Microbial-Induced Heterogeneity in the Acoustic Properties of Porous Media

It is not known how biofilms affect seismic wave propagation in porous media. Such knowledge is critical for assessing the utility of seismic techniques for imaging biofilm development and their effects in field settings. Acoustic wave data were acquired over a two-dimensional region of a microbial-stimulated sand column and an unstimulated sand column. The acoustic signals from the unstimulated column were relatively uniform over the 2D scan region. The data from the microbial-stimulated column exhibited a high degree of spatial heterogeneity in the acoustic wave amplitude, with some regions exhibiting significant increases in attenuation while others exhibited decreases. Environmental scanning electron microscopy showed differences in the structure of the biofilm between regions of increased and decreased acoustic wave amplitude. We conclude from these observations that variations in microbial growth and biofilm structure cause heterogeneity in the elastic properties of porous media with implications for the validation of bioclogging models

Microbial-Induced Heterogeneity in the Acoustic Properties of Porous Media

Abstract It is not known how biofilms affect seismic wave propagation in porous media. Such knowledge is critical for assessing the utility of seismic techniques for imaging biofilm development and their effects in field settings. Acoustic wave data were acquired over a two-dimensional region of a microbial-stimulated sand column and an unstimulated sand column. The acoustic signals from the unstimulated column were relatively uniform over the 2D scan region. The data from the microbial-stimulated column exhibited a high degree of spatial heterogeneity in the acoustic wave amplitude, with some regions exhibiting significant increases in attenuation while others exhibited decreases. Environmental scanning electron microscopy showed differences in the structure of the biofilm between regions of increased and decreased acoustic wave amplitude. We conclude from these observations that variations in microbial growth and biofilm structure cause heterogeneity in the elastic properties of porous media with implications for the validation of bioclogging models. INDEX TERMS: 5102 Acoustic properties, 0416 Biogeophysics, 0463 Microbe/mineral interactions

EMSL Pore Scale Modeling Challenge/Workshop

Report covers the background for the workshop, objectives, important research directions, necessary capabilities and overall recommendations

Analysis of fracture induced scattering of microseismic shear-waves

Fractures are pervasive features within the Earth’s crust and have a significant influence on the multi-physical response of the subsurface. The presence of coherent fracture sets often leads to observable seismic scattering enabling seismic techniques to remotely locate and characterise fracture systems. In this study, we confirm the general scale-dependence of seismic scattering and provide new results specific to shear-wave propagation. We do this by generating full waveform synthetics using finite-difference wave simulation within an isotropic background model containing explicit fractures. By considering a suite of fracture models having variable fracture density and fracture size, we examine the widening effect of wavelets due to scattering within a fractured medium by using several different approaches, such as root-mean-square envelope analysis, shear-wave polarisation distortion, differential attenuation analysis and peak frequency shifting. The analysis allows us to assess the scattering behavior of parametrised models in which the propagation direction is either normal or parallel to the fracture surfaces. The quantitative measures show strong observable deviations for fractures size on the order of or greater than the dominant seismic wavelength within the Mie and geometric scattering regime for both propagation normal and parallel to fracture strike. The results suggest that strong scattering is symptomatic of fractures having size on the same order of the probing seismic wave

Quantifying fracture geometry with X-ray tomography: Technique of Iterative Local Thresholding (TILT) for 3D image segmentation

This paper presents a new method—the Technique of Iterative Local Thresholding (TILT)—for processing 3D X-ray computed tomography (xCT) images for visualization and quantification of rock fractures. The TILT method includes the following advancements. First, custom masks are generated by a fracture-dilation procedure, which significantly amplifies the fracture signal on the intensity histogram used for local thresholding. Second, TILT is particularly well suited for fracture characterization in granular rocks because the multi-scale Hessian fracture (MHF) filter has been incorporated to distinguish fractures from pores in the rock matrix. Third, TILT wraps the thresholding and fracture isolation steps in an optimized iterative routine for binary segmentation, minimizing human intervention and enabling automated processing of large 3D datasets. As an illustrative example, we applied TILT to 3D xCT images of reacted and unreacted fractured limestone cores. Other segmentation methods were also applied to provide insights regarding variability in image processing. The results show that TILT significantly enhanced separability of grayscale intensities, outperformed the other methods in automation, and was successful in isolating fractures from the porous rock matrix. Because the other methods are more likely to misclassify fracture edges as void and/or have limited capacity in distinguishing fractures from pores, those methods estimated larger fracture volumes (up to 80 %), surface areas (up to 60 %), and roughness (up to a factor of 2). These differences in fracture geometry would lead to significant disparities in hydraulic permeability predictions, as determined by 2D flow simulations

Acoustic and electrical property changes due to microbial growth and biofilm formation in porous media

A laboratory study was conducted to investigate the effect of microbial growth and biofilm formation on compressional waves, and complex conductivity during stimulated microbial growth. Over the 29 day duration of the experiment, compressional wave amplitudes and arrival times for the control (nonbiostimulated) sample were observed to be relatively uniform over the scanned 2-D region. However, the biostimulated sample exhibited a high degree of spatial variability in both the amplitude and arrival times, with portions of the sample exhibiting increased attenuation (similar to 80%) concurrent with an increase in the arrival times, while other portions exhibited decreased attenuation (similar to 45%) and decreased arrival times. The acoustic amplitude and arrival times changed significantly in the biostimulated column between days 5 and 7 of the experiment, consistent with a peak in the imaginary conductivity (sigma \u27\u27) values. The sigma \u27\u27 response is interpreted as recording the different stages of biofilm development with peak sigma \u27\u27 representing maximum biofilm thickness and decreasing sigma \u27\u27 representing cell death or detachment. Environmental scanning electron microscope imaging confirmed microbial cell attachment to sand surfaces and showed apparent differences in the morphology of attached biomass between regions of increased and decreased attenuation. The heterogeneity in the elastic properties arises from the differences in the morphology and structure of attached biofilms. These results suggest that combining acoustic imaging and complex conductivity techniques can provide a powerful tool for assessing microbial growth or biofilm formation and the associated changes in porous media, such as those that occur during bioremediation and microbial enhanced oil recovery