A Multiscale Mapping Assessment of Lake Champlain Cyanobacterial Harmful Algal Blooms

Lake Champlain has bays undergoing chronic cyanobacterial harmful algal blooms that pose a public health threat. Monitoring and assessment tools need to be developed to support risk decision making and to gain a thorough understanding of bloom scales and intensities. In this research application, Landsat 8 Operational Land Imager (OLI), Rapid Eye, and Proba Compact High Resolution Imaging Spectrometer (CHRIS) images were obtained while a corresponding field campaign collected in situ measurements of water quality. Models including empirical band ratio regressions were applied to map chlorophylla and phycocyanin concentrations; all sensors performed well with R² and root-mean-square error (RMSE) ranging from 0.76 to 0.88 and 0.42 to 1.51, respectively. The outcomes showed spatial patterns across the lake with problematic bays having phycocyanin concentrations \u3e25 μg/L. An alert status metric tuned to the current monitoring protocol was generated using modeled water quality to illustrate how the remote sensing tools can inform a public health monitoring system. Among the sensors utilized in this study, Landsat 8 OLI holds the most promise for providing exposure information across a wide area given the resolutions, systematic observation strategy and free cost

Comparison between Dense L-Band and C-Band Synthetic Aperture Radar (SAR) Time Series for Crop Area Mapping over a NISAR Calibration-Validation Site

Crop area mapping is important for tracking agricultural production and supporting food security. Spaceborne approaches using synthetic aperture radar (SAR) now allow for mapping crop area at moderate spatial and temporal resolutions. Multi-frequency SAR data is highly useful for crop monitoring because backscatter response from vegetation canopies is wavelength dependent. This study evaluates the utility of C-band Sentinel-1B (Sentinel-1) and L-band ALOS-2 (PALSAR) data, collected during the 2019 growing season, for generating accurate active crop extent (crop vs. non-crop) classifications over an agricultural region in western Canada. Evaluations were performed against the Agriculture and Agri-Food Canada satellite-based Annual Cropland Inventory (ACI), an open data product that maps land cover across the extent of Canada’s agricultural land. Classifications were performed using the temporal coefficient of variation (CV) approach, where an optimal crop/non-crop delineating CV threshold (CVthr) is selected according to Youden’s J-statistic. Results show that crop area mapping agreed better with the ACI when using Sentinel-1 data (83.5%) compared to PALSAR (73.2%). Analysis of performance by crop reveals that PALSAR’s poorer performance can be attributed to soybean, urban, grassland, and pasture ACI classes. This study also compared CV values to in situ wet biomass data for canola and soybeans, showing that crops with lower biomass (soybean) had correspondingly lower CV value

Evaluation of Hyperspectral Indices for Chlorophyll-a Concentration Estimation in Tangxun Lake (Wuhan, China)

Chlorophyll-a (Chl-a) concentration is a major indicator of water quality which is harmful to human health. A growing number of studies have focused on the derivation of Chl-a concentration information from hyperspectral sensor data and the identification of best indices for Chl-a monitoring. The objective of this study is to assess the potential of hyperspectral indices to detect Chl-a concentrations in Tangxun Lake, which is the second largest lake in Wuhan, Central China. Hyperspectral reflectance and Chl-a concentration were measured at ten sample sites in Tangxun Lake. Three types of hyperspectral methods, including single-band reflectance, first derivative of reflectance, and reflectance ratio, were extracted from the spectral profiles of all bands of the hyperspectral sensor. The most appropriate bands for algorithms mentioned above were selected based on the correlation analysis. Evaluation results indicated that two methods, the first derivative of reflectance and reflectance ratio, were highly correlated (R2 > 0.8) with the measured Chl-a concentrations. Thus, the spatial and temporal variations of Chl-a concentration could be conveniently monitored with these hyperspectral methods

Fusing optical and SAR time series for LAI gap filling with multioutput Gaussian processes

The availability of satellite optical information is often hampered by the natural presence of clouds, which can be problematic for many applications. Persistent clouds over agricultural fields can mask key stages of crop growth, leading to unreliable yield predictions. Synthetic Aperture Radar (SAR) provides all-weather imagery which can potentially overcome this limitation, but given its high and distinct sensitivity to different surface properties, the fusion of SAR and optical data still remains an open challenge. In this work, we propose the use of Multi-Output Gaussian Process (MOGP) regression, a machine learning technique that learns automatically the statistical relationships among multisensor time series, to detect vegetated areas over which the synergy between SAR-optical imageries is profitable. For this purpose, we use the Sentinel-1 Radar Vegetation Index (RVI) and Sentinel-2 Leaf Area Index (LAI) time series over a study area in north west of the Iberian peninsula. Through a physical interpretation of MOGP trained models, we show its ability to provide estimations of LAI even over cloudy periods using the information shared with RVI, which guarantees the solution keeps always tied to real measurements. Results demonstrate the advantage of MOGP especially for long data gaps, where optical-based methods notoriously fail. The leave-one-image-out assessment technique applied to the whole vegetation cover shows MOGP predictions improve standard GP estimations over short-time gaps (R 2 of 74% vs 68%, RMSE of 0.4 vs 0.44 [m 2 m −2 ]) and especially over long-time gaps (R 2 of 33% vs 12%, RMSE of 0.5 vs 1.09 [m 2 m −2 ])

Warming of Central European lakes and their response to the 1980s climate regime shift

Lake surface water temperatures (LSWTs) are sensitive to atmospheric warming and have previously been shown to respond to regional changes in the climate. Using a combination of in situ and simulated surface temperatures from 20 Central European lakes, with data spanning between 50 and ∼100 years, we investigate the long-term increase in annually averaged LSWT. We demonstrate that Central European lakes are warming most in spring and experience a seasonal variation in LSWT trends. We calculate significant LSWT warming during the past few decades and illustrate, using a sequential t test analysis of regime shifts, a substantial increase in annually averaged LSWT during the late 1980s, in response to an abrupt shift in the climate. Surface air temperature measurements from 122 meteorological stations situated throughout Central Europe demonstrate similar increases at this time. Climatic modification of LSWT has numerous consequences for water quality and lake ecosystems. Quantifying the response of LSWT increase to large-scale and abrupt climatic shifts is essential to understand how lakes will respond in the future

Evaluating Principal Components Analysis for Identifying Optimal Bands Using Wetland Hyperspectral Measurements From the Great Lakes, USA

Mapping species composition is a focus of the wetland science community as this information will substantially enhance assessment and monitoring abilities. Hyperspectral remote sensing has been utilized as a cost-efficient approach. While hyperspectral instruments can record hundreds of contiguous narrow bands, much of the data are redundant and/or provide no increase in utility for distinguishing objects. Knowledge of the optimal bands allows users to efficiently focus on bands that provide the most information and several data reduction tools are available. The objective of this Communication was to evaluate Principal Components Analysis (PCA) for identifying optimal bands to discriminate wetland plant species. In-situ hyperspectral reflectance measurements were obtained for thirty-five species in two diverse Great Lakes wetlands. PCA was executed on a suite of categories based on botanical plant/substrate characteristics and spectral configuration schemes. Results showed that the data dependency of PCA makes it a poor, stand alone tool for selecting optimal wavelengths. PCA does not allow diagnostic comparison across sites and wavelengths identified by PCA do not necessarily represent wavelengths that indicate biophysical attributes of interest. Further, narrow bands captured by hyperspectral sensors need to be substantially re-sampled and/or smoothed in order for PCA to identify useful information

Fusion of Moderate Resolution Earth Observations for Operational Crop Type Mapping

Crop type inventory and within season estimates at moderate (<30 m) resolution have been elusive in many regions due to the lack of temporal frequency, clouds, and restrictive data policies. New opportunities exist from the operational fusion of Landsat-8 Operational Land Imager (OLI), Sentinel-2 (A & B), and Sentinel-1 (A & B) which provide more frequent open access observations now that these satellites are fully operating. The overarching goal of this research application was to compare Harmonized Landsat-8 Sentinel-2 (HLS), Sentinel-1 (S1), and combined radar and optical data in an operational, near-real-time (within 24 h) context. We evaluated the ability of these Earth observations (EO) across major crops in four case study regions in United States (US) production hot spots. Hindcast time series combinations of these EO were fed into random forest classifiers trained with crop cover type information from the Cropland Data Layer (CDL) and ancillary ground truth. The outcomes show HLS achieved high (>85%) accuracies and the ability to provide insight on crop location and extent within the crop season. HLS fused with S1 had, at times, a higher accuracy (5–10% relative overall accuracy and kappa increases) within season although the combination of fused data was minimal at times, crop dependent, and the accuracies tended to converge by harvest. In cloud prone regions and certain temporal periods, S1 performed well overall. The growth in the availability of time dense moderate resolution data streams and different sensitivities of optical and radar data provide a mechanism for within season crop mapping and area estimates that can help improve food security

Evaluating Principal Components Analysis for Identifying Optimal Bands Using Wetland Hyperspectral Measurements From the Great Lakes, USA

Mapping species composition is a focus of the wetland science community as this information will substantially enhance assessment and monitoring abilities. Hyperspectral remote sensing has been utilized as a cost-efficient approach. While hyperspectral instruments can record hundreds of contiguous narrow bands, much of the data are redundant and/or provide no increase in utility for distinguishing objects. Knowledge of the optimal bands allows users to efficiently focus on bands that provide the most information and several data reduction tools are available. The objective of this Communication was to evaluate Principal Components Analysis (PCA) for identifying optimal bands to discriminate wetland plant species. In-situ hyperspectral reflectance measurements were obtained for thirty-five species in two diverse Great Lakes wetlands. PCA was executed on a suite of categories based on botanical plant/substrate characteristics and spectral configuration schemes. Results showed that the data dependency of PCA makes it a poor, stand alone tool for selecting optimal wavelengths. PCA does not allow diagnostic comparison across sites and wavelengths identified by PCA do not necessarily represent wavelengths that indicate biophysical attributes of interest. Further, narrow bands captured by hyperspectral sensors need to be substantially re-sampled and/or smoothed in order for PCA to identify useful information