Database mining and transcriptional analysis of genes encoding inulin-modifying enzymes of Aspergillus niger

As a soil fungus, Aspergillus niger can metabolize a wide variety of carbon sources, employing sets of enzymes able to degrade plant-derived polysaccharides. In this study the genome sequence of A. niger strain CBS 513.88 was surveyed, to analyse the gene/enzyme network involved in utilization of the plant storage polymer inulin, and of sucrose, the substrate for inulin synthesis in plants. In addition to three known activities, encoded by the genes suc1 (invertase activity; designated sucA), inuE (exo-inulinase activity) and inuA/inuB (endo-inulinase activity), two new putative invertase-like proteins were identified. These two putative proteins lack N-terminal signal sequences and therefore are expected to be intracellular enzymes. One of these two genes, designated sucB, is expressed at a low level, and its expression is up-regulated when A. niger is grown on sucrose- or inulin-containing media. Transcriptional analysis of the genes encoding the sucrose- (sucA) and inulin-hydrolysing enzymes (inuA and inuE) indicated that they are similarly regulated and all strongly induced on sucrose and inulin. Analysis of a creA mutant strain of A. niger revealed that expression of the extracellular inulinolytic enzymes is under control of the catabolite repressor CreA. Expression of the inulinolytic enzymes was not induced by fructose, not even in the creA background, indicating that fructose did not act as an inducer. Evidence is provided that sucrose, or a sucrose-derived intermediate, but not fructose, acts as an inducer for the expression of inulinolytic genes in A. niger

Donor-specific anti-HLA antibodies are not associated with nonanastomotic biliary strictures but both are independent risk factors for graft loss after liver transplantation

Development and application of statistical models for medical scientific researc

Toward an internally consistent astronomical distance scale

Accurate astronomical distance determination is crucial for all fields in astrophysics, from Galactic to cosmological scales. Despite, or perhaps because of, significant efforts to determine accurate distances, using a wide range of methods, tracers, and techniques, an internally consistent astronomical distance framework has not yet been established. We review current efforts to homogenize the Local Group's distance framework, with particular emphasis on the potential of RR Lyrae stars as distance indicators, and attempt to extend this in an internally consistent manner to cosmological distances. Calibration based on Type Ia supernovae and distance determinations based on gravitational lensing represent particularly promising approaches. We provide a positive outlook to improvements to the status quo expected from future surveys, missions, and facilities. Astronomical distance determination has clearly reached maturity and near-consistency.Comment: Review article, 59 pages (4 figures); Space Science Reviews, in press (chapter 8 of a special collection resulting from the May 2016 ISSI-BJ workshop on Astronomical Distance Determination in the Space Age

Measurement of the Atmospheric Muon Spectrum from 20 to 3000 GeV

The absolute muon flux between 20 GeV and 3000 GeV is measured with the L3 magnetic muon spectrometer for zenith angles ranging from 0 degree to 58 degree. Due to the large exposure of about 150 m2 sr d, and the excellent momentum resolution of the L3 muon chambers, a precision of 2.3 % at 150 GeV in the vertical direction is achieved. The ratio of positive to negative muons is studied between 20 GeV and 500 GeV, and the average vertical muon charge ratio is found to be 1.285 +- 0.003 (stat.) +- 0.019 (syst.).Comment: Total 32 pages, 9Figure

The trans-ancestral genomic architecture of glycemic traits

Glycemic traits are used to diagnose and monitor type 2 diabetes and cardiometabolic health. To date, most genetic studies of glycemic traits have focused on individuals of European ancestry. Here we aggregated genome-wide association studies comprising up to 281,416 individuals without diabetes (30% non-European ancestry) for whom fasting glucose, 2-h glucose after an oral glucose challenge, glycated hemoglobin and fasting insulin data were available. Trans-ancestry and single-ancestry meta-analyses identified 242 loci (99 novel; P < 5 x 10(-8)), 80% of which had no significant evidence of between-ancestry heterogeneity. Analyses restricted to individuals of European ancestry with equivalent sample size would have led to 24 fewer new loci. Compared with single-ancestry analyses, equivalent-sized trans-ancestry fine-mapping reduced the number of estimated variants in 99% credible sets by a median of 37.5%. Genomic-feature, gene-expression and gene-set analyses revealed distinct biological signatures for each trait, highlighting different underlying biological pathways. Our results increase our understanding of diabetes pathophysiology by using trans-ancestry studies for improved power and resolution.A trans-ancestry meta-analysis of GWAS of glycemic traits in up to 281,416 individuals identifies 99 novel loci, of which one quarter was found due to the multi-ancestry approach, which also improves fine-mapping of credible variant sets.Diabetes mellitus: pathophysiological changes and therap

On the behaviour of the tropopause folding events over the Tibetan Plateau.

Due to its harsh natural conditions, there had not been any intensive radiosonde observations over the Tibetan Plateau (TP) before the year 2008, when a regional radiosonde observation network was implemented through a Sino-Japan joint cooperation project. This paper reports, on the basis of these observations, on an analysis of the structure of upper troposphere and lower stratosphere (UTLS) and provides observations of stratosphere and troposphere exchange (STE) over the TP. &lt;br&gt;&lt;br&gt; Due to sparseness of high resolution radiosonde data, many previous studies assumed that there was only one thermal tropopause over the TP. Actually, the radiosonde temperature profiles in winter time over the TP often exhibit a multiple tropopause (MT). The MT occurs in winter with a high frequency over the Plateau. MT events during this time are associated with tropopause folds near the subtropical westerly jet. The MT consistently varied with the movement of the jet. The MT becomes a single tropopause with the development of the monsoon. The detailed analyses of MT characteristics are reported in this paper. &lt;br&gt;&lt;br&gt; Earlier analyses of global MT events (with data based on GPS radio occultation, ERA-40 data and Integrated Global Radiosonde Archive database) resulted in a climatic frequency of MT occurrences in the winter season over the Plateau is not more than 40 %. Based on high resolution data of intensive radiosonde observations, our estimations of MT occurrence over the Plateau can be as high as 80 % during certain winters. This reminds us to pay more attention to the MT events above the Plateau. The influence of the coarse vertical resolution and other effects on the estimation of MT occurrence frequency are also discussed. &lt;br&gt;&lt;br&gt; The stratospheric intruding episodes are generally associated with the presence of subtropical jet stream over the Plateau. The complex structure of dynamic tropopause folding over the Plateau have been reflected by the thermal MT events observed by radiosondes. The intrusion of air masses from the stratosphere may contribute to a higher upper tropospheric ozone concentration in winter than in summer above the plateau

The first knockin mouse model of episodic ataxia type 2

Mechanisms of disease, diagnostics and therap

Taxonomy and epidemiology of Mucor irregularis, agent of chronic cutaneous mucormycosis.

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