8 research outputs found
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Functional variants of DOG1 control seed chilling responses and variation in seasonal life-history strategies in Arabidopsis thaliana.
The seasonal timing of seed germination determines a plant's realized environmental niche, and is important for adaptation to climate. The timing of seasonal germination depends on patterns of seed dormancy release or induction by cold and interacts with flowering-time variation to construct different seasonal life histories. To characterize the genetic basis and climatic associations of natural variation in seed chilling responses and associated life-history syndromes, we selected 559 fully sequenced accessions of the model annual species Arabidopsis thaliana from across a wide climate range and scored each for seed germination across a range of 13 cold stratification treatments, as well as the timing of flowering and senescence. Germination strategies varied continuously along 2 major axes: 1) Overall germination fraction and 2) induction vs. release of dormancy by cold. Natural variation in seed responses to chilling was correlated with flowering time and senescence to create a range of seasonal life-history syndromes. Genome-wide association identified several loci associated with natural variation in seed chilling responses, including a known functional polymorphism in the self-binding domain of the candidate gene DOG1. A phylogeny of DOG1 haplotypes revealed ancient divergence of these functional variants associated with periods of Pleistocene climate change, and Gradient Forest analysis showed that allele turnover of candidate SNPs was significantly associated with climate gradients. These results provide evidence that A. thaliana's germination niche and correlated life-history syndromes are shaped by past climate cycles, as well as local adaptation to contemporary climate
Growth response of three globose cacti to radiation and soil moisture: an experimental test of the mechanism behind the nurse effect
Cactus seedlings often establish under nurse plants which modify environmental conditions by increasing moisture and decreasing solar radiation, which may cause beneficial and detrimental effects, respectively, on seedling growth. Three soil moisture treatments (5%, 25% and 60%) and two solar radiation levels (100% exposure=243 ?mol m?2 s?1, and 40%=102 ?mol m?2 s?1) were used in a factorial design to analyze seedling growth response of three rare cactus species (Mammillaria pectinifera, Obregonia denegrii and Coryphantha werdermannii). The variables evaluated were relative growth rate (RGR), root/shoot ratio (R/S), and K (RGRroots/RGRshoot), obtained from an initial seedling harvest (6-month-old seedlings) and a final harvest 6 months after treatment application. All three species had slow RGRs (0.002–0.012 g g?1 day?1). O. denegrii had the lowest RGR values, but was the only species for which R/S and K varied with soil moisture. While all seedlings responded markedly to soil moisture, no response was observed to radiation treatments. The latter might have been related to the relatively low solar radiation levels present in the greenhouse. Yet, our results suggest that the main benefit nurse plants offer to seedlings is the increase in soil moisture
Propuesta de arquitectura para una red móvil de nueva generación
El paradigma actual de las comunicaciones espera que un usuario sea capaz de acceder a sus servicios independientemente de su localización de una manera transparente. La terminal del usuario podría ser capaz de elegir la mejor tecnología de acceso (Ad hoc, Ethernet, Celulares, etc.) en su ubicación actual y utilizar esta tecnología de una manera transparente para la provisión del servicio deseado. Esta homogeneidad, alta velocidad, seguridad, multi-servicio, redes multi-operador, está siendo desarrollada en el contexto de las redes de nueva generación. Actualmente, se están desplegando los sistemas móviles de tercera generación (3G) y la comunidad investigadora está empezando a definir una arquitectura para las redes de cuarta generación (4G). La principal característica de diseño de las redes de 4G, es la integración de la tecnología IP dentro de las redes móviles celulares con el objetivo de construir una red All-IP. Este artículo presenta el estado del arte de las redes móviles y propone una arquitectura escalable para las redes móviles de nueva generació
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Classification of human chronic inflammatory skin disease based on single-cell immune profiling.
Inflammatory conditions represent the largest class of chronic skin disease, but the molecular dysregulation underlying many individual cases remains unclear. Single-cell RNA sequencing (scRNA-seq) has increased precision in dissecting the complex mixture of immune and stromal cell perturbations in inflammatory skin disease states. We single-cell-profiled CD45+ immune cell transcriptomes from skin samples of 31 patients (7 atopic dermatitis, 8 psoriasis vulgaris, 2 lichen planus (LP), 1 bullous pemphigoid (BP), 6 clinical/histopathologically indeterminate rashes, and 7 healthy controls). Our data revealed active proliferative expansion of the Treg and Trm components and universal T cell exhaustion in human rashes, with a relative attenuation of antigen-presenting cells. Skin-resident memory T cells showed the greatest transcriptional dysregulation in both atopic dermatitis and psoriasis, whereas atopic dermatitis also demonstrated recurrent abnormalities in ILC and CD8+ cytotoxic lymphocytes. Transcript signatures differentiating these rash types included genes previously implicated in T helper cell (TH2)/TH17 diatheses, segregated in unbiased functional networks, and accurately identified disease class in untrained validation data sets. These gene signatures were able to classify clinicopathologically ambiguous rashes with diagnoses consistent with therapeutic response. Thus, we have defined major classes of human inflammatory skin disease at the molecular level and described a quantitative method to classify indeterminate instances of pathologic inflammation. To make this approach accessible to the scientific community, we created a proof-of-principle web interface (RashX), where scientists and clinicians can visualize their patient-level rash scRNA-seq-derived data in the context of our TH2/TH17 transcriptional framework
Ecophysiological and Anatomical Mechanisms behind the Nurse Effect: Which Are More Important? A Multivariate Approach for Cactus Seedlings
BACKGROUND: Cacti establish mostly occurs under the canopy of nurse plants which provide a less stressful micro-environment, although mechanisms underlying this process are unknown. The impact of the combination of light and watering treatments on Opuntia streptacantha (Cactaceae) seedlings was examined. METHODS/PRINCIPAL FINDINGS: Ecophysiological [titratable acidity, osmotic potential (‘solute potential’, Ψ(s)), relative growth rate (RGR) and their components (NAR, SLA, and LWR)], anatomical (chloroplast density, chloroplast frequency, and cell area), and environmental [photosynthetic photon flux density (PPFD) and air temperature] sets of variables were analyzed, assessing relationships between them and measuring the intensity of the relationships. Three harvests were carried out at days 15, 30, and 45. Ψ(s) and acidity content were the most important responses for seedling establishment. The main anatomical and environmental variables were chloroplast density and water availability, respectively. Opuntia streptacantha seedlings establish better in the shade-watering treatment, due to higher Ψ(s) and acidity, unaffected chloroplasts, and lower PPFD. In addition, the chloroplasts of cells under high-light and non-watering treatment were clumped closer to the center of the cytosol than those under shade-drought, to avoid photoinhibition and/or to better distribute or utilize the penetrating light in the green plant tissue. CONCLUSIONS: Opuntia seedlings grow better under the shade, although they can tolerate drought in open spaces by increasing and moving chloroplasts and avoiding drastic decreases in their Ψ(s). This tolerance could have important implications for predicting the impact of climate change on natural desert regeneration, as well as for planning reforestation-afforestation practices, and rural land uses
Ecological, genetic and evolutionary drivers of regional genetic differentiation in Arabidopsis thaliana
The physiology of drought stress in grapevine: towards an integrative definition of drought tolerance
Abstract Water availability is arguably the most important environmental factor limiting crop growth and productivity. Erratic precipitation patterns and increased temperatures resulting from climate change will likely make drought events more frequent in many regions, increasing the demand on freshwater resources and creating major challenges for agriculture. Addressing these challenges through increased irrigation is not always a sustainable solution so there is a growing need to identify and/or breed drought tolerance crop varieties in order to maintain sustainability in the context of climate change. Grapes, a major fruit crop of economic importance, have emerged as a model perennial fruit crop for the study of drought tolerance. This review synthesizes the most recent results on grapevine drought responses, the impact of water deficit on fruit yield and composition, and the identification of drought tolerant varieties. Given the existing gaps in our knowledge of the mechanisms underlying grapevine drought responses this review aims to answer the following question: How can we move towards a more integrative definition of grapevine drought tolerance