6 research outputs found
The Chern-Simons current in systems of DNA-RNA transcriptions
A Chern-Simons current, coming from ghost and anti-ghost fields of
supersymmetry theory, can be used to define a spectrum of gene expression in
new time series data where a spinor field, as alternative representation of a
gene, is adopted instead of using the standard alphabet sequence of bases . After a general discussion on the use of supersymmetry in
biological systems, we give examples of the use of supersymmetry for living
organism, discuss the codon and anti-codon ghost fields and develop an
algebraic construction for the trash DNA, the DNA area which does not seem
active in biological systems. As a general result, all hidden states of codon
can be computed by Chern-Simons 3 forms. Finally, we plot a time series of
genetic variations of viral glycoprotein gene and host T-cell receptor gene by
using a gene tensor correlation network related to the Chern-Simons current. An
empirical analysis of genetic shift, in host cell receptor genes with separated
cluster of gene and genetic drift in viral gene, is obtained by using a tensor
correlation plot over time series data derived as the empirical mode
decomposition of Chern-Simons current.Comment: 45 pages, 30 figures, 2 table