Habitat colonisation by amphipods : comparison between native and alien algae

Invasion of algal habitat by the alien alga Caulerpa racemosa results in changes to habitat structure, part of which may be due to accumulation of large amounts of detritus. In turn, such changes lead to alterations in the assemblage structure of associated invertebrates. The present study was aimed at testing the hypotheses that (i) invasion by C. racemosa will influence the assemblage structure of amphipods associated with vegetated habitats, since colonisation by the invertebrates will differ between native algal habitat and habitat invaded by the alien alga, and (ii) differences in colonisation are mainly due to accumulation of detritus by the alien alga. To test these hypotheses, field experiments on habitat colonisation were undertaken at two sites within each of two Mediterranean localities (Malta and Spain). Using mesh bags, 3 different habitats were introduced at each site: habitat with the native alga Halopteris scoparia, habitat with C. racemosa, and an artificial habitat resembling algal habitat. Additionally, empty mesh bags were deployed as controls. Mesh bags containing plant material were defaunated prior to deployment. For each of the three habitat types, three supplement treatments were used: (i) no detritus, (ii) low detritus, and (ii) high detritus. The bags were placed on a rocky substratum at a water depth of 4.5–5 m for a period of 14 days, after which they were collected and the amphipod assemblage was assessed. The results showed that, overall, amphipod species richness and abundance were higher in bags containing H. scoparia but some amphipods exhibited a broad capability to colonize new habitat such as C. racemosa. Accumulation of detritus by the alien alga may play an important role but small-scale physical or biological habitat features can affect its ecological role.peer-reviewe

An Ecosystem Approach to the Role of Fish Farming in Coastal Areas

Coastal ecosystems put up most of the impacts from human activities in the sea. Generally, assessment based on a unispecific ecological group and/or habitat reflects only a fraction of what is happening in the ecosystem, and usually it is biased by the spatial and temporal variability at small scales. This is more evident when several human activities co-exist in the same area and interact synergically among them and with the natural structure and dynamics of the ecosystem. An ecosystemic assessment can combine several ecological groups, habitats, processes and/or activities, and offer a more holistic picture about the structure and dynamics of the considered coastal area.This study was partially funded by Spanish Ministry of Science Grant (Project FATFISH CTM2009-14362-C02-01). JTBS thanks to Conselleria d'Educació, Generalitat Valenciana, for financing the visit to La Paz during 2012. FAS thanks support to visit the University of Alicante during 2013

Seasonal patterns and diets of wild fish assemblages associated with Mediterranean coastal fish farms

Fish are attracted to floating structures, including coastal cage fish farms, sometimes in dense aggregations. To understand better the influence of aquaculture on wild fish stocks, we carried out seasonal visual censuses around three southwestern Mediterranean farms over 2 years to assess the temporal patterns of the aggregated fish assemblage. In addition, we analysed the diet of the five most abundant species. Aggregations around all farms were large throughout the year, although species composition and abundance differed among farms and seasons. Fish farms are attractive habitats for certain species of wild fish in specific seasons. Adult fish of reproductive size dominated the assemblages, and stomach content analysis revealed that 66–89% of fish of the five most abundant taxa had consumed food pellets lost from the cages. We estimated that wild fish consume up to 10% of the pellets used at farms, indicating that food is a key attractant. Regional monitoring of farm-associated wild fish assemblages could aid management of the interaction of aquaculture and wild fish resources, because changes in feeding behaviour may have consequences for fish populations and local fisheries.The study forms part of the ACUFISH project (Unidad de Biología Marina, University of Alicante) and was funded by Spanish Ministry of Science grant MYCT-REN2003-00794

Coastal aquaculture and conservation can work together

Current fishing practices are regarded as unsustainable (Pauly et al. 2002), yet our appetite for seafood grows. To meet the growing gap, there are increasing calls for mankind to tame the oceans through aquaculture (Marra 2005). Close to the coast, rapid expansion of marine aquaculture is underway throughout the world. Sea cages enclose 2.5 million tons of fish, while 12 million tons of mussels, oysters and clams hang from floating ropes or grow on racks or trays (FAO 2004). Aquaculture structures are now ubiquitous to many coastlines. As the expansion continues, how can we best manage the interaction between natural communities and aquaculture

Deletion of the Zinc Transporter Lipoprotein AdcAII Causes Hyperencapsulation of Streptococcus pneumoniae Associated with Distinct Alleles of the Type I Restriction-Modification System.

The capsule is the dominant Streptococcus pneumoniae virulence factor, yet how variation in capsule thickness is regulated is poorly understood. Here, we describe an unexpected relationship between mutation of adcAII, which encodes a zinc uptake lipoprotein, and capsule thickness. Partial deletion of adcAII in three of five capsular serotypes frequently resulted in a mucoid phenotype that biochemical analysis and electron microscopy of the D39 adcAII mutants confirmed was caused by markedly increased capsule thickness. Compared to D39, the hyperencapsulated ΔadcAII mutant strain was more resistant to complement-mediated neutrophil killing and was hypervirulent in mouse models of invasive infection. Transcriptome analysis of D39 and the ΔadcAII mutant identified major differences in transcription of the Sp_0505-0508 locus, which encodes an SpnD39III (ST5556II) type I restriction-modification system and allelic variation of which correlates with capsule thickness. A PCR assay demonstrated close linkage of the SpnD39IIIC and F alleles with the hyperencapsulated ΔadcAII strains. However, transformation of ΔadcAII with fixed SpnD39III alleles associated with normal capsule thickness did not revert the hyperencapsulated phenotype. Half of hyperencapsulated ΔadcAII strains contained the same single nucleotide polymorphism in the capsule locus gene cps2E, which is required for the initiation of capsule synthesis. These results provide further evidence for the importance of the SpnD39III (ST5556II) type I restriction-modification system for modulating capsule thickness and identified an unexpected linkage between capsule thickness and mutation of ΔadcAII Further investigation will be needed to characterize how mutation of adcAII affects SpnD39III (ST5556II) allele dominance and results in the hyperencapsulated phenotype.IMPORTANCE The Streptococcus pneumoniae capsule affects multiple interactions with the host including contributing to colonization and immune evasion. During infection, the capsule thickness varies, but the mechanisms regulating this are poorly understood. We have identified an unsuspected relationship between mutation of adcAII, a gene that encodes a zinc uptake lipoprotein, and capsule thickness. Mutation of adcAII resulted in a striking hyperencapsulated phenotype, increased resistance to complement-mediated neutrophil killing, and increased S. pneumoniae virulence in mouse models of infection. Transcriptome and PCR analysis linked the hyperencapsulated phenotype of the ΔadcAII strain to specific alleles of the SpnD39III (ST5556II) type I restriction-modification system, a system which has previously been shown to affect capsule thickness. Our data provide further evidence for the importance of the SpnD39III (ST5556II) type I restriction-modification system for modulating capsule thickness and identify an unexpected link between capsule thickness and ΔadcAII, further investigation of which could further characterize mechanisms of capsule regulation

Crossover from spin accumulation into interface states to spin injection in the germanium conduction band

Electrical spin injection into semiconductors paves the way for exploring new phenomena in the area of spin physics and new generations of spintronic devices. However the exact role of interface states in spin injection mechanism from a magnetic tunnel junction into a semiconductor is still under debate. In this letter, we demonstrate a clear transition from spin accumulation into interface states to spin injection in the conduction band of $n$-Ge. We observe spin signal amplification at low temperature due to spin accumulation into interface states followed by a clear transition towards spin injection in the conduction band from 200 K up to room temperature. In this regime, the spin signal is reduced down to a value compatible with spin diffusion model. More interestingly, we demonstrate in this regime a significant modulation of the spin signal by spin pumping generated by ferromagnetic resonance and also by applying a back-gate voltage which are clear manifestations of spin current and accumulation in the germanium conduction band.Comment: 5 pages, 4 figure

Monitoring the influence of marine aquaculture on wild fish communities: benefits and limitations of fatty acid profiles

Fatty acids (FA) have been applied as indicators of the influence of coastal sea-cage fish farming on wild fish communities in several recent scientific publications. Due to the relatively high conservation of FA composition throughout the food web, they are useful for characterizing trophic relationships. The increasing utilization of vegetable or alternative animal oils in the production of aquafeeds results in cultivated fish exhibiting higher levels of terrestrial FAs in their tissues. As previously reported, wild fish ubiquitously aggregate around fish farms as a consequence of the introduction of new habitat and the easy availability of food—fish farms act as enhanced fish aggregation devices (FADs). The influence of food pellets on the composition of wild fish has been detected in recent studies on salmon, sea bass and sea bream aquaculture, with increased levels of linoleic acid (18:2n-6) and a low n-3/n-6 ratio as clear indicators of the consumption of food pellets from the farms. The potential ecological and physiological effects on wild fish are presently unknown. In the present article, guidelines are proposed for the investigation and use of terrestrial FAs to track the effects of coastal aquaculture on wild fish communities and local fisheries, as well as the benefits or limitations of this technique

Density dependence in marine protected populations: a review

The cessation or reduction of fishing in marine protected areas (MPAs) should promote an increase in abundance and mean size and age of previously exploited populations. Thus density-dependent changes in life-history characteristics should occur when populations are allowed to recover in MPAs. In this review, we synthesize the existing information on resource limitation in marine ecosystems, density-dependent changes in life-history traits of exploited populations and evidence for biomass export from MPAs. Most evidence for compensatory changes in biological variables has been derived from observations on populations depleted by high fishing mortality or on strong year classes, but these changes are more evident in juveniles than in adults and in freshwater rather than in marine systems. It is unclear if adults of exploited marine populations are resource limited. This may suggest that exploited populations are controlled mainly by density-independent processes, which could be a consequence of the depleted state of most exploited populations. MPAs could be a useful tool for testing these hypotheses. If we assume that resources become limiting inside MPAs, it is plausible that, if suitable habitats exist, mobile species will search for resources outside of the MPAs, leading to export of biomass to areas which are fished. However, it is not possible to establish from the available data whether this export will be a response to resource limitation inside the MPAs, the result of random movements across MPA boundaries or both. We discuss the implications of this process for the use of MPAs as fisheries management tools.Financial support was provided by the EU CEC DGXII – MAST III contract number: MAS3-ct97-0155

Revisión de los efectos de la protección en las áreas marinas protegidas: conocimiento y deficiencias actuales

This work was carried out with financial support from the Commission of the European Community, specific RTD program 'Specific Support to Policies', SSP–2003–006539 'European Marine Protected Areas as Tools for Fisheries Management and Conservation (EMPAFISH)'.The effectiveness of marine protected areas (MPAs) and the conservation of marine environments must be based on reliable information on the quality of the marine environment that can be obtained in a reasonable timeframe. We reviewed studies that evaluated all aspects related to the effectiveness of MPAs in order to describe how the studies were conducted and to detect fields in which research is lacking. Existing parameters used to evaluate the effectiveness of MPAs are summarised. Two–hundred and twenty–two publications were reviewed. We identified the most commonly used study subjects and methodological approaches. Most of the studies concentrated on biological parameters. Peer reviewed studies were based on control vs. impact design. BACI and mBACI designs were used in very few studies. Through this review, we have identified gaps in the objectives assigned to MPAs and the way in which they have been evaluated. We suggest some guidelines aimed at improving the assessment of the effects of protection in MPAs.La efectividad de las áreas marinas protegidas (AMPs) y la conservación del medio ambiente marino debe basarse en información fiable sobre la calidad del medio marino que pueda obtenerse en un plazo de tiempo razonable. Se revisaron estudios que evalúan aspectos relacionados con la efectividad de las AMPs con el fin de describir cómo se realizaron los estudios y detectar donde existen vacíos en la investigación. En este estudio se enumeran los parámetros existentes para evaluar la efectividad de las AMPs. Se revisaron 224 publicaciones. Identificamos los objetos de estudio más utilizados y los enfoques metodológicos. La mayoría de los estudios se centran en el estudio de parámetros biológicos. Los estudios publicados se basaron en el diseño control frente a impacto. En muy pocos estudios se utilizaron diseños de muestreo BACI y mBACI. A través de esta revisión, se han identificado deficiencias en los objetivos de las AMPs y en la manera como han sido evaluados. Como conclusión sugerimos algunas pautas para mejorar la evaluación de los efectos de la protección en estas zonas