Groundwater Responses to Earth Tides: Evaluation of Analytical Solutions Using Numerical Simulation

Harmonic Earth tide components in well water levels have been used to estimate hydraulic and geomechanical subsurface properties. However, the robustness of various methods based on analytical solutions has not been established. First, we review the theory and examine the latest analytical solution used to relate well water levels to Earth tides. Second, we develop and verify a novel numerical model coupling hydraulics and geomechanics to Earth tide strains. Third, we assess subsurface conditions over depth for a range of realistic properties. Fourth, we simulate the well water level response to Earth tide strains within a 2D poroelastic layered aquifer system confined by a 100 m thick aquitard. We find that the non-linear inversion of analytical solutions to match two observations (amplitudes and phases) to multiple unknown parameters is sensible to the initial guess. We reveal that undrained, confined conditions are necessary for the analytical solution to be valid. This occurs for the dominant M$_2$ frequency at depths >50 m and requires specific storage at constant strain of S$_ϵ$ ≥ 10$^{−6}$ m$^{−1}$, hydraulic conductivity of the aquitard of k$_l$ ≤ 5 ⋅ 10$^{−5}$ ms$^{−1}$ and aquifer of k$_a$ ≥ 10$^{−4}$ ms$^{−1}$. We further illustrate that the analytical solution is valid in unconsolidated systems, whereas consolidated systems require additional consideration of the Biot modulus. Overall, a priori knowledge of the subsurface system supports interpretation of the groundwater response. Our results improve understanding of the effect of Earth tides on groundwater systems and its interpretation for subsurface properties

Red and blue netting alters leaf morphological and physiological characteristics in apple trees

There is little information about the role of red and blue light on leaf morphology and physiology in fruit trees, and more studies have been developed in herbaceous plants grown under controlled light conditions. The objective of this research was to evaluate the effect of red and blue screens on morpho-anatomy and gas exchange in apple leaves grown under ambient sunlight conditions. Apple trees cv. Fuji were covered by 40% red and blue nets, leaving trees with 20% white net as control. Light relations (photosynthetic photon flux density, PPFD; red to far-red light ratio, R/FR and blue to red light ratio, B/R), morpho-anatomical features of the leaf (palisade to spongy mesophyll ratio, P/S, and stomata density, SD) and leaf gas exchange (net photosynthesis rate, An; stomatal conductance, gs; transpiration rate, E; and intrinsic water use efficiency, IWUE) were evaluated. Red and blue nets reduced 27% PPFD, reducing by 20% SD and 25% P/S compared to control, but without negative effects on An and gs . Blue net increased gs 21%, leading to the highest E and lowest IWUE by increment of B/R light proportion. These findings demonstrate the potential use of red and blue nets for differential modulation of apple leaf gas exchange through sunlight management under field conditions

Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis

Indexación: Scopus.Teleosts exhibit a broad divergence in their adaptive response to stress, depending on the magnitude, duration, and frequency of stressors and the species receiving the stimulus. We have previously reported that the red cusk-eel (Genypterus chilensis), an important marine farmed fish, shows a physiological response to stress that results in increased skeletal muscle atrophy mediated by over-expression of components of the ubiquitin proteasome and autophagy-lysosomal systems. To better understand the systemic effects of stress on the red cusk-eel metabolism, the present study assessed the transcriptomic hepatic response to repetitive handling-stress. Using high-Throughput RNA-seq, 259 up-regulated transcripts were found, mostly associated with angiogenesis, gluconeogenesis, and triacylglyceride catabolism. Conversely, 293 transcripts were down-regulated, associated to cholesterol biosynthesis, PPARα signaling, fatty acid biosynthesis, and glycolysis. This gene signature was concordant with hepatic metabolite levels and hepatic oxidative damage. Moreover, the increased plasmatic levels of AST (aspartate aminotransferase), ALT (alanine aminotransferase) and AP (alkaline phosphatase), as well as liver histology suggest stress-induced liver steatosis. This study offers an integrative molecular and biochemical analysis of the hepatic response to handling-stress, and reveals unknown aspects of lipid metabolism in a non-model teleost.http://journals.plos.org/plosone/article?id=10.1371/journal.pone.017644

Analysis of rolling contact spall life in 440 C steel bearing rims

The results of a two year study of the mechanisms of spall failure in the HPOTP bearings are described. The objective was to build a foundation for detailed analyses of the contact life in terms of: cyclic plasticity, contact mechanics, spall nucleation, and spall growth. Since the laboratory rolling contact testing is carried out in the 3 ball/rod contact fatigue testing machine, the analysis of the contacts and contact lives produced in this machine received attention. The results from the experimentally observed growth lives are compared with calculated predictions derived from the fracture mechanics calculations

Species richness influences the spatial distribution of trees in European forests

The functioning of plant communities is strongly influenced by the number of species in the community and their spatial arrangement. This is because plants interact with their nearest neighbors and this interaction is expected to be stronger when the interacting individuals are ecologically similar in terms of resource use. Recent evidence shows that species richness alters the balance of intra- versus interspecific competition, but the effect of species richness, and phylogenetic and functional diversity on the spatial pattern of the plant communities remain less studied. Even far, how forest stand structure derived from past management practices can influence the relationship between species richness and spatial pattern is still unknown. Here, we evaluate the spatial distribution of woody individuals (DBH >7.5 cm) in 209 forest stands (i.e. plots) with an increasing level of species richness (from 1 up to 10 species) in six forest types along a latitudinal gradient in Europe. We used completely mapped plots to investigate the spatial pattern in each forest stand with point pattern techniques. We fitted linear models to analyze the effect of species richness (positively correlated with phylogenetic diversity) and functional diversity on tree spatial arrangements. We also controled this relationship by forest type and stand structure as a proxy of the management legacy. Our results showed a generalized positive effect of species richness and functional diversity on the degree of spatial clustering of trees, and on the spatial independence of tree sizes regardless of the forest type. Moreover, current tree spatial arrangements were still conditioned by its history of management; however its effect was independent of the number of species in the community. Our study showed that species richness and functional diversity are relevant attributes of forests influencing the spatial pattern of plant communities, and consequently forest functioning. © 2019 Nordic Society Oikos. Published by John Wiley & Sons LtdThis research was supported by the FunDivEUROPE project, receiving funding from the European Union Seventh Framework Programme (FP7/2007–2013) under grant agreement no.265171, the Spanish‐funded project REMEDINAL TE‐CM S2018/EMT‐4338 and COMEDIAS FEDER/Ministerio de Ciencia, Innovación y Universidades – Agencia Estatal de Investigación/_Proyecto CGL2017‐83170‐R. RB was funded by a Marie Skłodowska‐Curie Intra‐European fellowship (grant agreement no. 302445)

ECOPHAGE: Combating Antimicrobial Resistance Using Bacteriophages for Eco-Sustainable Agriculture and Food Systems

The focus of this meeting was to discuss the suitability of using bacteriophages as alternative antimicrobials in the agrifood sector. Following a One Health approach, the workshop explored the possibilities of implementing phage application strategies in the agriculture, animal husbandry, aquaculture, and food production sectors. Therefore, the meeting had gathered phage researchers, representatives of the agrifood industry, and policymakers to debate the advantages and potential shortcomings of using bacteriophages as alternatives to traditional antimicrobials and chemical pesticides. Industry delegates showed the latest objectives and demands from consumers. Representatives of regulatory agencies (European Medicines Agency (EMA) and Spanish Agency of Medicines and Health Products (AEMPS)) presented an update of new regulatory aspects that will impact and support the approval and implementation of phage application strategies across the different sectors

Analysis of the Zonula occludens Toxin Found in the Genome of the Chilean Non-toxigenic Vibrio parahaemolyticus Strain PMC53.7

Indexación: Scopus.Vibrio parahaemolyticus non-toxigenic strains are responsible for about 10% of acute gastroenteritis associated with this species, suggesting they harbor unique virulence factors. Zonula occludens toxin (Zot), firstly described in Vibrio cholerae, is a secreted toxin that increases intestinal permeability. Recently, we identified Zot-encoding genes in the genomes of highly cytotoxic Chilean V. parahaemolyticus strains, including the non-toxigenic clinical strain PMC53.7. To gain insights into a possible role of Zot in V. parahaemolyticus, we analyzed whether it could be responsible for cytotoxicity. However, we observed a barely positive correlation between Caco-2 cell membrane damage and Zot mRNA expression during PMC53.7 infection and non-cytotoxicity induction in response to purified PMC53.7-Zot. Unusually, we observed a particular actin disturbance on cells infected with PMC53.7. Based on this observation, we decided to compare the sequence of PMC53.7-Zot with Zot of human pathogenic species such as V. cholerae, Campylobacter concisus, Neisseria meningitidis, and other V. parahaemolyticus strains, using computational tools. The PMC53.7-Zot was compared with other toxins and identified as an endotoxin with conserved motifs in the N-terminus and a variable C-terminal region and without FCIGRL peptide. Notably, the C-terminal diversity among Zots meant that not all of them could be identified as toxins. Structurally, PMC53.7-Zot was modeled as a transmembrane protein. Our results suggested that it has partial 3D structure similarity with V. cholerae-Zot. Probably, the PMC53.7-Zot would affect the actin cytoskeletal, but, in the absence of FCIGRL, the mechanisms of actions must be elucidated. © Copyright © 2020 Pérez-Reytor, Pavón, Lopez-Joven, Ramírez-Araya, Peña-Varas, Plaza, Alegría-Arcos, Corsini, Jaña, Pavez, del Pozo, Bastías, Blondel, Ramírez and García.https://www.frontiersin.org/articles/10.3389/fcimb.2020.00482/ful

Psychological well-being in Europe after the outbreak of war in Ukraine

The Russian invasion of Ukraine on February 24, 2022, has had devastating effects on the Ukrainian population and the global economy, environment, and political order. However, little is known about the psychological states surrounding the outbreak of war, particularly the mental well-being of individuals outside Ukraine. Here, we present a longitudinal experience-sampling study of a convenience sample from 17 European countries (total participants = 1,341, total assessments = 44,894, countries with >100 participants = 5) that allows us to track well-being levels across countries during the weeks surrounding the outbreak of war. Our data show a significant decline in well-being on the day of the Russian invasion. Recovery over the following weeks was associated with an individual’s personality but was not statistically significantly associated with their age, gender, subjective social status, and political orientation. In general, well-being was lower on days when the war was more salient on social media. Our results demonstrate the need to consider the psychological implications of the Russo-Ukrainian war next to its humanitarian, economic, and ecological consequences

The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

The dataset presented here was collected by the GenTree project (EU-Horizon 2020), which aims to improve the use of forest genetic resources across Europe by better understanding how trees adapt to their local environment. This dataset of individual tree-core characteristics including ring-width series and whole-core wood density was collected for seven ecologically and economically important European tree species: silver birch (Betula pendula), European beech (Fagus sylvatica), Norway spruce (Picea abies), European black poplar (Populus nigra), maritime pine (Pinus pinaster), Scots pine (Pinus sylvestris), and sessile oak (Quercus petraea). Tree-ring width measurements were obtained from 3600 trees in 142 populations and whole-core wood density was measured for 3098 trees in 125 populations. This dataset covers most of the geographical and climatic range occupied by the selected species. The potential use of it will be highly valuable for assessing ecological and evolutionary responses to environmental conditions as well as for model development and parameterization, to predict adaptability under climate change scenarios