3,417 research outputs found

    NFC Approach: Towards a Simple Interaction

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    Nowadays, there are devices with great computing capabilities and these in different places around us. This technology opens us new possibilities and allows us the simple and easy interaction between user and computer. We propose in this work an approach to make it easier to handle information in the ducational context; we have adapted Near Field Communication (NFC) technology which provides a simple input to the system to come from the own context like of the environment. For this, it is necessary only the user bring his/her mobile phone, equipped with a radiofrequency reader, and near it to tag obtaining services like localization, access, presence and, the most important for us, the visualization of information.Nowadays, there are devices with great computing capabilities and these in different places around us. This technology opens us new possibilities and allows us the simple and easy interaction between user and computer. We propose in this work an approach to make it easier to handle information in the ducational context; we have adapted Near Field Communication (NFC) technology which provides a simple input to the system to come from the own context like of the environment. For this, it is necessary only the user bring his/her mobile phone, equipped with a radiofrequency reader, and near it to tag obtaining services like localization, access, presence and, the most important for us, the visualization of information

    Temperature Dependence of the Electron-Drift Anisotropy and Implications for the Electron-Drift Model

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    The electron drift in germanium detectors is modeled making many assumptions. Confronted with data, these assumptions have to be revisited. The temperature dependence of the drift of electrons was studied in detail for an n-type segmented point-contact germanium detector. The detector was mounted in a temperature controlled, electrically cooled cryostat. Surface events were induced with collimated 81 keV photons from a 133^{133}Ba source. A detailed analysis of the rise time of pulses collected in surface scans, performed at different temperatures, is presented. The longitudinal anisotropy of the electron drift decreases with rising temperature. A new approach, making use of designated rise-time windows determined by simulations using SolidStateDetectors.jl, was used to isolate the longitudinal drift of electrons along different axes to quantify this observation. The measured temperature dependence of the longitudinal drift velocities combined with the standard electron drift model as widely used in relevant simulation packages results in unphysical predictions. A first suggestion to modify the electron-drift model is motivated and described. The results of a first implementation of the modified model in SolidStateDetectors.jl are shown. They describe the data reasonably well. A general review of the model and the standard input values for mobilities is suggested

    Optimizing single-mode collection from pointlike sources of single photons with adaptive optics

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    Army Research Office MURI on Hybrid Quantum Interactions Program W911NF09104.The collection efficiency of light from a point-like emitter may be extremely poor due to aberrations induced by collection optics and the emission distribution of the source. Analyzing the aberrant wavefront (e.g., with a Shack-Hartmann sensor) and correcting accordingly can be infeasible on the single-photon level. We present a technique that uses a genetic algorithm to control a deformable mirror for correcting wavefront aberrations in single-photon signals from point emitters. We apply our technique to both a simulated point source and a real InAs quantum dot, achieving coupling increases of up to 50x00025; and automatic reduction of system drift.PostprintPeer reviewe

    Machine learning combining multi-omics data and network algorithms identifies adrenocortical carcinoma prognostic biomarkers

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    Background: Rare endocrine cancers such as Adrenocortical Carcinoma (ACC) present a serious diagnostic and prognostication challenge. The knowledge about ACC pathogenesis is incomplete, and patients have limited therapeutic options. Identification of molecular drivers and effective biomarkers is required for timely diagnosis of the disease and stratify patients to offer the most beneficial treatments. In this study we demonstrate how machine learning methods integrating multi-omics data, in combination with system biology tools, can contribute to the identification of new prognostic biomarkers for ACC.Methods: ACC gene expression and DNA methylation datasets were downloaded from the Xena Browser (GDC TCGA Adrenocortical Carcinoma cohort). A highly correlated multi-omics signature discriminating groups of samples was identified with the data integration analysis for biomarker discovery using latent components (DIABLO) method. Additional regulators of the identified signature were discovered using Clarivate CBDD (Computational Biology for Drug Discovery) network propagation and hidden nodes algorithms on a curated network of molecular interactions (MetaBase™). The discriminative power of the multi-omics signature and their regulators was delineated by training a random forest classifier using 55 samples, by employing a 10-fold cross validation with five iterations. The prognostic value of the identified biomarkers was further assessed on an external ACC dataset obtained from GEO (GSE49280) using the Kaplan-Meier estimator method. An optimal prognostic signature was finally derived using the stepwise Akaike Information Criterion (AIC) that allowed categorization of samples into high and low-risk groups.Results: A multi-omics signature including genes, micro RNA's and methylation sites was generated. Systems biology tools identified additional genes regulating the features included in the multi-omics signature. RNA-seq, miRNA-seq and DNA methylation sets of features revealed a high power to classify patients from stages I-II and stages III-IV, outperforming previously identified prognostic biomarkers. Using an independent dataset, associations of the genes included in the signature with Overall Survival (OS) data demonstrated that patients with differential expression levels of 8 genes and 4 micro RNA's showed a statistically significant decrease in OS. We also found an independent prognostic signature for ACC with potential use in clinical practice, combining 9-gene/micro RNA features, that successfully predicted high-risk ACC cancer patients.Conclusion: Machine learning and integrative analysis of multi-omics data, in combination with Clarivate CBDD systems biology tools, identified a set of biomarkers with high prognostic value for ACC disease. Multi-omics data is a promising resource for the identification of drivers and new prognostic biomarkers in rare diseases that could be used in clinical practice

    Black-Hole-to-Halo Mass Relation From UNIONS Weak Lensing

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    This letter presents, for the first time, direct constraints on the black-hole-to-halo-mass relation using weak gravitational lensing measurements. We construct type I and type II Active Galactic Nuclei (AGNs) samples from the Sloan Digital Sky Survey (SDSS), with a mean redshift of 0.4 0.1 for type I (type II) AGNs. This sample is cross-correlated with weak lensing shear from the Ultraviolet Near Infrared Northern Survey (UNIONS). We compute the excess surface mass density of the halos associated with 36,18136,181 AGNs from 94,308,56194,308,561 lensed galaxies and fit the halo mass in bins of black-hole mass. We find that more massive AGNs reside in more massive halos. We see no evidence of dependence on AGN type or redshift in the black-hole-to-halo-mass relationship when systematic errors in the measured black-hole masses are included. Our results are consistent with previous measurements for non-AGN galaxies. At a fixed black-hole mass, our weak-lensing halo masses are consistent with galaxy rotation curves, but significantly lower than galaxy clustering measurements. Finally, our results are broadly consistent with state-of-the-art hydro-dynamical cosmological simulations, providing a new constraint for black-hole masses in simulations.Comment: 14 pages, 5 figures. Submitted to ApJ

    Molecular spectrum and differential diagnosis in patients referred with sporadic or autosomal recessive osteogenesis imperfecta

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    Background: Osteogenesis imperfecta (OI) is a heterogeneous bone disorder characterized by recurrent fractures. Although most cases of OI have heterozygous mutations in COL1A1 or COL1A2 and show autosomal dominant inheritance, during the last years there has been an explosion in the number of genes responsible for both recessive and dominant forms of this condition. Herein, we have analyzed a cohort of patients with OI, all offspring of unaffected parents, to determine the spectrum of variants accounting for these cases. Twenty patients had nonrelated parents and were sporadic, and 21 were born to consanguineous relationships. Methods: Mutation analysis was performed using a next-generation sequencing gene panel, homozygosity mapping, and whole exome sequencing (WES). Results: Patients offspring of nonconsanguineous parents were mostly identified with COL1A1 or COL1A2 heterozygous changes, although there were also a few cases with IFITM5 and WNT1 heterozygous mutations. Only one sporadic patient was a compound heterozygote for two recessive mutations. Patients offspring of consanguineous parents showed homozygous changes in a variety of genes including CRTAP, FKBP10, LEPRE1, PLOD2, PPIB, SERPINF1, TMEM38B, and WNT1. In addition, two patients born to consanguineous parents were found to have de novo COL1A1 heterozygous mutations demonstrating that causative variants in the collagen I structural genes cannot be overlooked in affected children from consanguineous couples. Further to this, WES analysis in probands lacking mutations in OI genes revealed deleterious variants in SCN9A, NTRK1, and SLC2A2, which are associated with congenital indifference to pain (CIP) and Fanconi–Bickel syndrome (FBS). Conclusion: This work provides useful information for clinical and genetic diagnosis of OI patients with no positive family history of this disease. Our data also indicate that CIP and FBS are conditions to be considered in the differential diagnosis of OI and suggest a positive role of SCN9A and NTRK1 in bone development

    Energy Linearity and Resolution of the ATLAS Electromagnetic Barrel Calorimeter in an Electron Test-Beam

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    A module of the ATLAS electromagnetic barrel liquid argon calorimeter was exposed to the CERN electron test-beam at the H8 beam line upgraded for precision momentum measurement. The available energies of the electron beam ranged from 10 to 245 GeV. The electron beam impinged at one point corresponding to a pseudo-rapidity of eta=0.687 and an azimuthal angle of phi=0.28 in the ATLAS coordinate system. A detailed study of several effects biasing the electron energy measurement allowed an energy reconstruction procedure to be developed that ensures a good linearity and a good resolution. Use is made of detailed Monte Carlo simulations based on Geant which describe the longitudinal and transverse shower profiles as well as the energy distributions. For electron energies between 15 GeV and 180 GeV the deviation of the measured incident electron energy over the beam energy is within 0.1%. The systematic uncertainty of the measurement is about 0.1% at low energies and negligible at high energies. The energy resolution is found to be about 10% sqrt(E) for the sampling term and about 0.2% for the local constant term

    Position resolution and particle identification with the ATLAS EM calorimeter

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    In the years between 2000 and 2002 several pre-series and series modules of the ATLAS EM barrel and end-cap calorimeter were exposed to electron, photon and pion beams. The performance of the calorimeter with respect to its finely segmented first sampling has been studied. The polar angle resolution has been found to be in the range 50-60 mrad/sqrt(E (GeV)). The neutral pion rejection has been measured to be about 3.5 for 90% photon selection efficiency at pT=50 GeV/c. Electron-pion separation studies have indicated that a pion fake rate of (0.07-0.5)% can be achieved while maintaining 90% electron identification efficiency for energies up to 40 GeV.Comment: 32 pages, 22 figures, to be published in NIM
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