Sedimentary pyrite δ^(34)S differs from porewater sulfide in Santa Barbara Basin: proposed role of organic sulfur

Santa Barbara Basin sediments host a complex network of abiotic and metabolic chemical reactions that knit together the carbon, sulfur, and iron cycles. From a 2.1-m sediment core collected in the center of the basin, we present high-resolution profiles of the concentrations and isotopic compositions of all the major species in this system: sulfate, sulfide (∑H_2S), elemental sulfur (S^0), pyrite, extractable organic sulfur (OS), proto-kerogen S, total organic and dissolved inorganic carbon, and total and reducible iron. Below 10 cm depth, the core is characterized by low apparent sulfate reduction rates (<0.01 mM/yr) except near the sulfate-methane transition zone. Surprisingly, pyrite forming in shallow sediments is ∼30‰ more ^(34)S-depleted than coexisting ∑H_2S in porewater. S^0 has the same strongly ^(34)S-depleted composition as pyrite where it forms near the sediment–water interface, though not at depth. This pattern is not easily explained by conventional hypotheses in which sedimentary pyrite derives from abiotic reactions with porewater ∑H_2S or from the products of S^0 disproportionation. Instead, we propose that pyrite formation in this environment occurs within sulfate reducing microbial aggregates or biofilms, where it reflects the isotopic composition of the immediate products of bacterial sulfate reduction. Porewater ∑H_2S in Santa Barbara Basin may be more ^(34)S-enriched than pyrite due to equilibration with relatively ^(34)S-enriched OS. The difference between OS and pyrite δ^(34)S values would then reflect the balance between microbial sulfide formation and the abundance of exchangeable OS. Both OS and pyrite δ34S records thus have the potential to provide valuable information about biogeochemical cycles and redox structure in sedimentary paleoenvironments

Sulfur isotopic composition of individual organic compounds from Cariaco Basin sediments

Reactions between reduced inorganic sulfur and organic compounds are thought to be important for the preservation of organic matter (OM) in sediments, but the sulfurization process is poorly understood. Sulfur isotopes are potentially useful tracers of sulfurization reactions, which often occur in the presence of a strong porewater isotopic gradient driven by microbial sulfate reduction. Prior studies of bulk sedimentary OM indicate that sulfurized products are ^(34)S-enriched relative to coexisting sulfide, and experiments have produced ^(34)S-enriched organosulfur compounds. However, analytical limitations have prevented the relationship from being tested at the molecular level in natural environments. Here we apply a new method, coupled gas chromatography – inductively coupled plasma mass spectrometry, to measure the compound-specific sulfur isotopic compositions of volatile organosulfur compounds over a 6 m core of anoxic Cariaco Basin sediments. In contrast to current conceptual models, nearly all extractable organosulfur compounds were substantially depleted in ^(34)S relative to coexisting kerogen and porewater sulfide. We hypothesize that this ^(34)S depletion is due to a normal kinetic isotope effect during the initial formation of a carbon-sulfur bond and that the source of sulfur in this relatively irreversible reaction is most likely the bisulfide anion in sedimentary pore water. The ^(34)S-depleted products of irreversible bisulfide addition alone cannot explain the isotopic composition of total extractable or residual OM. Therefore, at least two different sulfurization pathways must operate in the Cariaco Basin, generating isotopically distinct products. Compound-specific sulfur isotope analysis thus provides new insights into the timescales and mechanisms of OM sulfurization

Improving the performance of community health workers in humanitarian emergencies: a realist evaluation protocol for the PIECES programme.

INTRODUCTION Understanding what enhances the motivation and performance of community health workers (CHWs) in humanitarian emergencies represents a key research gap within the field of human resources for health. This paper presents the research protocol for the Performance ImprovEment of CHWs in Emergency Settings (PIECES) research programme. Enhancing Learning and Research in Humanitarian Action (ELRHA) funded the development of this protocol as part of their Health in Humanitarian Crises (R2HC) call (No.19839). PIECES aims to understand what factors improve the performance of CHWs in level III humanitarian emergencies. METHODS AND ANALYSIS The suggested protocol uses a realist evaluation with multiple cases across the 3 country sites: Turkey, Iraq and Lebanon. Working with International Medical Corps (IMC), an initial programme theory was elicited through literature and document reviews, semistructured interviews and focus groups with IMC programme managers and CHWs. Based on this initial theory, this protocol proposes a combination of semistructured interviews, life histories and critical incident narratives, surveys and latent variable modelling of key constructs to explain how contextual factors work to trigger mechanisms for specific outcomes relating to IMC's 300+ CHWs' performance. Participants will also include programme staff, CHWs and programme beneficiaries. Realist approaches will be used to better understand 'what works, for whom and under what conditions' for improving CHW performance within humanitarian contexts. ETHICS AND DISSEMINATION Trinity College Dublin's Health Policy and Management/Centre for Global Health Research Ethics Committee gave ethical approval for the protocol development phase. For the full research project, additional ethical approval will be sought from: Université St. Joseph (Lebanon), the Ethics Committee of the Ministry of Health in Baghdad (Iraq) and the Middle East Technical University (Turkey). Dissemination activities will involve a mixture of research feedback, policy briefs, guidelines and recommendations, as well as open source academic articles

Rapid Organic Matter Sulfurization in Sinking Particles from the Cariaco Basin Water Column

Organic matter (OM) burial in marine sediments is a potentially important control on global climate and the long-term redox state of the earth’s surface. Still, we have only a limited understanding of the processes that stabilize OM and facilitate its preservation in the geologic record. Abiotic reactions with (poly)sulfides can enhance the preservation potential of OM, but for this process to be significant it needs to compete with OM remineralization, the majority of which occurs before sinking particles reach the sea floor. Here we investigate whether OM sulfurization occurs within sinking particles in the Cariaco Basin, a modern sulfidic marine environment with high rates of OM burial. Proto-kerogen in sinking particles is frequently more sulfur-rich and ^(34)S-depleted than expectations for biomass, with a composition that is difficult to explain by mixing with resuspended or terrigenous material. Instead, it appears that sulfur is being incorporated into OM on a timescale of days in sinking particles. The flux of this abiogenic organic S from particles is equivalent to approximately two-thirds of the total amount of proto-kerogen S at 10 cm depth in underlying sediments (ODP Core 1002B); after 6000 years of more gradual sulfurization reactions, potential water column sources are still equivalent to nearly half of the total proto-kerogen S in Cariaco sediments. Water column sulfurization is most extensive during periods of upwelling and high primary productivity and appears to involve elemental S, possibly via polysulfides. This process has the potential to deliver large amounts of OM to the sediments by making it less available for remineralization, generating OM-rich deposits. It represents a potentially dynamic sink in the global carbon cycle that can respond to changes in environmental conditions, including the size and intensity of O_2-depleted environments. Water column OM sulfurization could also have played a more significant role in the carbon cycle during ocean anoxic events, for example during the Cretaceous

Place Based Learning Community Planning Guide

The introduction of Place Based Learning Communities (PBLCs) at HSU in 2015 has become an increasingly discussed topic throughout the university. We use the term “Learning Community” in its strictest sense - a curricular approach to education that intentionally links a cluster of courses around an interdisciplinary theme and enrolls a common cohort of students. The production of higher GPAs and retention and significant achievement gap closure among the HSU PBLC cohorts is undeniable. All components are comprehensive in the fact that they build a sense of community, belonging, and accountability within the students which serve as factors for higher retention and academic success. Each class, event, study session, field trip, and staff and faculty member are all parts of what make PBLC such a success. There are many components that need to be established and collaborations that need to be formed in order to make student achievement possible. In this manual, you will read what these components and collaborations look like and upon conclusion you will understand what goes into creating a successful Place Based Learning Community

Sulfur isotopic composition of individual organic compounds from Cariaco Basin sediments

a b s t r a c t Reactions between reduced inorganic sulfur and organic compounds are thought to be important for the preservation of organic matter (OM) in sediments, but the sulfurization process is poorly understood. Sulfur isotopes are potentially useful tracers of sulfurization reactions, which often occur in the presence of a strong porewater isotopic gradient driven by microbial sulfate reduction. Prior studies of bulk sedimentary OM indicate that sulfurized products are 34 S-enriched relative to coexisting sulfide, and experiments have produced 34 S-enriched organosulfur compounds. However, analytical limitations have prevented the relationship from being tested at the molecular level in natural environments. Here we apply a new method, coupled gas chromatography -inductively coupled plasma mass spectrometry, to measure the compound-specific sulfur isotopic compositions of volatile organosulfur compounds over a 6 m core of anoxic Cariaco Basin sediments. In contrast to current conceptual models, nearly all extractable organosulfur compounds were substantially depleted in 34 S relative to coexisting kerogen and porewater sulfide. We hypothesize that this 34 S depletion is due to a normal kinetic isotope effect during the initial formation of a carbon-sulfur bond and that the source of sulfur in this relatively irreversible reaction is most likely the bisulfide anion in sedimentary porewater. The 34 S-depleted products of irreversible bisulfide addition alone cannot explain the isotopic composition of total extractable or residual OM. Therefore, at least two different sulfurization pathways must operate in the Cariaco Basin, generating isotopically distinct products. Compound-specific sulfur isotope analysis thus provides new insights into the timescales and mechanisms of OM sulfurization

Sulfur isotopic composition of individual organic compounds from Cariaco Basin sediments

a b s t r a c t Reactions between reduced inorganic sulfur and organic compounds are thought to be important for the preservation of organic matter (OM) in sediments, but the sulfurization process is poorly understood. Sulfur isotopes are potentially useful tracers of sulfurization reactions, which often occur in the presence of a strong porewater isotopic gradient driven by microbial sulfate reduction. Prior studies of bulk sedimentary OM indicate that sulfurized products are 34 S-enriched relative to coexisting sulfide, and experiments have produced 34 S-enriched organosulfur compounds. However, analytical limitations have prevented the relationship from being tested at the molecular level in natural environments. Here we apply a new method, coupled gas chromatography -inductively coupled plasma mass spectrometry, to measure the compound-specific sulfur isotopic compositions of volatile organosulfur compounds over a 6 m core of anoxic Cariaco Basin sediments. In contrast to current conceptual models, nearly all extractable organosulfur compounds were substantially depleted in 34 S relative to coexisting kerogen and porewater sulfide. We hypothesize that this 34 S depletion is due to a normal kinetic isotope effect during the initial formation of a carbon-sulfur bond and that the source of sulfur in this relatively irreversible reaction is most likely the bisulfide anion in sedimentary porewater. The 34 S-depleted products of irreversible bisulfide addition alone cannot explain the isotopic composition of total extractable or residual OM. Therefore, at least two different sulfurization pathways must operate in the Cariaco Basin, generating isotopically distinct products. Compound-specific sulfur isotope analysis thus provides new insights into the timescales and mechanisms of OM sulfurization

Metagenome skimming of insect specimen pools: potential for comparative genomics

Metagenomic analyses are challenging in metazoans, but high-copy number and repeat regions can be assembled from lowcoverage sequencing by “genome skimming,” which is applied here as a new way of characterizing metagenomes obtained in an ecological or taxonomic context. Illumina shotgun sequencing on two pools of Coleoptera (beetles) of approximately 200 species each were assembled into tens of thousands of scaffolds. Repeated low-coverage sequencing recovered similar scaffold sets consistently, although approximately 70% of scaffolds could not be identified against existing genome databases. Identifiable scaffolds included mitochondrial DNA, conserved sequences with hits to expressed sequence tag and protein databases, and knownrepeatelementsof high and low complexity, includingnumerous copies ofrRNAandhistone genes.Assemblies of histones captured a diversity of gene order and primary sequence in Coleoptera. Scaffolds with similarity to multiple sites in available coleopteran genome sequences for Dendroctonus and Tribolium revealed high specificity of scaffolds to either of these genomes, in particular for high-copy number repeats. Numerous “clusters” of scaffolds mapped to the same genomic site revealed intraand/or intergenomic variation within a metagenome pool. In addition to effect of taxonomic composition of the metagenomes, the number of mapped scaffolds also revealed structural differences between the two reference genomes, although the significance of this striking finding remains unclear. Finally, apparently exogenous sequences were recovered, including potential food plants, fungal pathogens, and bacterial symbionts. The “metagenome skimming” approach is useful for capturing the genomic diversity of poorly studied, species-rich lineages and opens new prospects in environmental genomic

Parallel recovery in a trilingual speaker: the use of the Bilingual Aphasia Test as a diagnostic complement to the Comprehensive Aphasia Test

We illustrate the value of the Bilingual Aphasia Test in the diagnostic assessment of a trilingual speaker post-stroke living in England for whom English was a non-native language. The Comprehensive Aphasia Test is routinely used to assess patients in English, but only in combination with the Bilingual Aphasia Test is it possible and practical to provide a full picture of the language impairment. We describe our test selection and the assessment it allows us to make

Measurements of long-range near-side angular correlations in sNN=5\sqrt{s_{\text{NN}}}=5TeV proton-lead collisions in the forward region

Two-particle angular correlations are studied in proton-lead collisions at a nucleon-nucleon centre-of-mass energy of $\sqrt{s_{\text{NN}}}=5$TeV, collected with the LHCb detector at the LHC. The analysis is based on data recorded in two beam configurations, in which either the direction of the proton or that of the lead ion is analysed. The correlations are measured in the laboratory system as a function of relative pseudorapidity, $\Delta\eta$, and relative azimuthal angle, $\Delta\phi$, for events in different classes of event activity and for different bins of particle transverse momentum. In high-activity events a long-range correlation on the near side, $\Delta\phi \approx 0$, is observed in the pseudorapidity range $2.0<\eta<4.9$. This measurement of long-range correlations on the near side in proton-lead collisions extends previous observations into the forward region up to $\eta=4.9$. The correlation increases with growing event activity and is found to be more pronounced in the direction of the lead beam. However, the correlation in the direction of the lead and proton beams are found to be compatible when comparing events with similar absolute activity in the direction analysed.Comment: All figures and tables, along with any supplementary material and additional information, are available at https://lhcbproject.web.cern.ch/lhcbproject/Publications/LHCbProjectPublic/LHCb-PAPER-2015-040.htm