Anisotropic fluxes and nonlocal interactions in MHD turbulence

We investigate the locality or nonlocality of the energy transfer and of the spectral interactions involved in the cascade for decaying magnetohydrodynamic (MHD) flows in the presence of a uniform magnetic field $\bf B$ at various intensities. The results are based on a detailed analysis of three-dimensional numerical flows at moderate Reynold numbers. The energy transfer functions, as well as the global and partial fluxes, are examined by means of different geometrical wavenumber shells. On the one hand, the transfer functions of the two conserved Els\"asser energies $E^+$ and $E^-$ are found local in both the directions parallel ($k_\|$-direction) and perpendicular ($k_\perp$-direction) to the magnetic guide-field, whatever the ${\bf B}$-strength. On the other hand, from the flux analysis, the interactions between the two counterpropagating Els\"asser waves become nonlocal. Indeed, as the ${\bf B}$-intensity is increased, local interactions are strongly decreased and the interactions with small $k_\|$ modes dominate the cascade. Most of the energy flux in the $k_\perp$-direction is due to modes in the plane at $k_\|=0$, while the weaker cascade in the $k_\|$-direction is due to the modes with $k_\|=1$. The stronger magnetized flows tends thus to get closer to the weak turbulence limit where the three-wave resonant interactions are dominating. Hence, the transition from the strong to the weak turbulence regime occurs by reducing the number of effective modes in the energy cascade.Comment: Submitted to PR

A survey of transposable element classification systems--a call for a fundamental update to meet the challenge of their diversity and complexity.

The increase of publicly available sequencing data has allowed for rapid progress in our understanding of genome composition. As new information becomes available we should constantly be updating and reanalyzing existing and newly acquired data. In this report we focus on transposable elements (TEs) which make up a significant portion of nearly all sequenced genomes. Our ability to accurately identify and classify these sequences is critical to understanding their impact on host genomes. At the same time, as we demonstrate in this report, problems with existing classification schemes have led to significant misunderstandings of the evolution of both TE sequences and their host genomes. In a pioneering publication Finnegan (1989) proposed classifying all TE sequences into two classes based on transposition mechanisms and structural features: the retrotransposons (class I) and the DNA transposons (class II). We have retraced how ideas regarding TE classification and annotation in both prokaryotic and eukaryotic scientific communities have changed over time. This has led us to observe that: (1) a number of TEs have convergent structural features and/or transposition mechanisms that have led to misleading conclusions regarding their classification, (2) the evolution of TEs is similar to that of viruses by having several unrelated origins, (3) there might be at least 8 classes and 12 orders of TEs including 10 novel orders. In an effort to address these classification issues we propose: (1) the outline of a universal TE classification, (2) a set of methods and classification rules that could be used by all scientific communities involved in the study of TEs, and (3) a 5-year schedule for the establishment of an International Committee for Taxonomy of Transposable Elements (ICTTE)

Adaptive Covariance Estimation with model selection

We provide in this paper a fully adaptive penalized procedure to select a covariance among a collection of models observing i.i.d replications of the process at fixed observation points. For this we generalize previous results of Bigot and al. and propose to use a data driven penalty to obtain an oracle inequality for the estimator. We prove that this method is an extension to the matricial regression model of the work by Baraud

Simulations for single-dish intensity mapping experiments

HI intensity mapping is an emerging tool to probe dark energy. Observations of the redshifted HI signal will be contaminated by instrumental noise, atmospheric and Galactic foregrounds. The latter is expected to be four orders of magnitude brighter than the HI emission we wish to detect. We present a simulation of single-dish observations including an instrumental noise model with 1/f and white noise, and sky emission with a diffuse Galactic foreground and HI emission. We consider two foreground cleaning methods: spectral parametric fitting and principal component analysis. For a smooth frequency spectrum of the foreground and instrumental effects, we find that the parametric fitting method provides residuals that are still contaminated by foreground and 1/f noise, but the principal component analysis can remove this contamination down to the thermal noise level. This method is robust for a range of different models of foreground and noise, and so constitutes a promising way to recover the HI signal from the data. However, it induces a leakage of the cosmological signal into the subtracted foreground of around 5%. The efficiency of the component separation methods depends heavily on the smoothness of the frequency spectrum of the foreground and the 1/f noise. We find that as, long as the spectral variations over the band are slow compared to the channel width, the foreground cleaning method still works.Comment: 14 pages, 12 figures. Submitted to MNRA

Mesalazine: A Novel Etiology For Drug-Induced Urinary Calculi

We report the case of a 23-year-old woman treated by mesalazine for ulcerative colitis and who subsequently presented recurrent renal colic due to mesalazine urinary stones. This is the second case described in the literature.Mesalazine stones are soft, friable and have an orange-beige color. They are not visible on non-contrast computed tomography (CT). Their diagnosis is based on morpho-constitutional analysis and CT-urography. Patients treatedby mesalazine who present renal colic should undergo CT-urography in order to make the diagnosis

Three-dimensional interferometric, spectrometric, and planetary views of Procyon

We used a new realistic 3D radiative-hydrodynamical model atmosphere of Procyon generated with the Stagger Code and synthetic spectra computed with the radiative transfer code Optim3D to re-analyze interferometric and spectroscopic data from the optical to the infrared of Procyon. We compute intensity maps in two optical filters centered at 500 and 800 nm (MARK III) and one infrared filter centered at 2200 nm (VINCI). We constructed stellar disk images accounting for the center-to-limb variations and used them to derive visibility amplitudes and closure phases. We provide 3D limb-darkening coefficients in the optical as well as in the infrared. We show that visibility curves and closure phases show clear deviations from circular symmetry from the 3rd lobe on. These deviations are detectable with current interferometers using closure phases. We derive new angular diameters at different wavelengths with two independent methods based on 3D simulations. We find a diameter_Vinci = 5.390 \pm 0.03 mas that this is confirmed by an independent asteroseismic estimation. The resulting Teff is 6591 K, which is consistent with the infrared flux method determinations. We find also a value of the surface gravity log g = 4.01 \pm 0.03 that is larger by 0.05 dex from literature values. Spectrophotometric comparisons with observations provide very good agreement with the spectral energy distribution and photometric colors, allowing us to conclude that the thermal gradient of the simulation matches fairly well Procyon. Finally, we show that the granulation pattern of a planet hosting Procyon-like star has a non-negligible impact on the detection of hot Jupiters in the infrared using interferometry closure phases. It is then crucial to have a comprehensive knowledge of the host star to directly detect and characterize hot Jupiters. In this respect, RHD simulations are very important to reach this aim.Comment: Accepted for publication on Astronomy and Astrophysics, 14 pages, 12 figure

MOST photometry of the roAp star 10 Aql

Context: We present 31.2 days of nearly continuous MOST photometry of the roAp star 10Aql. Aims:The goal was to provide an unambiguous frequency identification for this little studied star, as well as to discuss the detected frequencies in the context of magnetic models and analyze the influence of the magnetic field on the pulsation. Methods: Using traditional Fourier analysis techniques on three independent data reductions, intrinsic frequencies for the star are identified. Theoretical non-adiabatic axisymmetric modes influenced by a magnetic field having polar field strengths Bp = 0-5kG were computed to compare the observations to theory. Results: The high-precision data allow us to identify three definite intrinsic pulsation frequencies and two other candidate frequencies with low S/N. Considering the observed spacings, only one (50.95microHz) is consistent with the main sequence nature of roAp stars. The comparison with theoretical models yields a best fit for a 1.95Msun model having solar metallicity, suppressed envelope convection, and homogenous helium abundance. Furthermore, our analysis confirms the suspected slow rotation of the star and sets new lower limits to the rotation period (Prot>1 month) and inclination (i>30\pm10deg.). Conclusions:The observed frequency spectrum is not rich enough to unambiguously identify a model. On the other hand, the models hardly represent roAp stars in detail due to the approximations needed to describe the interactions of the magnetic field with stellar structure and pulsation. Consequently, errors in the model frequencies needed for the fitting procedure can only be estimated. Nevertheless, it is encouraging that models which suppress convection and include solar metallicity, in agreement with current concepts of roAp stars, fit the observations best.Comment: accepted by A&

Calibrating photometric redshifts with intensity mapping observations

Imaging surveys of galaxies will have a high number density and angular resolution yet a poor redshift precision. Intensity maps of neutral hydrogen (HI) will have accurate redshift resolution yet will not resolve individual sources. Using this complementarity, we show how the clustering redshifts approach, proposed for spectroscopic surveys can also be used in combination with intensity mapping observations to calibrate the redshift distribution of galaxies in an imaging survey and, as a result, reduce uncertainties in photometric redshift measurements. We show how the intensity mapping surveys to be carried out with the MeerKAT, HIRAX and SKA instruments can improve photometric redshift uncertainties to well below the requirements of DES and LSST. The effectiveness of this method as a function of instrumental parameters, foreground subtraction and other potential systematic errors is discussed in detail.Scopu

A spectroscopic analysis of the chemically peculiar star HD207561

In this paper we present a high-resolution spectroscopic analysis of the chemically peculiar star HD207561. During a survey programme to search for new roAp stars in the Northern hemisphere, Joshi et al. (2006) observed significant photometric variability on two consecutive nights in the year 2000. The amplitude spectra of the light curves obtained on these two nights showed oscillations with a frequency of 2.79 mHz [P~6-min]. However, subsequent follow-up observations could not confirm any rapid variability. In order to determine the spectroscopic nature of HD207561, high-resolution spectroscopic and spectro-polarimetric observations were carried out. A reasonable fit of the calculated Hbeta line profile to the observed one yields the effective temperature (Teff) and surface gravity (log g) as 7300 K and 3.7 dex, respectively. The derived projected rotational velocity (vsin i) for HD207561 is 74 km/sec indicative of a relatively fast rotator. The position of HD207561 in the H-R diagram implies that this is slightly evolved from the main-sequence and located well within the delta-Scuti instability strip. The abundance analysis indicates the star has slight under-abundances of Ca and Sc and mild over-abundances of iron-peak elements. The spectro-polarimetric study of HD207561 shows that the effective magnetic field is within the observational error of 100 gauss (G). The spectroscopic analysis revealed that the star has most of the characteristics similar to an Am star, rather than an Ap star, and that it lies in the delta-Scuti instability strip; hence roAp pulsations are not expected in HD207561, but low-overtone modes might be excited.Comment: 8 pages, 7 figures, 3 tables. Accepted for pubblication in MNRA