半導体産業とそのR&D―発展と変容―

早稲田大学創立125周年記念シンポジウム 半導体・ナノエレクトロニクス―技術立国日本のこれから― 2007年10月23日 早稲田大学国際会議場井深大記念ホー

Effect of phosphorylation on the structure and fold of transactivation domain of p53

Several phosphorylations are known to occur in the N-terminal transactivation domain of human p53. To explore the structural effects of these phosphorylations, we have chemically synthesized the unphosphorylated p53-(1-39) and its three phosphorylated analogs, phosphorylated at Ser-15, Thr-18, and Ser-20. p53-(1-39) and its Ser-15 and Thr-18 phosphorylated analogs were tested for interaction with p300. The order of binding affinities was similar to that derived from biochemical experiments with the whole protein, indicating functional integrity of the domain. Differences in chemical shifts and coupling constants indicate significant structural changes upon phosphorylations. The single tryptophan in the unphosphorylated domain has an emission maximum and a Stern-Volmer constant that are characteristics of tryptophans situated in protein interiors. The diffusion constant is monomer-like, with an axial ratio of 1:7.5, indicating a significant degree of compaction. Upon phosphorylations, the emission maximum and diffusion constant change significantly toward values that indicate more open conformations. Binding of the hydrophobic probe bis-1-anilino-8-naphthalenesulfonate to the unphosphorylated and one of the phosphorylated domains is also significantly different, suggesting different conformations. We propose that phosphorylations switch the largely folded transactivation domain to more open conformations that interact with transcription factors such as p300/cAMP- responsive element-binding protein-binding protein, leading to enhancement of gene expression

GESTÃO PÚBLICA AMBIENTAL: A APLICAÇÃO DA LEI 12.305/10 NOS MUNICÍPIOS DE MAIOR POPULAÇÃO DO ESTADO DO PARANÁ

O presente artigo foi motivado pela necessidade da intervenção do Poder Público nas questões ambientais, em especial na gestão de resíduos sólidos, através da coleta, destinação e reaproveitamento do material, sejam recicláveis ou orgânicos. A Lei 12.305/10 dispõe sobre a Política Nacional de Resíduos Sólidos, a qual apresenta a importância da participação de toda a população, responsabilizando desde os geradores de resíduos até o poder público no caso de não cumprimento da lei. Aos Estados e Municípios, cabe a elaboração de planos estadual e municipal de gerenciamento de resíduos sólidos. O artigo é de ordem qualitativa, descritiva e utilizado referencial bibliográfico. Esta pesquisa priorizou a busca de informações sobre a adequação dos municípios à Lei 12.305/10, e foi delimitada às 10 cidades de maior população do Estado do Paraná, com levantamento dos principais itens dos planos municipais, através de informações oficiais das Prefeituras, Secretarias Municipais de Meio Ambiente, Secretaria Estadual de Meio Ambiente, bem como dados coletados de órgãos de imprensa

Photoreceptor spectral sensitivities of the Small White butterfly Pieris rapae crucivora interpreted with optical modeling

The compound eye of the Small White butterfly, Pieris rapae crucivora, has four classes of visual pigments, with peak absorption in the ultraviolet, violet, blue and green, but electrophysiological recordings yielded eight photoreceptors classes: an ultraviolet, violet, blue, double-peaked blue, green, blue-suppressed-green, pale-red and deep-red class. These photoreceptor classes were identified in three types of ommatidia, distinguishable by the different eye shine spectra and fluorescence; the latter only being present in the eyes of males. We present here two slightly different optical models that incorporate the various visual pigments, the light-filtering actions of the fluorescent, pale-red and deep-red screening pigment, located inside or adjacent to the rhabdom, and the reflectance spectrum of the tapetum that abuts the rhabdom proximally. The models serve to explain the photoreceptor spectral sensitivities as well as the eye shine

Adaptations for nocturnal vision in insect apposition eyes

Due to our own preference for bright light, we tend to forget that many insects are active in very dim light. The reasons for nocturnal activity are most easily seen in tropical areas of the world, where animals face severe competition for food and nocturnal insects are able to forage in a climate of reduced competition and predation. Generally nocturnal insects possess superposition compound eyes. This eye design is truly optimized for dim light as photons can be gathered through large apertures comprised of hundreds of lenses. In apposition eyes, on the other hand, the aperture consists of a single lens resulting in a poor photon catch and unreliable vision in dim light. Apposition eyes are therefore typically found in day-active insects and according to theoretical calculations should render bees blind by mid dusk. Nevertheless, the tropical bee Megalopta genalis and the wasp Apoica pallens have managed the transition to a nocturnal lifestyle while retaining their highly unsuitable apposition eye design. Far from being blind, these bees and wasps forage at extremely low light intensities. Moreover, M. genalis is the first insect shown to use landmark navigation at light intensities less than starlight. How do their apposition eyes permit such complex visual behaviour in so little light? Optical adaptations can significantly enhance sensitivity in apposition eyes. In bees and wasps, the major effect comes from their extremely wide photoreceptors, which are able to trap light reaching the eye from a large visual angle. These optical adaptations lead to a 30-fold increase in sensitivity compared to diurnal bees and wasps. This however is not sufficient for the 8 log units difference in light intensity between day and night. Our hypothesis is that neural adaptations in the form of spatial and temporal summation must be involved. By means of spatial summation the eyes could sum signals from large groups of visual units (ommatidia), in order to improve sensitivity at the cost of coarser spatial resolution. In nocturnal bees, spatial summation could be mediated via their wide laterally-spreading first-order interneurons (L-fibres) present in the first optic ganglion (lamina). These L-fibres have significantly larger dendritic fields than equivalent neurons in diurnal bees and the potential to sum photons from up to 18 visual units. Theoretical modelling further supports this hypothesis, as the optimal dendritic field size predicted by the model agrees well with the anatomical data

Complementarity of Δ opioid ligand pharmacophore and receptor models

The elaboration of a pharmacophore model for the Δ opioid receptor selective ligand JOM-13 (Tyr–c[ D -Cys–Phe– D -Pen]OH) and the parallel, independent development of a structural model of the Δ receptor are summarized. Although the backbone conformation of JOM-13's tripeptide cycle is well defined, considerable conformational lability is evident in the Tyr 1 residue and in the Phe 3 side chain, key pharmacophore elements of the ligand. Replacement of these flexible features of the ligand by more conformationally restricted analogues and subsequent correlation of receptor binding and conformational properties allowed the number of possible binding conformations of JOM-13 to be reduced to two. Of these, one was chosen as more likely, based on its better superposition with other conformationally constrained Δ receptor ligands. Our model of the Δ opioid receptor, constructed using a general approach that we have developed for all rhodopsin-like G protein-coupled receptors, contains a large cavity within the transmembrane domain that displays excellent complementarity in both shape and polarity to JOM-13 and other Δ ligands. This binding pocket, however, cannot accommodate the conformer of JOM-13 preferred from analysis of ligands, alone. Rather, only the “alternate” allowed conformer, identified from analysis of the ligands but “disfavored” because it does not permit simultaneous superposition of all pharmacophore elements of JOM-13 with other Δ ligands, fits the binding site. These results argue against a simple view of a single, common fit to a receptor binding site and suggest, instead, that at least some binding site interactions of different ligands may differ. © 2000 John Wiley & Sons, Inc. Biopoly 51: 426–439, 1999Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/34323/1/5_ftp.pd

Localization of orphanin FQ (nociceptin) peptide and messenger RNA in the central nervous system of the rat

Orphanin FQ (OFQ) is the endogenous agonist of the opioid receptor-like receptor (ORL-1). It and its precursor, prepro-OFQ, exhibit structural features suggestive of the opioid peptides. A cDNA encoding the OFQ precursor sequence in the rat recently has been cloned, and the authors recently generated a polyclonal antibody directed against the OFQ peptide. In the present study, the authors used in situ hybridization and immunohistochemistry to examine the distribution of OFQ peptide and mRNA in the central nervous system of the adult rat. OFQ immunoreactivity and prepro-OFQ mRNA expression correlated virtually in all brain areas studied. In the forebrain, OFQ peptide and mRNA were prominent in the neocortex endopiriform nucleus, claustrum, lateral septum, ventral forebrain, hypothalamus, mammillary bodies, central and medial nuclei of the amygdala, hippocampal formation, paratenial and reticular nuclei of the thalamus, medial habenula, and zona incerta. No OFQ was observed in the pineal or pituitary glands. In the brainstem, OFQ was prominent in the ventral tegmental area, substantia nigra, nucleus of the posterior commissure, central gray, nucleus of Darkschewitsch, peripeduncular nucleus, interpeduncular nucleus, tegmental nuclei, locus coeruleus, raphe complex, lateral parabrachial nucleus, inferior olivary complex, vestibular nuclear complex, prepositus hypoglossus, solitary nucleus, nucleus ambiguous, caudal spinal trigeminal nucleus, and reticular formation. In the spinal cord, OFQ was observed throughout the dorsal and ventral horns. The wide distribution of this peptide provides support for its role in a multitude of functions, including not only nociception but also motor and balance control, special sensory processing, and various autonomic and physiologic processes. J. Comp. Neurol. 406:503–547, 1999. © 1999 Wiley-Liss, Inc.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/34452/1/7_ftp.pd