3,096 research outputs found
Strain-induced magma degassing: insights from simple-shear experiments on bubble bearing melts
International audienceExperiments have been performed to determine the effect of deformation on degassing of bubble-bearing melts. Cylindrical specimens of phonolitic composition, initial water content of 1.5 wt.% and 2 vol.% bubbles, have been deformed in simple-shear (torsional configuration) in an internally heated Paterson-type pressure vessel at temperatures of 798-848 K, 100-180 MPa confining pressure and different final strains. Micro-structural analyses of the samples before and after deformation have been performed in two and three dimensions using optical microscopy, a nanotomography machine and synchrotron tomography. The water content of the glasses before and after deformation has been measured using Fourier Transform Infrared Spectroscopy (FTIR). In samples strained up to a total of γ ∼ 2 the bubbles record accurately the total strain, whereas at higher strains (γ ∼ 10) the bubbles become very flattened and elongate in the direction of shear. The residual water content of the glasses remains constant up to a strain of γ ∼ 2 and then decreases to about 0.2 wt.% at γ ∼ 10. Results show that strain enhances bubble coalescence and degassing even at low bubble volume-fractions. Noticeably, deformation produced a strongly water under-saturated melt. This suggests that degassing may occur at great depths in the volcanic conduit and may force the magma to become super-cooled early during ascent to the Earth's surface potentially contributing to the genesis of obsidian
The effect of BPIFA1/SPLUNC1 genetic variation on its expression and function in asthmatic airway epithelium
Bacterial permeability family member A1 (BPIFA1), also known as short palate, lung, and nasal epithelium clone 1 (SPLUNC1), is a protein involved in the antiinflammatory response. The goal of this study was to determine whether BPIFA1 expression in asthmatic airways is regulated by genetic variations, altering epithelial responses to type 2 cytokines (e.g., IL-13). Nasal epithelial cells from patients with mild to severe asthma were collected from the National Heart, Lung, and Blood Institute Severe Asthma Research Program centers, genotyped for rs750064, and measured for BPIFA1. To determine the function of rs750064, cells were cultured at air-liquid interface and treated with IL-13 with or without recombinant human BPIFA1 (rhBPIFA1). Noncultured nasal cells with the rs750064 CC genotype had significantly less BPIFA1 mRNA expression than the CT and TT genotypes. Cultured CC versus CT and TT cells without stimulation maintained less BPIFA1 expression. With IL-13 treatment, CC genotype cells secreted more eotaxin-3 than CT and TT genotype cells. Also, rhBPIFA1 reduced IL-13-mediated eotaxin-3. BPIFA1 mRNA levels negatively correlated with serum IgE and fractional exhaled nitric oxide. Baseline FEV1% levels were lower in the asthma patients with the CC genotype (n = 1,016). Our data suggest that less BPIFA1 in asthma patients with the CC allele may predispose them to greater eosinophilic inflammation, which could be attenuated by rhBPIFA1 protein therapy
The First Brown Dwarf Discovered by the Backyard Worlds: Planet 9 Citizen Science Project
The Wide-field Infrared Survey Explorer (WISE) is a powerful tool for finding
nearby brown dwarfs and searching for new planets in the outer solar system,
especially with the incorporation of NEOWISE and NEOWISE-Reactivation data. So
far, searches for brown dwarfs in WISE data have yet to take advantage of the
full depth of the WISE images. To efficiently search this unexplored space via
visual inspection, we have launched a new citizen science project, called
"Backyard Worlds: Planet 9," which asks volunteers to examine short animations
composed of difference images constructed from time-resolved WISE coadds. We
report the discovery of the first new substellar object found by this project,
WISEA J110125.95+540052.8, a T5.5 brown dwarf located approximately 34 pc from
the Sun with a total proper motion of 0.7 as yr. WISEA
J110125.95+540052.8 has a WISE magnitude of , this
discovery demonstrates the ability of citizen scientists to identify moving
objects via visual inspection that are 0.9 magnitudes fainter than the
single-exposure sensitivity, a threshold that has limited prior motion-based
brown dwarf searches with WISE.Comment: 9 pages, 4 figures, 1 table. Accepted for publication in the
Astrophysical Journal Letter
A detailed phenotypic analysis of immune cell populations in the bronchoalveolar lavage fluid of atopic asthmatics after segmental allergen challenge
BACKGROUND: Atopic asthma is characterized by intermittent exacerbations triggered by exposure to allergen. Exacerbations are characterized by an acute inflammatory reaction in the airways, with recruitment of both innate and adaptive immune cells. These cell populations as well as soluble factors are critical for initiating and controlling the inflammatory processes in allergic asthma. Detailed data on the numbers and types of cells recruited following allergen challenge is lacking. In this paper we present an extensive phenotypic analysis of the inflammatory cell infiltrate present in the bronchoalveolar lavage (BAL) fluid following bronchoscopically directed allergen challenge in mild atopic asthmatics. METHODS: A re-analysis of pooled data obtained prior to intervention in our randomized, placebo controlled, double blinded study (costimulation inhibition in asthma trial [CIA]) was performed. Twenty-four subjects underwent bronchoscopically directed segmental allergen challenge followed by BAL collection 48 hours later. The BAL fluid was analyzed by multi-color flow cytometry for immune cell populations and multi-plex ELISA for cytokine detection. RESULTS: Allergen instillation induced pro-inflammatory cytokines (IL-6) and immune modulating cytokines (IL-2, IFN-γ, and IL-10) along with an increase in lymphocytes and suppressor cells (Tregs and MDSC). Interestingly, membrane expression of CD30 was identified on lymphocytes, especially Tregs, but not eosinophils. Soluble CD30 was also detected in the BAL fluid after allergen challenge in adult atopic asthmatics. CONCLUSIONS: After segmental allergen challenge of adult atopic asthmatics, cell types associated with a pro-inflammatory as well as an anti-inflammatory response are detected within the BAL fluid of the lung
Batrachochytrium salamandrivorans’ Amphibian Host Species and Invasion Range
Batrachochytrium salamandrivorans (Bsal), a species related to the destructive pathogen Batrachochytrium dendrobatidis (Bd), was found and identified in Europe in 2013. Now, a decade later, a large amount of information is available. This includes data from studies in the field, reports of infection in captive amphibians, laboratory studies testing host susceptibility, and data from prospective studies that test for Bsal’s presence in a location. We conducted a systematic review of the published literature and compiled a dataset of Bsal tests. We identified 67 species that have been reported positive for Bsal, 20 of which have a threatened conservation status. The distribution of species that have been found with infection encompasses 69 countries, highlighting the potential threat that Bsal poses. We point out where surveillance to detect Bsal have taken place and highlight areas that have not been well monitored. The large number of host species belonging to the families Plethodontidae and Salamandridae suggests a taxonomic pattern of susceptibility. Our results provide insight into the risk posed by Bsal and identifies vulnerable species and areas where surveillance is needed to fill existing knowledge gaps
Two-Timescale Learning Using Idiotypic Behaviour Mediation For A Navigating Mobile Robot
A combined Short-Term Learning (STL) and Long-Term Learning (LTL) approach to
solving mobile-robot navigation problems is presented and tested in both the
real and virtual domains. The LTL phase consists of rapid simulations that use
a Genetic Algorithm to derive diverse sets of behaviours, encoded as variable
sets of attributes, and the STL phase is an idiotypic Artificial Immune System.
Results from the LTL phase show that sets of behaviours develop very rapidly,
and significantly greater diversity is obtained when multiple autonomous
populations are used, rather than a single one. The architecture is assessed
under various scenarios, including removal of the LTL phase and switching off
the idiotypic mechanism in the STL phase. The comparisons provide substantial
evidence that the best option is the inclusion of both the LTL phase and the
idiotypic system. In addition, this paper shows that structurally different
environments can be used for the two phases without compromising
transferability.Comment: 40 pages, 12 tables, Journal of Applied Soft Computin
Cope’s Parrot Snake, Leptophis depressirostris (Cope 1861), predation on the frog, Craugastor mimus, in Costa Rica
Basal gnathostomes provide unique insights into the evolution of vitamin B12 binders
© The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Genome Biology and Evolution 7 (2015): 457-464, doi:10.1093/gbe/evu289.The uptake and transport of vitamin B12 (cobalamin; Cbl) in mammals involves a refined system with three evolutionarily related transporters: transcobalamin 1 (Tcn1), transcobalamin 2 (Tcn2), and the gastric intrinsic factor (Gif). Teleosts have a single documented binder with intermediate features to the human counterparts. Consequently, it has been proposed that the expansion of Cbl binders occurred after the separation of Actinopterygians. Here, we demonstrate that the diversification of this gene family took place earlier in gnathostome ancestry. Our data indicates the presence of single copy orthologs of the Sarcopterygii/Tetrapoda duplicates Tcn1 and Gif, and Tcn2, in Chondrichthyes. In addition, a highly divergent Cbl binder was found in the Elasmobranchii. We unveil a complex scenario forged by genome, tandem duplications and lineage-specific gene loss. Our findings suggest that from an ancestral transporter, exhibiting large spectrum and high affinity binding, highly specific Cbl transporters emerged through gene duplication and mutations at the binding pocket.This work was funded by the Fundação para a Ciência e a Tecnologia (FCT) project PEst-C/MAR/LA0015/2013. PhD grant SFRH/BD/84238/2012 awarded to M.L-.M. Postdoctoral grant SFRH/BPD/72519/2010 awarded to R.R
Conduit Dynamics in Transitional Rhyolitic Activity Recorded by Tuffisite Vein Textures from the 2008–2009 Chaitén Eruption
The mechanisms of hazardous silicic eruptions are controlled by complex, poorly-understood conduit processes. Observations of recent Chilean rhyolite eruptions have revealed the importance of hybrid activity, involving simultaneous explosive and effusive emissions from a common vent. Such behavior hinges upon the ability of gas to decouple from magma in the shallow conduit. Tuffisite veins are increasingly suspected to be a key facilitator of outgassing, as they repeatedly provide a transient permeable escape route for volcanic gases. Intersection of foam domains by tuffisite veins appears critical to efficient outgassing. However, knowledge is currently lacking into textural heterogeneities within shallow conduits, their relationship with tuffisite vein propagation, and the implications for fragmentation and degassing processes. Similarly, the magmatic vesiculation response to upper conduit pressure perturbations, such as those related to the slip of dense magma plugs, remains largely undefined. Here we provide a detailed characterization of an exceptionally large tuffisite vein within a rhyolitic obsidian bomb ejected during transitional explosive-effusive activity at Chaitén, Chile in May 2008. Vein textures and chemistry provide a time-integrated record of the invasion of a dense upper conduit plug by deeper fragmented magma. Quantitative textural analysis reveals diverse vesiculation histories of various juvenile clast types. Using vesicle size distributions, bubble number densities, zones of diffusive water depletion, and glass H2O concentrations, we propose a multi-step degassing/fragmentation history, spanning deep degassing to explosive bomb ejection. Rapid decompression events of ~3–4 MPa are associated with fragmentation of foam and dense magma at ~200–360 m depth in the conduit, permitting vertical gas and pyroclast mobility over hundreds of meters. Permeable pathway occlusion in the dense conduit plug by pyroclast accumulation and sintering preceded ultimate bomb ejection, which then triggered a final bubble nucleation event. Our results highlight how the vesiculation response of magma to decompression events is highly sensitive to the local melt volatile concentration, which is strongly spatially heterogeneous. Repeated opening of pervasive tuffisite vein networks promotes this heterogeneity, allowing juxtaposition of variably volatile-rich magma fragments that are derived from a wide range of depths in the conduit. This process enables efficient but explosive removal of gas from rhyolitic magma and creates a complex textural collage within dense rhyolitic lava, in which neighboring fused clasts may have experienced vastly different degassing histories
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