fantasy, the case, love, impasse, feel tanks, slow death, ellipses, gesture, attrition, intimate public, ambivalence, style. Part 2 of ‘Encountering Berlant’ focuses on Berlant's most influential concept: ‘cruel optimism’. Across these heterogeneous encounters, Berlant's enduring concern with the tensions and possibilities of relationality and how to enact better forms of common life shine through. These enduring concerns and Berlant's commitment to the incoherence and overdetermination of phenomena are summarised in the Introduction, which also explores how Berlant's work has been engaged with in geography. The result is a repository of what an encounter with Berlant's thought makes possible. Short Abstract Part 1 of ‘Encountering Berlant’ explores the promise and provocation of Lauren Berlant's work. Contributors amplify an encounter with Berlant's concepts, tones, and styles, drawing out their implications for understanding relationality and how to invent and live better ways of being in common. The result is a repository of what Berlant's thinking offers geographers