DRAC:Dose Rate and Age Calculator for trapped charge dating

Accurate calculation of the environmental radiation dose rate (Ḋ) is an essential part of trapped charge dating methods, such as luminescence and electron spin resonance dating. Although the calculation of Ḋ is not mathematically complex, the incorporation of multiple variables and the propagation of uncertainties can be challenging. The Dose Rate and Age Calculator (DRAC) is an open access, web-based program which enables rapid Ḋ calculation for trapped charge dating applications. Users can select from recently published attenuation and conversion factors to make mathematically robust, reproducible Ḋ calculations. Comparison of DRAC calculated Ḋ values against the published Ḋ determinations of 422 samples from 32 studies results in a reproducibility ratio of 1.01 ± 0.05. It is anticipated that DRAC will facilitate easier inter-laboratory comparisons and will provide greater transparency for Ḋ calculations. DRAC will be updated to reflect the latest advances in Ḋ calculation and is freely accessible at www.aber.ac.uk/alrl/drac. The code for DRAC is available from github at https://github.com/DRAC-calculator/DRAC-calculator

Re‐analysis of late Quaternary dust mass accumulation rates in Serbia using new luminescence chronology for loess–palaeosol sequence at Surduk

Despite numerous palaeoenvironmental investigations of loess–palaeosol sequences across the Carpathian Basin, well‐dated high‐resolution records are scarce. This paper presents a new high‐resolution chronology for the loess‐palaeosol sequence at Surduk (Serbia), based on optically stimulated luminescence (quartz) and post‐infrared infrared stimulated luminescence (polymineral) dating. The presented record spans 53–19 ka, with primary loess deposition occurring after 52±2 ka, and differs from previously published chronologies that relied on less precise and now superseded dating protocols. Based on the new chronology, mass accumulation rates (MAR s) for Surduk were constructed and compared with sites in the Carpathian Basin. The results demonstrate that accumulation periods across this area are not consistent in timing or rates. The high‐resolution dating strategy identifies a disturbance in sediment deposition that occurred after 45±2 ka and implies that site contains a hiatus. Finally, we show samples that failed routine dose recovery and preheat plateau tests, and had low fast ratios. Supported by bulk sample geochemical analysis it is proposed that a potential abrupt source shift, during the Last Glacial Maximum, may be the cause of the anomalous luminescence behaviour

Luminescence Dating in Fluvial Settings: Overcoming the Challenge of Partial Bleaching

Optically stimulated luminescence (OSL) dating is a versatile technique that utilises the two most ubiquitous minerals on Earth (quartz or K-feldspar) for constraining the timing of sediment deposition. It has provided accurate ages in agreement with independent age control in many fluvial settings, but is often characterised by partial bleaching of individual grains. Partial bleaching can occur where sunlight exposure is limited and so only a portion of the grains in the sample was exposed to sunlight prior to burial, especially in sediment-laden, turbulent or deep water columns. OSL analysis on multiple grains can provide accurate ages for partially bleached sediments where the OSL signal intensity is dominated by a single brighter grain, but will overestimate the age where the OSL signal intensity is equally as bright (often typical of K-feldspar) or as dim (sometimes typical of quartz). In such settings, it is important to identify partial bleaching and the minimum dose population, preferably by analysing single grains, and applying the appropriate statistical age model to the dose population obtained for each sample. To determine accurate OSL ages using these age models, it is important to quantify the amount of scatter (or overdispersion) in the well-bleached part of the partially bleached dose distribution, which can vary between sediment samples depending upon the bedrock sources and transport histories of grains. Here, we discuss how the effects of partial bleaching can be easily identified and overcome to determine accurate ages. This discussion will therefore focus entirely on the burial dose determination for OSL dating, rather than the dose-rate, as only the burial doses are impacted by the effects of partial bleaching

Genome-wide association study of germline variants and breast cancer-specific mortality.

BackgroundWe examined the associations between germline variants and breast cancer mortality using a large meta-analysis of women of European ancestry.MethodsMeta-analyses included summary estimates based on Cox models of twelve datasets using ~10.4 million variants for 96,661 women with breast cancer and 7697 events (breast cancer-specific deaths). Oestrogen receptor (ER)-specific analyses were based on 64,171 ER-positive (4116) and 16,172 ER-negative (2125) patients. We evaluated the probability of a signal to be a true positive using the Bayesian false discovery probability (BFDP).ResultsWe did not find any variant associated with breast cancer-specific mortality at P < 5 × 10-8. For ER-positive disease, the most significantly associated variant was chr7:rs4717568 (BFDP = 7%, P = 1.28 × 10-7, hazard ratio [HR] = 0.88, 95% confidence interval [CI] = 0.84-0.92); the closest gene is AUTS2. For ER-negative disease, the most significant variant was chr7:rs67918676 (BFDP = 11%, P = 1.38 × 10-7, HR = 1.27, 95% CI = 1.16-1.39); located within a long intergenic non-coding RNA gene (AC004009.3), close to the HOXA gene cluster.ConclusionsWe uncovered germline variants on chromosome 7 at BFDP < 15% close to genes for which there is biological evidence related to breast cancer outcome. However, the paucity of variants associated with mortality at genome-wide significance underpins the challenge in providing genetic-based individualised prognostic information for breast cancer patients

Genome-wide association study of germline variants and breast cancer-specific mortality

BACKGROUND: We examined the associations between germline variants and breast cancer mortality using a large meta-analysis of women of European ancestry. METHODS: Meta-analyses included summary estimates based on Cox models of twelve datasets using ~10

Increasing frailty is associated with higher prevalence and reduced recognition of delirium in older hospitalised inpatients: results of a multi-centre study

Purpose: Delirium is a neuropsychiatric disorder delineated by an acute change in cognition, attention, and consciousness. It is common, particularly in older adults, but poorly recognised. Frailty is the accumulation of deficits conferring an increased risk of adverse outcomes. We set out to determine how severity of frailty, as measured using the CFS, affected delirium rates, and recognition in hospitalised older people in the United Kingdom. Methods: Adults over 65 years were included in an observational multi-centre audit across UK hospitals, two prospective rounds, and one retrospective note review. Clinical Frailty Scale (CFS), delirium status, and 30-day outcomes were recorded. Results: The overall prevalence of delirium was 16.3% (483). Patients with delirium were more frail than patients without delirium (median CFS 6 vs 4). The risk of delirium was greater with increasing frailty [OR 2.9 (1.8–4.6) in CFS 4 vs 1–3; OR 12.4 (6.2–24.5) in CFS 8 vs 1–3]. Higher CFS was associated with reduced recognition of delirium (OR of 0.7 (0.3–1.9) in CFS 4 compared to 0.2 (0.1–0.7) in CFS 8). These risks were both independent of age and dementia. Conclusion: We have demonstrated an incremental increase in risk of delirium with increasing frailty. This has important clinical implications, suggesting that frailty may provide a more nuanced measure of vulnerability to delirium and poor outcomes. However, the most frail patients are least likely to have their delirium diagnosed and there is a significant lack of research into the underlying pathophysiology of both of these common geriatric syndromes

Holocene palaeoenvironmental changes in the Thar Desert:an integrated assessment incorporating new insights from aeolian systems

Due to the scarcity of geochemical and palaeoecological proxies in drylands, dunes have often been used as geoproxies for late Quaternary palaeoenvironmental reconstruction, with chronologies commonly provided by luminescence dating. Owing to their widespread occurrence and location in a monsoonal regime, dunes in the Thar Desert in South Asia act as important archives of past landscape change. Previous reviews have assimilated dune age data from the Thar and suggested a temporally and spatially complex record of sediment accumulation over the last ∼70 ka. New luminescence age data presented in this study and from recent dunefield based investigations demonstrate a stronger Holocene record of dune building in parts of the Thar than previously suggested. In this study, the Accumulation Intensity (AI) methodology is applied to new and old data sets, providing records of dune accumulation that can be analysed alongside other palaeoenvironmental records. AI analysis demonstrates the significance of Holocene dune accumulation in the Thar landscape, with accumulation peaks observed between ∼12 and ∼8 ka, centred around ∼7, ∼5 and ∼3.5 ka, and in last two millennia. The strengthening of the Indian Summer Monsoon remains a significant influence on widespread dune accumulation in the early Holocene, but dunefields have also shown diverse and spatially intensive responses to sediment supply and anthropogenic disturbances during the late Holocene. Additionally, aeolian-fluvial sequences associated with the Ghaggar-Hakra palaeochannel along the northern margin of the Thar also display dynamic geomorphic behaviour during the Holocene. The integration and interpretation of the AI data with published, highly resolved geochemical proxies of palaeoclimate, shows a complex relationship between geoproxy and geochemical records. We suggest that process studies of geomorphologic systems and their diverse responses to the same environmental stimuli must be given due consideration before deriving palaeoenvironmental interpretations. Despite the presence of over a hundred Holocene dune records from the Thar, there still remains marked spatial and temporal gaps. Further intensive investigations of distinct dunefields with a strong chronometric framework and geomorphological grasp are required to gain significant insights into wider Thar landscape and palaeoenvironmental dynamics.</p