Steady inter and intra-annual decrease in the vocalization frequency of Antarctic blue whales

Time averaged narrow-band noise near 27 Hz produced by vocalizations of many distant Antarctic blue whales intensifies seasonally from early February to late October in the ocean off Australia’s South West. Spectral characteristics of long term patterns in this noise band were analyzed using ambient noise data collected at the Comprehensive Nuclear-Test-Ban Treaty hydroacoustic station off Cape Leeuwin, Western Australia over 2002–2010. Within 7 day averaged noise spectra derived from 4096-point FFT (~0.06 Hz frequency resolution), the −3-dB width of the spectral peak from the upper tone of Antarctic blue whale vocalization was about 0.5 Hz. The spectral frequency peak of this tonal call was regularly but not gradually decreasing over the 9 years of observation from ~27.7 Hz in 2002 to ~26.6 Hz in 2010. The average frequency peak steadily decreased at a greater rate within a season at 0.4–0.5 Hz/season but then in the next year recovered to approximately the mean value of the previous season. A regression analysis showed that the interannual decrease rate of the peak frequency of the upper tonal call was 0.135 ± 0.003 Hz/year over 2002–2010 (R 2 ≈ 0.99). Possible causes of such a decline in the whale vocalization frequency are considered

Characteristics of sound propagation in shallow water over an elastic seabed with a thin cap-rock layer

Measurements of low-frequency sound propagation over the areas of the Australian continental shelf, where the bottom sediments consist primarily of calcarenite, have revealed that acoustic transmission losses are generally much higher than those observed over other continental shelves and remain relatively low only in a few narrow frequency bands. This paper considers this phenomenon and provides a physical interpretation in terms of normal modes in shallow water over a layered elastic seabed with a shear wave speed comparable to but lower than the water-column sound speed. A theoretical analysis and numerical modeling show that, in such environments, low attenuation of underwater sound is expected only in narrow frequency bands just above the modal critical frequencies which in turn are governed primarily by the water depth and compressional wave speed in the seabed. In addition, the effect of a thin layer of harder cap-rock overlaying less consolidated sediments is considered. Low-frequency transmission loss data collected from an offshore seismic survey in Bass Strait on the southern Australian continental shelf are analyzed and shown to be in broad agreement with the numerical predictions based on the theoretical analysis and modeling using an elastic parabolic equation solution for range-dependent bathymetry

Structural basis for the homotypic fusion of chlamydial inclusions by the SNARE-like protein IncA.

Many intracellular bacteria, including Chlamydia, establish a parasitic membrane-bound organelle inside the host cell that is essential for the bacteria\u27s survival. Chlamydia trachomatis forms inclusions that are decorated with poorly characterized membrane proteins known as Incs. The prototypical Inc, called IncA, enhances Chlamydia pathogenicity by promoting the homotypic fusion of inclusions and shares structural and functional similarity to eukaryotic SNAREs. Here, we present the atomic structure of the cytoplasmic domain of IncA, which reveals a non-canonical four-helix bundle. Structure-based mutagenesis, molecular dynamics simulation, and functional cellular assays identify an intramolecular clamp that is essential for IncA-mediated homotypic membrane fusion during infection

Computation and visualization of photonic quasicrystal spectra via Blochs theorem

Previous methods for determining photonic quasicrystal (PQC) spectra have relied on the use of large supercells to compute the eigenfrequencies and/or local density of states (LDOS). In this manuscript, we present a method by which the energy spectrum and the eigenstates of a PQC can be obtained by solving Maxwells equations in higher dimensions for any PQC defined by the standard cut-and-project construction, to which a generalization of Blochs theorem applies. In addition, we demonstrate how one can compute band structures with defect states in the higher-dimensional superspace with no additional computational cost. As a proof of concept, these general ideas are demonstrated for the simple case of one-dimensional quasicrystals, which can also be solved by simple transfer-matrix techniques.Comment: Published in Physical Review B, 77 104201, 200

Casimir micro-sphere diclusters and three-body effects in fluids

Our previous article [Phys. Rev. Lett. 104, 060401 (2010)] predicted that Casimir forces induced by the material-dispersion properties of certain dielectrics can give rise to stable configurations of objects. This phenomenon was illustrated via a dicluster configuration of non-touching objects consisting of two spheres immersed in a fluid and suspended against gravity above a plate. Here, we examine these predictions from the perspective of a practical experiment and consider the influence of non-additive, three-body, and nonzero-temperature effects on the stability of the two spheres. We conclude that the presence of Brownian motion reduces the set of experimentally realizable silicon/teflon spherical diclusters to those consisting of layered micro-spheres, such as the hollow- core (spherical shells) considered here.Comment: 11 pages, 9 figure

HIV-1 R5 Macrophage-Tropic Envelope Glycoprotein Trimers Bind CD4 with High Affinity, while the CD4 Binding Site on Non-macrophage-tropic, T-Tropic R5 Envelopes Is Occluded

HIV-1 R5 variants exploit CCR5 as a coreceptor to infect both T cells and macrophages. R5 viruses that are transmitted or derived from immune tissue and peripheral blood are mainly inefficient at mediating infection of macrophages. In contrast, highly macrophage-tropic (mac-tropic) R5 viruses predominate in brain tissue and can be detected in cerebrospinal fluid but are infrequent in immune tissue or blood even in late disease. These mac-tropic R5 variants carry envelope glycoproteins (Envs) adapted to exploit low levels of CD4 on macrophages to induce infection. However, it is unclear whether this adaptation is conferred by an increased affinity of the Env trimer for CD4 or is mediated by postbinding structural rearrangements in the trimer that enhance the exposure of the coreceptor binding site and facilitate events leading to fusion and virus entry. In this study, we investigated CD4 binding to mac-tropic and non-mac-tropic Env trimers and showed that CD4-IgG binds efficiently to mac-tropic R5 Env trimers, while binding to non-mac-tropic trimers was undetectable. Our data indicated that the CD4 binding site (CD4bs) is highly occluded on Env trimers of non-mac-tropic R5 viruses. Such viruses may therefore infect T cells via viral synapses where Env and CD4 become highly concentrated. This environment will enable high-avidity interactions that overcome extremely low Env-CD4 affinities. IMPORTANCE HIV R5 variants bind to CD4 and CCR5 receptors on T cells and macrophages to initiate infection. Transmitted HIV variants infect T cells but not macrophages, and these viral strains persist in immune tissue even in late disease. Here we show that the binding site for CD4 present on HIV\u27s envelope protein is occluded on viruses replicating in immune tissue. This occlusion likely prevents antibody binding to this site and neutralization of the virus, but it makes it difficult for virus-CD4 interactions to occur. Such viruses probably pass from T cell to T cell via cell contacts where CD4 is highly concentrated and allows infection via inefficient envelope-CD4 binding. Our data are highly relevant for vaccines that aim to induce antibodies targeting the CD4 binding site on the envelope protein

Circadian Modulation of Neurons and Astrocytes Controls Synaptic Plasticity in Hippocampal Area CA1

Most animal species operate according to a 24-h period set by the suprachiasmatic nucleus (SCN) of the hypothalamus. The rhythmic activity of the SCN modulates hippocampal-dependent memory, but the molecular and cellular mechanisms that account for this effect remain largely unknown. Here, we identify cell-type-specific structural and functional changes that occur with circadian rhythmicity in neurons and astrocytes in hippocampal area CA1. Pyramidal neurons change the surface expression of NMDA receptors. Astrocytes change their proximity to synapses. Together, these phenomena alter glutamate clearance, receptor activation, and integration of temporally clustered excitatory synaptic inputs, ultimately shaping hippocampal-dependent learning in vivo. We identify corticosterone as a key contributor to changes in synaptic strength. These findings highlight important mechanisms through which neurons and astrocytes modify the molecular composition and structure of the synaptic environment, contribute to the local storage of information in the hippocampus, and alter the temporal dynamics of cognitive processing

Modern microwave methods in solid state inorganic materials chemistry: from fundamentals to manufacturing

No abstract available

Measurement of the Forward-Backward Asymmetry in the B -> K(*) mu+ mu- Decay and First Observation of the Bs -> phi mu+ mu- Decay

We reconstruct the rare decays $B^+ \to K^+\mu^+\mu^-$, $B^0 \to K^{*}(892)^0\mu^+\mu^-$, and $B^0_s \to \phi(1020)\mu^+\mu^-$ in a data sample corresponding to $4.4 {\rm fb^{-1}}$ collected in $p\bar{p}$ collisions at $\sqrt{s}=1.96 {\rm TeV}$ by the CDF II detector at the Fermilab Tevatron Collider. Using $121 \pm 16$ $B^+ \to K^+\mu^+\mu^-$ and $101 \pm 12$ $B^0 \to K^{*0}\mu^+\mu^-$ decays we report the branching ratios. In addition, we report the measurement of the differential branching ratio and the muon forward-backward asymmetry in the $B^+$ and $B^0$ decay modes, and the $K^{*0}$ longitudinal polarization in the $B^0$ decay mode with respect to the squared dimuon mass. These are consistent with the theoretical prediction from the standard model, and most recent determinations from other experiments and of comparable accuracy. We also report the first observation of the $B^0_s \to \phi\mu^+\mu^- decay and measure its branching ratio${\mathcal{B}}(B^0_s \to \phi\mu^+\mu^-) = [1.44 \pm 0.33 \pm 0.46] \times 10^{-6}$using$27 \pm 6$signal events. This is currently the most rare$B^0_s$ decay observed.Comment: 7 pages, 2 figures, 3 tables. Submitted to Phys. Rev. Let