Developing Genetic Algorithms and Mixed Integer Linear Programs for Finding Optimal Strategies for a Student’s “Sports” Activity

An important advantage of genetic algorithms (GAs) are their ease of use, their wide applicability, and their good performance for a wide range of different problems. GAs are able to find good solutions for many problems even if the problem is complicated and its properties are not well known. In contrast, classical optimization approaches like linear programming or mixed integer linear programs (MILP) can only be applied to restricted types of problems as non-linearities of a problem that occur in many real-world applications can not appropriately modeled. This paper illustrates for an entertaining student “sports” game that GAs can easily be adapted to a problem where only limited knowledge about its properties and complexity are available and are able to solve the problem easily. Modeling the problem as a MILP and trying to solve it by using a standard MILP solver reveals that it is not solvable within reasonable time whereas GAs can solve it in a few seconds. The game studied is known to students as the so-called “beer-run”. There are different teams that have to walk a certain distance and to carry a case of beer. When reaching the goal all beer must have been consumed by the group and the winner of the game is the fastest team. The goal of optimization algorithms is to determine a strategy that minimizes the time necessary to reach the goal. This problem was chosen as it is not well studied and allows to demonstrate the advantages of using metaheuristics like GAs in comparison to standard optimization methods like MILP solvers for problems of unknown structure and complexity

Inversion of Gravity Data to Define the Pre-Cenozoic Surface and Regional Structures Possibly Influencing Groundwater Flow in the Rainier Mesa Region, Nye County, Nevada.

A three-dimensional inversion of gravity data from the Rainier Mesa area and surrounding regions reveals a topographically complex pre-Cenozoic basement surface. This model of the depth to pre-Cenozoic basement rocks is intended for use in a 3D hydrogeologic model being constructed for the Rainier Mesa area. Prior to this study, our knowledge of the depth to pre-Cenozoic basement rocks was based on a regional model, applicable to general studies of the greater Nevada Test Site area but inappropriate for higher resolution modeling of ground-water flow across the Rainier Mesa area. The new model incorporates several changes that lead to significant improvements over the previous regional view. First, the addition of constraining wells, encountering old volcanic rocks lying above but near pre-Cenozoic basement, prevents modeled basement from being too shallow. Second, an extensive literature and well data search has led to an increased understanding of the change of rock density with depth in the vicinity of Rainier Mesa. The third, and most important change, relates to the application of several depth-density relationships in the study area instead of a single generalized relationship, thereby improving the overall model fit. In general, the pre-Cenozoic basement surface deepens in the western part of the study area, delineating collapses within the Silent Canyon and Timber Mountain caldera complexes, and shallows in the east in the Eleana Range and Yucca Flat regions, where basement crops out. In the Rainier Mesa study area, basement is generally shallow (< 1 km). The new model identifies previously unrecognized structures within the pre-Cenozoic basement that may influence ground-water flow, such as a shallow basement ridge related to an inferred fault extending northward from Rainier Mesa into Kawich Valley

Bis[bis(trimethylsilyl)methyl]gallium bromide and monomeric {bis[bis(trimethylsilyl]methyl]gallium} [tris(trimethylsilyl)silyl]telluride [(Me3Si)2CH]2Ga–TeSi(SiMe3)3

Bis[bis(trimethylsilyl)methyl]gallium bromide GaBr[CH(SiMe3)2]2 (4), prepared from Ga2Br4 · 2 dioxane and bis(trimethylsilyl)-methyllithium in the molar ratio of 1:3, reacts with the sterically high-shielded lithium tris(trimethylsilyl)silyltelluride · DME to yield [(Me3Si)2CH]2Ga–TeSi(SiMe3)3 (5). 5 can also be synthesized by a metathetic reaction between tetrakis-[bis(trimethylsilyl)methyl]digallium(4) and bis[tris(trimethylsilyl)silyl]ditellane in toluene at 100°C. A crystal structure determination shows the compound to be monomeric in the solid state and the atoms of the central C2Ga–TeSi moiety to lie in the mirror plane of the molecule. The short Ga–Te distance of 253.5(1) pm as well as a hindered rotation (&#916;Erot &#8776; 50 kJ · mol-1) as detected by NMR measurements might be interpreted in terms of a &#960; interaction between gallium and tellurium

Gas transfer through clay barriers

Gas transport through clay-rocks can occur by different processes that can be basically subdivided into pressure-driven flow of a bulk gas phase and transport of dissolved gas either by molecular diffusion or advective water flow (Figure 1, Marschall et al., 2005). The relative importance of these transport mechanisms depends on the boundary conditions and the scale of the system. Pressure-driven volume flow (“Darcy flow”) of gas is the most efficient transport mechanism. It requires, however, pressure gradients that are sufficiently large to overcome capillary forces in the typically water-saturated rocks (purely gas-saturated argillaceous rocks are not considered in the present context). These pressure gradients may form as a consequence of the gravity field (buoyancy, compaction) or by gas generation processes (thermogenic, microbial, radiolytic). Dissolved gas may be transported by water flow along a hydraulic gradient. This process is not affected by capillary forces but constrained by the solubility of the gas. It has much lower transport efficiency than bulk gas phase flow. Molecular diffusion of dissolved gas, finally, is occurring essentially without constraints, ubiquitously and perpetually. Effective diffusion distances are, however, proportional to the square root of time, which limits the relevance of this transport process to the range of tens to hundreds of metres on a geological time scale (millions of years). 2 Process understanding and the quantification of the controlling parameters, like diffusion coefficients, capillary gas breakthrough pressures and effective gas permeability coefficients, is of great importance for up-scaling purposes in different research disciplines and applications. During the past decades, gas migration through fully water-saturated geological clay-rich barriers has been investigated extensively (Thomas et al., 1968, Pusch and Forsberg, 1983; Horseman et al., 1999; Galle, 2000; Hildenbrand et al., 2002; Marschall et al., 2005; Davy et al., 2009; Harrington et al., 2009, 2012a, 2014). All of these studies aimed at the analysis of experimental data determined for different materials (rocks of different lithotype, composition, compaction state) and pressure/temperature conditions. The clay-rocks investigated in these studies, ranged from unconsolidated to indurated clays and shales, all characterised by small pores (2-100 nm) and very low hydraulic conductivity (K < 10-12 m·s-1) or permeability coefficients (k < 10-19 m²). Studies concerning radioactive waste disposal include investigations of both the natural host rock formation and synthetic/engineered backfill material at a depth of a few hundred meters (IAEA, 2003, 2009). Within a geological disposal facility, hydrogen is generated by anaerobic corrosion of metals and through radiolysis of water (Rodwell et al., 1999; Yu and Weetjens, 2009). Additionally, methane and carbon dioxide are generated by microbial degradation of organic wastes (Rodwell et al., 1999; Ortiz et al., 2002; Johnson, 2006; Yu and Weetjens, 2009). The focus of carbon capture and storage (CCS) studies is on the analysis of the long-term sealing efficiency of lithologies above depleted reservoirs or saline aquifers, typically at larger depths (hundreds to thousands of meters). During the last decade, several studies were published on the sealing integrity of clay-rocks to carbon dioxide (Hildenbrand et al., 2004; Li et al., 2005; Hangx et al., 2009; Harrington et al., 2009; Skurtveit et al., 2012; Amann-Hildenbrand et al., 2013). In the context of petroleum system analysis, a significant volume of research has been undertaken regarding gas/oil expulsion mechanisms from sources rocks during burial history (Tissot & Pellet, 1971; Appold & Nunn, 2002), secondary migration (Luo et al., 2008) and the capillary sealing capacity of caprocks overlying natural gas accumulations (Berg, 1975; Schowalter, 1979; Krooss, 1992; Schlömer and Kross, 2004; Li et al., 2005; Berne et al., 2010). Recently, more attention has been paid to investigations of the transport efficiency of shales in the context of oil/gas shale production (Bustin et al., 2008; Eseme et al., 2012; Amann-Hildenbrand et al., 2012; Ghanizadeh et al., 2013, 2014). Analysis of the migration mechanisms within partly unlithified strata becomes important when explaining the 3 origin of overpressure zones, sub-seafloor gas domes and gas seepages (Hovland & Judd, 1988; Boudreau, 2012). The conduction of experiments and data evaluation/interpretation requires a profound process understanding and a high level of experience. The acquisition and preparation of adequate samples for laboratory experiments usually constitutes a major challenge and may have serious impact on the representativeness of the experimental results. Information on the success/failure rate of the sample preparation procedure should therefore be provided. Sample specimens “surviving” this procedure are subjected to various experimental protocols to derive information on their gas transport properties. The present overview first presents the theoretical background of gas diffusion and advective flow, each followed by a literature review (sections 2 and 3). Different experimental methods are described in sections 4.1 and 4.2. Details are provided on selected experiments performed at the Belgian Nuclear Research Centre (SCK-CEN, Belgium), Ecole Centrale de Lille (France), British Geological Survey (UK), and at RWTH-Aachen University (Germany) (section 4.3). Experimental data are discussed with respect to different petrophysical parameters outlined above: i) gas diffusion, ii) evolution of gas breakthrough, iii) dilation-controlled flow, and iv) effective gas permeability after breakthrough. These experiments were conducted under different pressure and temperature conditions, depending on sample type, burial depth and research focus (e.g. radioactive waste disposal, natural gas exploration, or carbon dioxide storage). The interpretation of the experimental results can be difficult and sometimes a clear discrimination between different mechanisms (and the controlling parameters) is not possible. This holds, for instance, for gas breakthrough experiments where the observed transport can be interpreted as intermittent, continuous, capillary- or dilation-controlled flow. Also, low gas flow rates through samples on the length-scale of centimetres can be equally explained by effective two-phase flow or diffusion of dissolved gas

New standards for reducing gravity data: The North American gravity database

The North American gravity database as well as databases from Canada, Mexico, and the United States are being revised to improve their coverage, versatility, and accuracy. An important part of this effort is revising procedures for calculating gravity anomalies, taking into account our enhanced computational power, improved terrain databases and datums, and increased interest in more accurately defining long-wavelength anomaly components. Users of the databases may note minor differences between previous and revised database values as a result of these procedures. Generally, the differences do not impact the interpretation of local anomalies but do improve regional anomaly studies. The most striking revision is the use of the internationally accepted terrestrial ellipsoid for the height datum of gravity stations rather than the conventionally used geoid or sea level. Principal facts of gravity observations and anomalies based on both revised and previous procedures together with germane metadata will be available on an interactive Web-based data system as well as from national agencies and data centers. The use of the revised procedures is encouraged for gravity data reduction because of the widespread use of the global positioning system in gravity fieldwork and the need for increased accuracy and precision of anomalies and consistency with North American and national databases. Anomalies based on the revised standards should be preceded by the adjective “ellipsoidal” to differentiate anomalies calculated using heights with respect to the ellipsoid from those based on conventional elevations referenced to the geoid

Volcanic and geochemical evolution of the Teno massif, Tenerife, Canary Islands: some repercussions of giant landslides on ocean island magmatism

Large-scale, catastrophic mass wasting is a major process contributing to the dismantling of oceanic intraplate volcanoes. Recent studies, however, have highlighted a possible feedback relationship between flank collapse, or incipient instability, and subsequent episodes of structural rearrangement and/or renewed volcano growth. The Teno massif, located in northwestern Tenerife (Canary Islands), is a deeply eroded Miocene shield volcano that was built in four major eruptive phases punctuated by two lateral collapses, each removing >20–25 km3 of the volcano's north flank. In this paper, we use detailed field observations and petrological and geochemical data to evaluate possible links between large-scale landslides and subsequent volcanism/magmatism during Teno's evolution. Inspection of key stratigraphic sequences reveals that steep angular unconformities, relics of paleolandslide scars, are marked by polymict breccias. Near their base, these deposits typically include abundant juvenile pyroclastic material, otherwise scarce in the region. While some of Teno's most evolved, low-density magmas were produced just before flank collapses, early postlandslide lava sequences are characterized by anomalously high proportions of dense ankaramite flows, extremely rich in clinopyroxene and olivine crystals. A detailed sampling profile shows transitions from low-Mg # lavas relatively rich in SiO2 to lavas with low silica content and comparatively high Mg # after both landslides. Long-term variations in Zr/Nb, normative nepheline, and La/Lu are coupled but do not show a systematic correlation with stratigraphic boundaries. We propose that whereas loading of the growing precollapse volcano promoted magma stagnation and differentiation, the successive giant landslides modified the shallow volcano-tectonic stress field at Teno, resulting in widespread pyroclastic eruptions and shallow magma reservoir drainage. This rapid unloading of several tens of km3 of near-surface rocks appears to have upset magma differentiation processes, while facilitating the remobilization and tapping of denser ankaramite magmas that were stored in the uppermost mantle. Degrees of mantle melting coincidently reached a maximum in the short time interval between the two landslides and declined shortly after, probably reflecting intrinsic plume processes rather than a collapse-induced influence on mantle melting. Our study of Teno volcano bears implications for other oceanic volcanoes where short-term compositional variations may also directly relate to major flank collapse events

The relationship between eruptive activity, flank collapse, and sea level at volcanic islands: A long-term (>1 Ma) record offshore Montserrat, Lesser Antilles

Hole U1395B, drilled southeast of Montserrat during Integrated Ocean Drilling Program Expedition 340, provides a long (>1 Ma) and detailed record of eruptive and mass-wasting events (>130 discrete events). This record can be used to explore the temporal evolution in volcanic activity and landslides at an arc volcano. Analysis of tephra fall and volcaniclastic turbidite deposits in the drill cores reveals three heightened periods of volcanic activity on the island of Montserrat (?930 ka to ?900 ka, ?810 ka to ?760 ka, and ?190 ka to ?120 ka) that coincide with periods of increased volcano instability and mass-wasting. The youngest of these periods marks the peak in activity at the Soufrière Hills volcano. The largest flank collapse of this volcano (?130 ka) occurred towards the end of this period, and two younger landslides also occurred during a period of relatively elevated volcanism. These three landslides represent the only large (>0.3 km3) flank collapses of the Soufrière Hills edifice, and their timing also coincides with periods of rapid sea-level rise (>5 m/ka). Available age data from other island arc volcanoes suggests a general correlation between the timing of large landslides and periods of rapid sea-level rise, but this is not observed for volcanoes in intra-plate ocean settings. We thus infer that rapid sea-level rise may modulate the timing of collapse at island arc volcanoes, but not in larger ocean-island settings

Dendritic Cell Based Tumor Vaccination in Prostate and Renal Cell Cancer: A Systematic Review and Meta-Analysis

BACKGROUND: More than 200 clinical trials have been performed using dendritic cells (DC) as cellular adjuvants in cancer. Yet the key question whether there is a link between immune and clinical response remains unanswered. Prostate and renal cell cancer (RCC) have been extensively studied for DC-based immunotherapeutic interventions and were therefore chosen to address the above question by means of a systematic review and meta-analysis. METHODOLOGY/PRINCIPAL FINDINGS: Data was obtained after a systematic literature search from clinical trials that enrolled at least 6 patients. Individual patient data meta-analysis was performed by means of conditional logistic regression grouped by study. Twenty nine trials involving a total of 906 patients were identified in prostate cancer (17) and RCC (12). Objective response rates were 7.7% in prostate cancer and 12.7% in RCC. The combined percentages of objective responses and stable diseases (SD) amounted to a clinical benefit rate (CBR) of 54% in prostate cancer and 48% in RCC. Meta-analysis of individual patient data (n = 403) revealed the cellular immune response to have a significant influence on CBR, both in prostate cancer (OR 10.6, 95% CI 2.5-44.1) and in RCC (OR 8.4, 95% CI 1.3-53.0). Furthermore, DC dose was found to have a significant influence on CBR in both entities. Finally, for the larger cohort of prostate cancer patients, an influence of DC maturity and DC subtype (density enriched versus monocyte derived DC) as well as access to draining lymph nodes on clinical outcome could be demonstrated. CONCLUSIONS/SIGNIFICANCE: As a 'proof of principle' a statistically significant effect of DC-mediated cellular immune response and of DC dose on CBR could be demonstrated. Further findings concerning vaccine composition, quality control, and the effect of DC maturation status are relevant for the immunological development of DC-based vaccines

Immune Cell Recruitment and Cell-Based System for Cancer Therapy

Immune cells, such as cytotoxic T lymphocytes, natural killer cells, B cells, and dendritic cells, have a central role in cancer immunotherapy. Conventional studies of cancer immunotherapy have focused mainly on the search for an efficient means to prime/activate tumor-associated antigen-specific immunity. A systematic understanding of the molecular basis of the trafficking and biodistribution of immune cells, however, is important for the development of more efficacious cancer immunotherapies. It is well established that the basis and premise of immunotherapy is the accumulation of effective immune cells in tumor tissues. Therefore, it is crucial to control the distribution of immune cells to optimize cancer immunotherapy. Recent characterization of various chemokines and chemokine receptors in the immune system has increased our knowledge of the regulatory mechanisms of the immune response and tolerance based on immune cell localization. Here, we review the immune cell recruitment and cell-based systems that can potentially control the systemic pharmacokinetics of immune cells and, in particular, focus on cell migrating molecules, i.e., chemokines, and their receptors, and their use in cancer immunotherapy