Visions for small-scale renewable energy production on Finnish farms – A Delphi study on the opportunities for new business

The processes of molt and reproduction, and the overlap of the two during a bird's life, are practically unstudied in most tropical environments in South America, especially in Peruvian Amazonia. Our study contributes to understanding these processes in this Neotropical region by analyzing data on molt and reproduction of the understory avifauna and their relationship to different biotic environmental (flowering and fruiting) and abiotic factors (precipitation, temperature) during one year in the Allpahuayo Mishana National Reserve in northeastern Peru. A total of 1556 individuals, belonging to 108 species, were captured, of which 847 were molting. Likewise, only 89 individuals were found with a fully vascularized brood patch. However, the level of overlap with molting was high, as a total of 44 (49%) of the birds with a brood patch were also molting primaries. We found that both molt and reproduction occurred throughout the year, with peaks in June-July (the less rainy season) and October-November (the beginning of the rainy season). There was a positive correlation between molt and breeding, and a negative correlation between the presence of juveniles and the fruiting of woody plants. However, we found no statistically significant correlation of molt or reproduction with precipitation, temperature, flowering, and fruiting seasons of woody plants. These results may be subject to the influence of climatological factors and the availability of food resources, such as arthropods, that were not covered in this study. Furthermore, inference is limited due to the relatively short time frame of the study.</p

Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis rcd1 mutant

The Arabidopsis mutant rcd1 is tolerant to methyl viologen (MV). MV enhances the Mehler reaction, i.e. electron transfer from Photosystem I (PSI) to O-2, generating reactive oxygen species (ROS) in the chloroplast. To study the MV tolerance of rcd1, we first addressed chloroplast thiol redox enzymes potentially implicated in ROS scavenging. NADPH-thioredoxin oxidoreductase type C (NTRC) was more reduced in rcd1. NTRC contributed to the photosynthetic and metabolic phenotypes of rcd1, but did not determine its MV tolerance. We next tested rcd1 for alterations in the Mehler reaction. In rcd1, but not in the wild type, the PSI-to-MV electron transfer was abolished by hypoxic atmosphere. A characteristic feature of rcd1 is constitutive expression of mitochondrial dysfunction stimulon (MDS) genes that affect mitochondrial respiration. Similarly to rcd1, in other MDS-overexpressing plants hypoxia also inhibited the PSI-to-MV electron transfer. One possible explanation is that the MDS gene products may affect the Mehler reaction by altering the availability of O-2. In green tissues, this putative effect is masked by photosynthetic O-2 evolution. However, O-2 evolution was rapidly suppressed in MV-treated plants. Transcriptomic meta-analysis indicated that MDS gene expression is linked to hypoxic response not only under MV, but also in standard growth conditions. This article is part of the theme issue 'Retrograde signalling from endosymbiotic organelles'.Peer reviewe

The atmospheric role in the Arctic water cycle: A review on processes, past and future changes, and their impacts

This is the final version of the article. Available from the publisher via the DOI in this record.Atmospheric humidity, clouds, precipitation, and evapotranspiration are essential components of the Arctic climate system. During recent decades, specific humidity and precipitation have generally increased in the Arctic, but changes in evapotranspiration are poorly known. Trends in clouds vary depending on the region and season. Climate model experiments suggest that increases in precipitation are related to global warming. In turn, feedbacks associated with the increase in atmospheric moisture and decrease in sea ice and snow cover have contributed to the Arctic amplification of global warming. Climate models have captured the overall wetting trend but have limited success in reproducing regional details. For the rest of the 21st century, climate models project strong warming and increasing precipitation, but different models yield different results for changes in cloud cover. The model differences are largest in months of minimum sea ice cover. Evapotranspiration is projected to increase in winter but in summer to decrease over the oceans and increase over land. Increasing net precipitation increases river discharge to the Arctic Ocean. Over sea ice in summer, projected increase in rain and decrease in snowfall decrease the surface albedo and, hence, further amplify snow/ice surface melt. With reducing sea ice, wind forcing on the Arctic Ocean increases with impacts on ocean currents and freshwater transport out of the Arctic. Improvements in observations, process understanding, and modeling capabilities are needed to better quantify the atmospheric role in the Arctic water cycle and its changes.We thank all colleagues involved in the Arctic Freshwater Synthesis (AFS) for fruitful discussions. In particular, John Walsh is acknowledged for his constructive comments on the manuscript. AFS has been sponsored by the World Climate Research Programme’s Climate and the Cryosphere project (WCRP-CliC), the International Arctic Science Committee (IASC), and the Arctic Monitoring and Assessment Programme (AMAP). The work for this paper has been supported by the Academy of Finland (contracts 259537 and 283101), the UK Natural Environment Research Council (grant NE/J019585/1), the US National Science Foundation grant ARC-1023592 and the Program “Arctic” and the Basic Research Program of the Presidium Russian Academy of Sciences. NCAR is supported by the U.S. National Science Foundation. We gratefully acknowledge the project coordination and meeting support of Jenny Baeseman and Gwenaelle Hamon at the CliC International Project Office. No new data were applied in the manuscript. Data applied for Figures 2 and 3 are available from the JRA-55 archive at http://jra. kishou.go.jp/JRA-55/index_en. html#usage

Mikrobilääkeresistenssi ja -jäämät nautatilalla - vaikutukset ympäristöön ja terveyteen (NAMI)

Tässä Ruokaviraston (ennen Elintarviketurvallisuusvirasto Evira), Luken ja SYKEn yhteisprojektissa tutkittiin mikrobilääkejäämien ja resistenttien suolistobakteerien kulkeutumista lääkityistä lypsylehmistä navettaympäristön kautta lantavarastoihin. Lisäksi arvioitiin niiden leviämistä lannan peltolevitysten välityksellä luonnon eliöihin sekä elintarviketuotantoketjussa. Projektissa tutkittiin myös anaerobisen mesofiilisen mädätyksen vaikutuksia lannassa oleviin mikrobilääkejäämiin ja resistentteihin suolistobakteereihin sekä toisaalta lannan mikrobilääkejäämien vaikutusta mädädysprosessin toimintaan. Lisäksi arvioitiin erilaisten lannan prosessointitapojen elinkaarisia ympäristövaikutuksia sekä vaikutuksia mikrobilääkejäämiin ja -resistenssiin. Resistentit ja moniresistentit suolistobakteerit kulkeutuivat lypsykarjatilalla lantavarastoihin, mutta ne eivät rikastuneet lantaketjussa. Lypsykarjan lietelannasta mitattiin hyvin pieniä pitoisuuksia mikrobilääkkeitä. Lääkittyjen eläinten sonnasta ja virtsasta taas mitattiin hoidon aikana hyvin korkeita pitoisuuksia mikrobilääkejäämiä, jolloin niistä muodostuvissa (kuivissa) lannoissa voi olla korkeita paikallisia pitoisuuksia mikrobilääkkeitä. Suomessa myös mikrobilääkkeillä lääkittyjen eläinten lannat levitetään pääosin käsittelemättöminä kasvinravinteiksi pelloille, jolloin lannan mukana voi levitä mikrobilääkejäämiä ja resistenttejä suolistobakteereita. Luonnon eliöt voivat altistua lannassa oleville mikrobilääkkeille ja resistenteille suolistobakteereille myös Suomen olosuhteissa. Lääkittyjen eläinten lantojen lannoitekäyttöä käsittelemättömänä tulisi arvioida kriittisesti. Mesofiilinen anaerobinen mädätys voi vähentää mikrobilääkejäämiä lannasta, mutta ei välttämättä hajota niitä. Se vähentää elävien suolistobakteerien määrää lannassa, mutta merkittävää vaikutusta resistenttien E. coli -bakteerien osuuteen ei havaittu. Erilaiset lannankäsittelytavat voivat kuitenkin soveltua – ravinteiden kierrätyksen ja energiantuoton lisäksi – mikrobilääkejäämien ja resistenssin torjumiseen, ja niitä tulisikin tässä tarkoituksessa tutkia tarkemmin Suomessa.I detta samprojekt mellan Livsmedelsverket (före detta Livsmedelssäkerhetsverket Evira), Luke och SYKE undersöktes spridningen av resthalter av antimikrobiella läkemedel och resistenta tarmbakterier från behandlade mjölkkor till gödsellager via ladugårdsmiljön. Därtill uppskattades spridningen till organismer i naturen via gödselspridning på åkrar samt i livsmedelskedjan. I projektet undersöktes även effekten av anaerob mesofil rötning på resthalter av antimikrobiella medel i gödsel och resistenta tarmbakterier samt även effekten av resthalter av antimikrobiella medel på rötningsprocessen. Dessutom analyserades livscykeln för miljöpåverkan av de olika gödselbearbetningsmetoderna samt effekterna på resthalter av antimikrobiella medel och resistens. Resistenta och multiresistenta tarmbakterier spreds på mjölkgården till gödsellagren, men anrikades inte i gödselkedjan. Mycket små halter av antimikrobiella medel uppmättes i mjölkkornas flytgödsel. Men mycket höga resthalter av antimikrobiella medel uppmättes i gödsel och urin medan djuren behandlades, och då kan det finnas höga lokala halter av antimikrobiella medel i deras (torr)gödsel. I Finland sprids gödsel även av antibiotikabehandlade djur till största delen obehandlad som växtnäring på åkrar, och då kan resthalter av antimikrobiella medel och resistenta tarmbakterier spridas med gödseln. Organismer i naturen kan utsättas för antimikrobiella medel i gödsel och resistenta tarmbakterier även i finländska förhållanden. Användningen av obehandlad gödsel från medicinerade djur borde utvärderas kritiskt. Mesofil anaerob rötning kan minska på mängden resthalter av antimikrobiella medel i gödseln, men bryter inte nödvändigtvis ned dem. Den minskar på mängden levande tarmbakterier i gödseln, men ingen betydande effekt på andelen resistenta E.coli-bakterier påvisades. Olika sätt att behandla gödsel kan ändå, utöver återvinning av näringsämnen och energiproduktion, lämpa sig för bekämpning av antimikrobiella resthalter och resistens, och de borde undersökas mera detaljerat i Finland i det syftet.This study was conducted by Finnish Food Authority (formerly Finnish Food Safety Authority Evira), Natural Resources Institute Finland Luke and Finnish Environment Institute SYKE in 2015–2018. The aims of the study were to examine how antimicrobial residues and antimicrobial-resistant E. coli bacteria spread via the manure chain from the dairy cows treated with antimicrobials to the farm environment and manure storages. Furthermore, the dissemination routes to the surrounding environment, ecosystems and back to the food chain in Finnish conditions were profiled. The effect of mesophilic anaerobic digestion process on the level of antimicrobial residues and antimicrobial-resistant E. coli was examined and, conversely, the effect of antimicrobial residues on the process as well. Finally, the life-cycle of different manure handling and processing methods, and their potential effects on nutrient recycling, energy production, antimicrobial residues and resistant bacteria were evaluated. Resistant and multi-resistant E. coli spread to the manure storages, although enrichment in their proportion over the manure chain was not detected. Only minor concentrations of antimicrobial residues were measured from the liquid manure. Instead, very high concentrations of antimicrobial residues were measured from the faeces, urine and milk of dairy cows medicated with antimicrobials, which may lead to high local concentrations in (dry) manures composed of them. In Finland, there is no withdrawal period for manure of medicated animals to be used as a fertilizer. Therefore, manures may contain antimicrobial residues, as well as resistant bacteria, which disseminate to the environment when applied to the fields. Animals and plants may be exposed to antimicrobial residues and resistant bacteria in agricultural and natural ecosystems in Finnish conditions as well. Therefore, fertilizer usage of faeces, urine and milk excreted by animals treated with antimicrobials should be subjected to critical assessment. Treating the manure with mesophilic anaerobic digestion may reduce the concentration of antimicrobial residues but does not necessarily destroy them. Furthermore, the process reduced the number of total E. coli bacteria, although it did not have an effect on the proportion of resistant E. coli. Along with energy production and nutrient recycling, different manure handling and processing methods may, however, be suitable for destroying and reducing antimicrobial residues and resistant bacteria from manure, and substantially reduce the emission of antimicrobial residues and resistant bacteria to the environment, as well as to the food chain. The aspect of tackling the spread of antimicrobial resistance is to be considered when manure processing methods are developed in Finland

The first report of Gyrodactylus salaris Malmberg, 1957 (Platyhelminthes, Monogenea) on Italian cultured stocks of rainbow trout (Oncorhynchus mykiss Walbaum)

The monogenean Gyrodactylus salons Malmberg, 1957 is considered one of the most important parasites of wild salmonids in the European Community due to the heavy ecological and economical damage it has inflicted on Atlantic salmon (Salmo salar) part populations. Rainbow trout (Oncorhynchus mykiss) is susceptible to G. salaris and can act as a suitable carrier host and, consequently, its trade in EU territory is restricted in relation to the status of "recognized free" zones. Despite the economic importance of rainbow trout farming in Italy, information on the Italian gyrodactylid fauna is lacking and prior to this salons had not been officially reported. During a routine health examination of study farmed rainbow trout stock throughout Central and Northern Italy in 2004-2005, five fish farms were found to be infected with G. salons alongside three other gyrodactylids Morphological and molecular characterisation confirmed the presence of G. salons, Gyrodactylus teuchis Lautraite, Blanc, Thiery, Daniel et Vigneulle, 1999 and Gyrodactylus derjavinoides Malmberg, Collins, Cunningham et Jalah, 2007, while Gyrodactylus truttae Glaser, 1974 was identified by morphological analysis only. The findings from this study extend the distribution of G. salons within Europe and highlight the importance of the rainbow trout trade in its dissemination

Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus. ROS alter the abundance, thiol redox state and oligomerization of the RCD1 protein in vivo, providing feedback control on its function. RCD1-dependent regulation is linked to chloroplast signaling by 3'-phosphoadenosine 5'-phosphate (PAP). Thus, RCD1 integrates organellar signaling from chloroplasts and mitochondria to establish transcriptional control over the metabolic processes in both organelles.Peer reviewe

Role of Plastid Protein Phosphatase TAP38 in LHCII Dephosphorylation and Thylakoid Electron Flow

Regulation of photosynthesis efficiency involves reversible phosphorylation of the light-harvesting complex through the activity of the newly identified phosphatase TAP38

High Light Induced Disassembly of Photosystem II Supercomplexes in Arabidopsis Requires STN7-Dependent Phosphorylation of CP29

Photosynthetic oxidation of water and production of oxygen by photosystem II (PSII) in thylakoid membranes of plant chloroplasts is highly affected by changes in light intensities. To minimize damage imposed by excessive sunlight and sustain the photosynthetic activity PSII, organized in supercomplexes with its light harvesting antenna, undergoes conformational changes, disassembly and repair via not clearly understood mechanisms. We characterized the phosphoproteome of the thylakoid membranes from Arabidopsis thaliana wild type, stn7, stn8 and stn7stn8 mutant plants exposed to high light. The high light treatment of the wild type and stn8 caused specific increase in phosphorylation of Lhcb4.1 and Lhcb4.2 isoforms of the PSII linker protein CP29 at five different threonine residues. Phosphorylation of CP29 at four of these residues was not found in stn7 and stn7stn8 plants lacking the STN7 protein kinase. Blue native gel electrophoresis followed by immunological and mass spectrometric analyses of the membrane protein complexes revealed that the high light treatment of the wild type caused redistribution of CP29 from PSII supercomplexes to PSII dimers and monomers. A similar high-light-induced disassembly of the PSII supercomplexes occurred in stn8, but not in stn7 and stn7stn8. Transfer of the high-light-treated wild type plants to normal light relocated CP29 back to PSII supercomplexes. We postulate that disassembly of PSII supercomplexes in plants exposed to high light involves STN7-kinase-dependent phosphorylation of the linker protein CP29. Disruption of this adaptive mechanism can explain dramatically retarded growth of the stn7 and stn7stn8 mutants under fluctuating normal/high light conditions, as previously reported

No behavioural response to kin competition in a lekking species

The processes of kin selection and competition may occur simultaneously if limited individual dispersal i.e. population viscosity, is the only cause of the interactions between kin. Therefore, the net indirect benefits of a specific behaviour may largely depend on the existence of mechanisms dampening the fitness costs of competing with kin. In lekking species, males may increase the mating success of their close relatives (and hence gain indirect fitness benefits) because female prefer large leks. At the same time, kin selection may also lead to the evolution of mechanisms that dampen the costs of kin competition. As this mechanism has largely been ignored to date, we used detailed behavioural and genetic data collected in the black grouse Lyrurus tetrix to test whether males mitigate the costs of kin competition through the modulation of their fighting behaviours according to kinship and the avoidance of close relatives when establishing a lek territory. We found that neighbouring males’ fighting behaviour was unrelated to kinship and males did not avoid settling down with close relatives on leks. As males’ current and future mating success are strongly related to their behaviour on the lek (including fighting behaviour and territory position), the costs of kin competition may be negligible relative to the direct benefits of successful male-male contests. As we previously showed that the indirect fitness benefits of group membership were very limited in this black grouse population, these behavioural data support the idea that direct fitness benefits gained by successful male-male encounters likely outbalance any indirect fitness benefits