MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution

Panbiogeography represents an evolutionary approach to biogeography, using rational cost-efficient methods to reduce initial complexity to locality data, and depict general distribution patterns. However, few quantitative, and automated panbiogeographic methods exist. In this study, we propose a new algorithm, within a quantitative, geometrical framework, to perform panbiogeographical analyses as an alternative to more traditional methods. The algorithm first calculates a minimum spanning tree, an individual track for each species in a panbiogeographic context. Then the spatial congruence among segments of the minimum spanning trees is calculated using five congruence parameters, producing a general distribution pattern. In addition, the algorithm removes the ambiguity, and subjectivity often present in a manual panbiogeographic analysis. Results from two empirical examples using 61 species of the genus Bomarea (2340 records), and 1031 genera of both plants and animals (100118 records) distributed across the Northern Andes, demonstrated that a geometrical approach to panbiogeography is a feasible quantitative method to determine general distribution patterns for taxa, reducing complexity, and the time needed for managing large data sets

Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018.

Over the past decade, the Nomenclature Committee on Cell Death (NCCD) has formulated guidelines for the definition and interpretation of cell death from morphological, biochemical, and functional perspectives. Since the field continues to expand and novel mechanisms that orchestrate multiple cell death pathways are unveiled, we propose an updated classification of cell death subroutines focusing on mechanistic and essential (as opposed to correlative and dispensable) aspects of the process. As we provide molecularly oriented definitions of terms including intrinsic apoptosis, extrinsic apoptosis, mitochondrial permeability transition (MPT)-driven necrosis, necroptosis, ferroptosis, pyroptosis, parthanatos, entotic cell death, NETotic cell death, lysosome-dependent cell death, autophagy-dependent cell death, immunogenic cell death, cellular senescence, and mitotic catastrophe, we discuss the utility of neologisms that refer to highly specialized instances of these processes. The mission of the NCCD is to provide a widely accepted nomenclature on cell death in support of the continued development of the field

Molting while breeding? Lessons from New World Tyrannus Flycatchers

Songbirds must annually undergo two energetically demanding but important activities: breeding and feather molt. Due to the high energetic investment that each demands, these two events are generally not carried out simultaneously. However, substantial variation in the level of annual reproductive investment among populations may result in variation in molt-breeding overlap between them. With the goal of understanding whether different songbird populations overlap molt and breeding, and, if so, to determine directions for research on the potential tradeoffs involved, we describe the relationship between clutch size, molt, and energetic condition within a genus of New World Flycatchers (Tyrannus). Of 219 Flycatchers sampled, only one individual molted flight feathers while breeding, suggesting that molting flight feathers and breeding simultaneously is too energetically expensive at any clutch size. However, some Flycatchers molted body feathers during the breeding season. When we tested for an effect of clutch size, sex and energetic condition on body molt intensity during the breeding season, only clutch size and sex had significant effects, with a negative effect of clutch size on body molt intensity in males but not in females. Based on these results, we develop a set of hypotheses to guide future studies on the potential tradeoffs between investment in reproduction and molt.Fil: Jahn, Alex E.. Universidade Estadual Paulista; BrasilFil: Bejarano, Vanesa. Universidade Estadual Paulista; BrasilFil: Benavides Guzmán, Marcela. Universidade Estadual Paulista; BrasilFil: Brown, Leone M.. University of Georgia; Estados UnidosFil: Carvalho Provinciato, Ivan C.. Universidade Estadual Paulista; BrasilFil: Cereghetti, Joaquín. Universidad Nacional de La Pampa. Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Cueto, Víctor. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Centro de Investigación Esquel de Montaña y Estepa Patagóica. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Esquel. Centro de Investigación Esquel de Montaña y Estepa Patagónica; ArgentinaFil: Giraldo, José I.. Aves Internacionales-Colombia; ColombiaFil: Gómez Bahamón, Valentina. Universidad de los Andes; ColombiaFil: Husak, Michael S.. Cameron University; Estados UnidosFil: LePage, Heather K.. Oklahoma State University; Estados UnidosFil: MacPherson, Maggie. Tulane University; Estados UnidosFil: Marini, Miguel Ângelo. Universidade do Brasília; BrasilFil: Pizo, Marco Aurelio. Universidade Estadual Paulista; BrasilFil: Quickle, Aaron. Cameron University; Estados UnidosFil: Roeder, Diane V.. Cameron University; Estados UnidosFil: Sarasola, José Hernán. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Ciencias de la Tierra y Ambientales de La Pampa. Universidad Nacional de La Pampa. Facultad de Ciencias Exactas y Naturales. Instituto de Ciencias de la Tierra y Ambientales de La Pampa; Argentina. Universidad Nacional de La Pampa; ArgentinaFil: Tuero, Diego Tomas. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentin