Integrating new memories into the hippocampal network activity space

By investigating the topology of neuronal co-activity, we found that mnemonic information spans multiple operational axes in the mouse hippocampus network. High-activity principal cells form the core of each memory along a first axis, segregating spatial contexts and novelty. Low-activity cells join co-activity motifs across behavioral events and enable their crosstalk along two other axes. This reveals an organizational principle for continuous integration and interaction of hippocampal memories

An asteroseismic study of the Delta Scuti star 44 Tau

In this paper we investigate theoretical pulsation models for the delta Scuti star 44 Tau. The star was monitored during several multisite campaigns which confirmed the presence of radial and nonradial oscillations. Moreover, its exceptionally low rotational velocity makes 44 Tau particulary interesting for an asteroseismic study. Due to the measured log g value of 3.6 +/- 0.1, main sequence and post-main sequence models have to be considered. We perform mode identification based on photometric and spectroscopic data. A nonadiabatic pulsation code is used to compute models that fit the identified modes. The influence of different opacity tables and element mixtures on the results is tested. The observed frequencies of 44 Tau can be fitted in both the main sequence and the post-main sequence evolutionary stage. Post-main sequence models are preferable as they fulfill almost all observational constraints (fit of observed frequencies, position in the HRD and instability range). These models can be obtained with normal chemical composition which is in agreement with recent spectroscopic measurements. The efficiency of envelope convection (in the framework of the mixing-length theory) is predicted to be very low in 44 Tau. We show that the results are sensitive to the choice between the OPAL and OP opacities. While the pulsation models of 44 Tau computed with OP opacities are considerably too cool and too faint, the use of OPAL opacities results in models within the expected temperature and luminosity range.Comment: 9 pages, 15 figures, 2 tables, accepted for publication in A&

Multiperiodicity in the newly discovered mid-late Be star V2104 Cygni

We obtained the first long, homogenous time-series of V2104Cyg, consisting of 679 datapoints, with the uvbybeta photometers of Sierra Nevada and San Pedro Martir Observatories with the aim to detect and subsequently interpret the intrinsic frequencies of this previously unstudied variable star, which turned out to be a Be star. We try to figure out its place among the variable B stars on the upper Main Sequence. In order to obtain additional information on physical parameters we collected a few spectra with the ELODIE and FIES instruments. We searched for frequencies in the uvby passbands using 2 different frequency analysis methods and used the S/N>4 criterion to select the significant periodicities. We obtained an estimate of the physical parameters of the underlying B star of spectral type between B5 and B7, by correcting for the presence of a circumstellar disk, using a formalism based on the strenght of the Halpha line emission. We detected 3 independent frequencies with amplitudes below 0.01mag, f1 = 4.7126 c/d, f2 = 2.2342 c/d and f3 = 4.671 c/d, and discovered that V2104Cyg is a Be star. The fast rotation (vsini=290+/-10 km/s, and 27<i<45) hampered the investigation of the associated pulsational parameters l. Nevertheless, the most plausible explanation for the observed variability of this mid-late type Be star is a non-radial pulsation model. This paper is based on observations obtained at the Observatorio Astronomico Nacional San Pedro Martir (Mexico), Observatorio de Sierra Nevada (Spain), Observatoire de Haute Provence (France), and on observations made with the Nordic Optical Telescope, Observatorio Roque de los Muchachos, La Palma, Spain.Comment: 7 pages, 4 figures, A&A accepte

Discovery and application of Frequency Ratio Method to the new multiperiodic gamma Dor star HD 218427

gamma Dor-type oscillations have been discovered in the star HD218427 through simultaneous uvby photometric observations carried out in the year 2003. A few Hbeta-Crawford measurements were also collected for calibration purposes which place this star well-located inside the gamma Dor instability region. Deficiency in metal content, similar to other well-defined gamma Dor stars, is found in HD218427 and the possibility of a lambda Boo nature is discussed. Frequency analysis was carried out for different filters, the combined "vby" filter was also used and five frequencies were found as significant with periods ranging between 0.3 and 0.8 days. The recently developed Frequency Ratio Method is used in order to perform an identification of the excited modes. The results are consistent with an l=2 identification for all the modes and high radial quantum numbers (n~40) for the three main observed periodicities. The possibility of multiplet structures is also discussed. However, no consistency is found when the Time-Dependent Convection treatment is used for modes discrimination. The disagreement can be due to the large rotation velocity taking place in HD218427 and, consequently, the significant coupling between the modes.Comment: 10 pages, 3 figures. Accepted by A&

Interaction Between Convection and Pulsation

This article reviews our current understanding of modelling convection dynamics in stars. Several semi-analytical time-dependent convection models have been proposed for pulsating one-dimensional stellar structures with different formulations for how the convective turbulent velocity field couples with the global stellar oscillations. In this review we put emphasis on two, widely used, time-dependent convection formulations for estimating pulsation properties in one-dimensional stellar models. Applications to pulsating stars are presented with results for oscillation properties, such as the effects of convection dynamics on the oscillation frequencies, or the stability of pulsation modes, in classical pulsators and in stars supporting solar-type oscillations.Comment: Invited review article for Living Reviews in Solar Physics. 88 pages, 14 figure

Multisite spectroscopic seismic study of the beta Cep star V2052 Oph: inhibition of mixing by its magnetic field

We used extensive ground-based multisite and archival spectroscopy to derive observational constraints for a seismic modelling of the magnetic beta Cep star V2052 Ophiuchi. The line-profile variability is dominated by a radial mode (f_1=7.14846 d^{-1}) and by rotational modulation (P_rot=3.638833 d). Two non-radial low-amplitude modes (f_2=7.75603 d^{-1} and f_3=6.82308 d^{-1}) are also detected. The four periodicities that we found are the same as the ones discovered from a companion multisite photometric campaign (Handler et al. 2012) and known in the literature. Using the photometric constraints on the degrees l of the pulsation modes, we show that both f_2 and f_3 are prograde modes with (l,m)=(4,2) or (4,3). These results allowed us to deduce ranges for the mass (M \in [8.2,9.6] M_o) and central hydrogen abundance (X_c \in [0.25,0.32]) of V2052 Oph, to identify the radial orders n_1=1, n_2=-3 and n_3=-2, and to derive an equatorial rotation velocity v_eq \in [71,75] km s^{-1}. The model parameters are in full agreement with the effective temperature and surface gravity deduced from spectroscopy. Only models with no or mild core overshooting (alpha_ov \in [0,0.15] local pressure scale heights) can account for the observed properties. Such a low overshooting is opposite to our previous modelling results for the non-magnetic beta Cep star theta Oph having very similar parameters, except for a slower surface rotation rate. We discuss whether this result can be explained by the presence of a magnetic field in V2052 Oph that inhibits mixing in its interior.Comment: 12 pages, 6 figures and 5 tables; accepted for publication in MNRAS on 2012 August 1

Finding motif pairs in the interactions between heterogeneous proteins via bootstrapping and boosting

<p>Abstract</p> <p>Background</p> <p>Supervised learning and many stochastic methods for predicting protein-protein interactions require both negative and positive interactions in the training data set. Unlike positive interactions, negative interactions cannot be readily obtained from interaction data, so these must be generated. In protein-protein interactions and other molecular interactions as well, taking all non-positive interactions as negative interactions produces too many negative interactions for the positive interactions. Random selection from non-positive interactions is unsuitable, since the selected data may not reflect the original distribution of data.</p> <p>Results</p> <p>We developed a bootstrapping algorithm for generating a negative data set of arbitrary size from protein-protein interaction data. We also developed an efficient boosting algorithm for finding interacting motif pairs in human and virus proteins. The boosting algorithm showed the best performance (84.4% sensitivity and 75.9% specificity) with balanced positive and negative data sets. The boosting algorithm was also used to find potential motif pairs in complexes of human and virus proteins, for which structural data was not used to train the algorithm. Interacting motif pairs common to multiple folds of structural data for the complexes were proven to be statistically significant. The data set for interactions between human and virus proteins was extracted from BOND and is available at <url>http://virus.hpid.org/interactions.aspx</url>. The complexes of human and virus proteins were extracted from PDB and their identifiers are available at <url>http://virus.hpid.org/PDB_IDs.html</url>.</p> <p>Conclusion</p> <p>When the positive and negative training data sets are unbalanced, the result via the prediction model tends to be biased. Bootstrapping is effective for generating a negative data set, for which the size and distribution are easily controlled. Our boosting algorithm could efficiently predict interacting motif pairs from protein interaction and sequence data, which was trained with the balanced data sets generated via the bootstrapping method.</p

The binary properties of the pulsating subdwarf B eclipsing binary PG 1336-018 (NY Virginis)

Aims. We present an unbiased orbit solution and mass determination of the components of the eclipsing binary PG1336−018 as a critical test for the formation scenarios of subdwarf B stars. Methods. We obtained high-resolution time series VLT/UVES spectra and high-speed multicolour VLT/ULTRACAM photometric observations of PG1336−018, a rapidly pulsating subdwarf B star in a short period eclipsing binary. Results. Combining the radial velocity curve obtained from the VLT/UVES spectra with the VLT/ULTRACAM multicolour lightcurves, we determined numerical orbital solutions for this eclipsing binary. Due to the large number of free parameters and their strong correlations, no unique solution could be found, only families of solutions. We present three solutions of equal statistical significance, two of which are compatible with the primary having gone through a core He-flash and a common-envelope phase described by the α-formalism. These two models have an sdB primary of 0.466 M and 0.389 M, respectively. Finally, we report the detection of the Rossiter-McLaughlin effect for PG1336−018

A new rhynchocephalian from the late jurassic of Germany with a dentition that is unique amongst tetrapods.

Rhynchocephalians, the sister group of squamates (lizards and snakes), are only represented by the single genus Sphenodon today. This taxon is often considered to represent a very conservative lineage. However, rhynchocephalians were common during the late Triassic to latest Jurassic periods, but rapidly declined afterwards, which is generally attributed to their supposedly adaptive inferiority to squamates and/or Mesozoic mammals, which radiated at that time. New finds of Mesozoic rhynchocephalians can thus provide important new information on the evolutionary history of the group. A new fossil relative of Sphenodon from the latest Jurassic of southern Germany, Oenosaurus muehlheimensis gen. et sp. nov., presents a dentition that is unique amongst tetrapods. The dentition of this taxon consists of massive, continuously growing tooth plates, probably indicating a crushing dentition, thus representing a previously unknown trophic adaptation in rhynchocephalians. The evolution of the extraordinary dentition of Oenosaurus from the already highly specialized Zahnanlage generally present in derived rhynchocephalians demonstrates an unexpected evolutionary plasticity of these animals. Together with other lines of evidence, this seriously casts doubts on the assumption that rhynchocephalians are a conservative and adaptively inferior lineage. Furthermore, the new taxon underlines the high morphological and ecological diversity of rhynchocephalians in the latest Jurassic of Europe, just before the decline of this lineage on this continent. Thus, selection pressure by radiating squamates or Mesozoic mammals alone might not be sufficient to explain the demise of the clade in the Late Mesozoic, and climate change in the course of the fragmentation of the supercontinent of Pangaea might have played a major role

A realistic example of chaotic tunneling: The hydrogen atom in parallel static electric and magnetic fields

Statistics of tunneling rates in the presence of chaotic classical dynamics is discussed on a realistic example: a hydrogen atom placed in parallel uniform static electric and magnetic fields, where tunneling is followed by ionization along the fields direction. Depending on the magnetic quantum number, one may observe either a standard Porter-Thomas distribution of tunneling rates or, for strong scarring by a periodic orbit parallel to the external fields, strong deviations from it. For the latter case, a simple model based on random matrix theory gives the correct distribution.Comment: Submitted to Phys. Rev.